RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 RNF20Q5VTR2 975 aa11.37□□□□□ -0.59
RABGGTA-221ENST00000561055 GADL1Q6ZQY3 521 aa11.37□□□□□ -0.59
RABGGTA-221ENST00000561055 DGKHQ86XP1 1220 aa11.37□□□□□ -0.59
RABGGTA-221ENST00000561055 CLEC10AQ8IUN9 316 aa11.37□□□□□ -0.59
RABGGTA-221ENST00000561055 NKX2-3Q8TAU0 364 aa11.37□□□□□ -0.59
RABGGTA-221ENST00000561055 MTA3Q9BTC8 594 aa11.37□□□□□ -0.59
RABGGTA-221ENST00000561055 VCPKMTQ9H867 229 aa11.37□□□□□ -0.59
RABGGTA-221ENST00000561055 CLIP2Q9UDT6 1046 aa11.37□□□□□ -0.59
RABGGTA-221ENST00000561055 ADGRA2Q96PE1 1338 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 B4E1Z4 1266 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 TLR2O60603 784 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 KDM4AO75164 1064 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 HSPA4P34932 840 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 CTCFP49711 727 aaPredicted RBP11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 TRDNQ13061 729 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 CRHR2Q13324 411 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 TAF1CQ15572 869 aaPredicted RBP11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 RRP12Q5JTH9 1297 aaKnown RBP11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 KIAA1755Q5JYT7 1200 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 RCSD1Q6JBY9 416 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 CATSPERGQ6ZRH7 1159 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 STOX1Q6ZVD7 989 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 IQCA1Q86XH1 822 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 GMCL1P1Q8NEA9 526 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 NCOA7Q8NI08 942 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 FEZ1Q99689 392 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 USP26Q9BXU7 913 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 ZFYVE28Q9HCC9 887 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 GOPCQ9HD26 462 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 TOMM22Q9NS69 142 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 PNMA3Q9UL41 463 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 TAF6LQ9Y6J9 622 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 SMCHD1A6NHR9 2005 aa11.36□□□□□ -0.59
RABGGTA-221ENST00000561055 USP17L15C9J2P7 530 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 USP17L13C9JLJ4 530 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 USP17L11C9JVI0 530 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 USP17L18D6R9N7 530 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 USP17L22D6RA61 530 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 USP17L17D6RBQ6 530 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 USP17L19D6RCP7 530 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 USP17L20D6RJB6 530 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 F5H6K3 240 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 WDR46O15213 610 aaKnown RBP11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 NMT2O60551 498 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 TBC1D8O95759 1140 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 HSPA8P11142 646 aaKnown RBP11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 VCAM1P19320 739 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 KLRC3Q07444 240 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 USP17L24Q0WX57 530 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 DGKZQ13574 1117 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 C17orf99Q6UX52 265 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 LBX2Q6XYB7 198 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 MB21D2Q8IYB1 491 aaPredicted RBP11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 PARK7Q99497 189 aaKnown RBP11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 R3HDMLQ9H3Y0 253 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 MYPNQ86TC9 1320 aa11.35□□□□□ -0.59
RABGGTA-221ENST00000561055 GPR25O00155 361 aa11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 TOP1P11387 765 aaKnown RBP11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 ZKSCAN1P17029 563 aaPredicted RBP11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 OSBPP22059 807 aa11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 GCLCP48506 637 aaPredicted RBP11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 KRT32Q14532 448 aa11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 SEC23AQ15436 765 aa11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 ZYXQ15942 572 aaKnown RBP11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 CYB5R4Q7L1T6 521 aa11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 RASEFQ8IZ41 740 aa11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 GTF3C2Q8WUA4 911 aaPredicted RBP11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 ZSCAN10Q96SZ4 725 aaPredicted RBP11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 TMEM47Q9BQJ4 181 aa11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 ASCC2Q9H1I8 757 aaPredicted RBP11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 PRDM10Q9NQV6 1147 aa11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 ZSWIM8A7E2V4 1837 aa11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 WDR19Q8NEZ3 1342 aa11.34□□□□□ -0.59
RABGGTA-221ENST00000561055 PLXNB2O15031 1838 aa11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 PLA2G6O60733 806 aa11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 NDUFB10O96000 172 aa11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 BCRP11274 1271 aa11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 ATP2B2Q01814 1243 aa11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 COG2Q14746 738 aa11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 C8orf34Q49A92 452 aa11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 RALYLQ86SE5 291 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 ENAHQ8N8S7 591 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 IL17RAQ96F46 866 aa11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 GMCL1Q96IK5 515 aa11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 P2RX7Q99572 595 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 RPAP3Q9H6T3 665 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 HOXC10Q9NYD6 342 aa11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 MORF4L1Q9UBU8 362 aa11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 ADAMTS5Q9UNA0 930 aa11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 STX8Q9UNK0 236 aa11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 TNKSO95271 1327 aa11.33□□□□□ -0.6
RABGGTA-221ENST00000561055 HMGB1P09429 215 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-221ENST00000561055 SNHG28P0DPA3 235 aa11.32□□□□□ -0.6
RABGGTA-221ENST00000561055 CYP2C8P10632 490 aa11.32□□□□□ -0.6
RABGGTA-221ENST00000561055 MCM5P33992 734 aa11.32□□□□□ -0.6
RABGGTA-221ENST00000561055 ANTXR2P58335 489 aa11.32□□□□□ -0.6
RABGGTA-221ENST00000561055 HERVK_113P62684 666 aa11.32□□□□□ -0.6
RABGGTA-221ENST00000561055 IRX3P78415 501 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-221ENST00000561055 POTEEQ6S8J3 1075 aa11.32□□□□□ -0.6
RABGGTA-221ENST00000561055 IGDCC4Q8TDY8 1250 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms