RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 SLC35G1Q2M3R5 365 aa25.97■■□□□ 1.75
SNX22-205ENST00000560945 SIAH1Q8IUQ4 282 aa25.97■■□□□ 1.75
SNX22-205ENST00000560945 CNTNAP5Q8WYK1 1306 aa25.96■■□□□ 1.75
SNX22-205ENST00000560945 EEF2P13639 858 aaKnown RBP25.96■■□□□ 1.75
SNX22-205ENST00000560945 PPP2R5BQ15173 497 aa25.96■■□□□ 1.75
SNX22-205ENST00000560945 FAM173BQ6P4H8 233 aa25.96■■□□□ 1.75
SNX22-205ENST00000560945 KIF3AQ9Y496 699 aa25.96■■□□□ 1.75
SNX22-205ENST00000560945 USP17L5A8MUK1 530 aa25.95■■□□□ 1.75
SNX22-205ENST00000560945 NBPF12Q5TAG4 269 aaPredicted RBP25.95■■□□□ 1.75
SNX22-205ENST00000560945 USP17L2Q6R6M4 530 aa25.95■■□□□ 1.75
SNX22-205ENST00000560945 TMEM179Q6ZVK1 233 aa25.95■■□□□ 1.75
SNX22-205ENST00000560945 C8orf76Q96K31 380 aa25.95■■□□□ 1.75
SNX22-205ENST00000560945 GBP4Q96PP9 640 aa25.95■■□□□ 1.75
SNX22-205ENST00000560945 CPVLQ9H3G5 476 aa25.95■■□□□ 1.75
SNX22-205ENST00000560945 TBC1D12O60347 775 aa25.95■■□□□ 1.74
SNX22-205ENST00000560945 LMOD1P29536 600 aaPredicted RBP25.95■■□□□ 1.74
SNX22-205ENST00000560945 MCTP1Q6DN14 999 aa25.95■■□□□ 1.74
SNX22-205ENST00000560945 PIBF1Q8WXW3 757 aa25.95■■□□□ 1.74
SNX22-205ENST00000560945 MAP3K10Q02779 954 aa25.94■■□□□ 1.74
SNX22-205ENST00000560945 RESTQ13127 1097 aa25.94■■□□□ 1.74
SNX22-205ENST00000560945 MAP3K14Q99558 947 aa25.94■■□□□ 1.74
SNX22-205ENST00000560945 ADARB2Q9NS39 739 aaKnown RBP25.94■■□□□ 1.74
SNX22-205ENST00000560945 V9GY48 417 aaPredicted RBP25.94■■□□□ 1.74
SNX22-205ENST00000560945 PALM3A6NDB9 673 aaPredicted RBP25.93■■□□□ 1.74
SNX22-205ENST00000560945 ICA1Q05084 483 aa25.93■■□□□ 1.74
SNX22-205ENST00000560945 PKN1Q16512 942 aa25.93■■□□□ 1.74
SNX22-205ENST00000560945 DLK2Q6UY11 383 aa25.93■■□□□ 1.74
SNX22-205ENST00000560945 SHISA4Q96DD7 197 aa25.93■■□□□ 1.74
SNX22-205ENST00000560945 FRMPD2Q68DX3 1309 aaPredicted RBP25.93■■□□□ 1.74
SNX22-205ENST00000560945 PDHBP11177 359 aa25.93■■□□□ 1.74
SNX22-205ENST00000560945 KIF5BP33176 963 aa25.93■■□□□ 1.74
SNX22-205ENST00000560945 APOBEC3FQ8IUX4 373 aaKnown RBP25.93■■□□□ 1.74
SNX22-205ENST00000560945 TRIM22Q8IYM9 498 aa25.93■■□□□ 1.74
SNX22-205ENST00000560945 FBXO18Q8NFZ0 1043 aa25.93■■□□□ 1.74
SNX22-205ENST00000560945 RNF26Q9BY78 433 aaPredicted RBP25.93■■□□□ 1.74
SNX22-205ENST00000560945 KANSL2Q9H9L4 492 aa25.93■■□□□ 1.74
SNX22-205ENST00000560945 FZD1Q9UP38 647 aa25.93■■□□□ 1.74
SNX22-205ENST00000560945 DPY19L2Q6NUT2 758 aa25.92■■□□□ 1.74
SNX22-205ENST00000560945 NYAP2Q9P242 653 aa25.92■■□□□ 1.74
SNX22-205ENST00000560945 PRPF3O43395 683 aaKnown RBP25.91■■□□□ 1.74
SNX22-205ENST00000560945 CYTH3O43739 400 aa25.91■■□□□ 1.74
SNX22-205ENST00000560945 DEXIO95424 95 aa25.91■■□□□ 1.74
SNX22-205ENST00000560945 VEGFAP15692 232 aaPredicted RBP25.91■■□□□ 1.74
SNX22-205ENST00000560945 CCDC84Q86UT8 332 aaPredicted RBP25.91■■□□□ 1.74
SNX22-205ENST00000560945 CABP5Q9NP86 173 aa25.91■■□□□ 1.74
SNX22-205ENST00000560945 ZBTB21Q9ULJ3 1066 aa25.91■■□□□ 1.74
SNX22-205ENST00000560945 PHF20L1A8MW92 1017 aa25.91■■□□□ 1.74
SNX22-205ENST00000560945 PARP1P09874 1014 aaKnown RBP25.91■■□□□ 1.74
SNX22-205ENST00000560945 KRT40Q6A162 431 aa25.91■■□□□ 1.74
SNX22-205ENST00000560945 L3MBTL3Q96JM7 780 aaPredicted RBP25.91■■□□□ 1.74
SNX22-205ENST00000560945 GDPD2Q9HCC8 539 aa25.91■■□□□ 1.74
SNX22-205ENST00000560945 A0A1W2PRG0 241 aa25.9■■□□□ 1.74
SNX22-205ENST00000560945 DNM1Q05193 864 aaKnown RBP25.9■■□□□ 1.74
SNX22-205ENST00000560945 ZC3H4Q9UPT8 1303 aaKnown RBP25.9■■□□□ 1.74
SNX22-205ENST00000560945 KIF28PB7ZC32 967 aa25.89■■□□□ 1.74
SNX22-205ENST00000560945 KLRF2D3W0D1 207 aa25.89■■□□□ 1.74
SNX22-205ENST00000560945 SNHG28P0DPA3 235 aa25.89■■□□□ 1.74
SNX22-205ENST00000560945 PDIA4P13667 645 aaKnown RBP25.89■■□□□ 1.74
SNX22-205ENST00000560945 CAP2P40123 477 aa25.89■■□□□ 1.74
SNX22-205ENST00000560945 MKL1Q969V6 931 aa25.89■■□□□ 1.74
SNX22-205ENST00000560945 UBA5Q9GZZ9 404 aa25.89■■□□□ 1.74
SNX22-205ENST00000560945 KCNJ14Q9UNX9 436 aa25.89■■□□□ 1.74
SNX22-205ENST00000560945 CNPY2Q9Y2B0 182 aa25.89■■□□□ 1.74
SNX22-205ENST00000560945 GLTPD2A6NH11 291 aa25.88■■□□□ 1.73
SNX22-205ENST00000560945 GPCPD1Q9NPB8 672 aa25.88■■□□□ 1.73
SNX22-205ENST00000560945 MYH4Q9Y623 1939 aa25.88■■□□□ 1.73
SNX22-205ENST00000560945 RAD21O60216 631 aa25.88■■□□□ 1.73
SNX22-205ENST00000560945 ECE1P42892 770 aa25.88■■□□□ 1.73
SNX22-205ENST00000560945 AKAP17AQ02040 695 aaKnown RBP25.88■■□□□ 1.73
SNX22-205ENST00000560945 ACER1Q8TDN7 264 aa25.88■■□□□ 1.73
SNX22-205ENST00000560945 VPS54Q9P1Q0 977 aa25.87■■□□□ 1.73
SNX22-205ENST00000560945 SSC5DA1L4H1 1573 aa25.87■■□□□ 1.73
SNX22-205ENST00000560945 GNAQP50148 359 aa25.86■■□□□ 1.73
SNX22-205ENST00000560945 TTBK2Q6IQ55 1244 aa25.86■■□□□ 1.73
SNX22-205ENST00000560945 WASF1Q92558 559 aa25.86■■□□□ 1.73
SNX22-205ENST00000560945 POTECB2RU33 542 aa25.86■■□□□ 1.73
SNX22-205ENST00000560945 ADM5C9JUS6 153 aa25.86■■□□□ 1.73
SNX22-205ENST00000560945 EPHX2P34913 555 aa25.86■■□□□ 1.73
SNX22-205ENST00000560945 KIF23Q02241 960 aaPredicted RBP25.86■■□□□ 1.73
SNX22-205ENST00000560945 ZNF543Q08ER8 600 aa25.86■■□□□ 1.73
SNX22-205ENST00000560945 KCTD1Q719H9 257 aa25.86■■□□□ 1.73
SNX22-205ENST00000560945 GLIS2Q9BZE0 524 aaPredicted RBP25.86■■□□□ 1.73
SNX22-205ENST00000560945 NCLP19338 710 aaKnown RBP25.85■■□□□ 1.73
SNX22-205ENST00000560945 INPP5BP32019 993 aa25.85■■□□□ 1.73
SNX22-205ENST00000560945 PPP4R3BQ5MIZ7 849 aa25.85■■□□□ 1.73
SNX22-205ENST00000560945 DDX11L8A8MPP1 907 aa25.84■■□□□ 1.73
SNX22-205ENST00000560945 CCDC96Q2M329 555 aa25.84■■□□□ 1.73
SNX22-205ENST00000560945 ASPRV1Q53RT3 343 aa25.84■■□□□ 1.73
SNX22-205ENST00000560945 KIAA1755Q5JYT7 1200 aa25.84■■□□□ 1.73
SNX22-205ENST00000560945 SLFN13Q68D06 897 aa25.84■■□□□ 1.73
SNX22-205ENST00000560945 NUP88Q99567 741 aaPredicted RBP25.84■■□□□ 1.73
SNX22-205ENST00000560945 VAT1LQ9HCJ6 419 aa25.84■■□□□ 1.73
SNX22-205ENST00000560945 PITPNM2Q9BZ72 1349 aa25.84■■□□□ 1.73
SNX22-205ENST00000560945 F5H6K3 240 aa25.84■■□□□ 1.73
SNX22-205ENST00000560945 KLRC3Q07444 240 aa25.84■■□□□ 1.73
SNX22-205ENST00000560945 TRIM29Q14134 588 aa25.84■■□□□ 1.73
SNX22-205ENST00000560945 GPKOWQ92917 476 aaPredicted RBP eCLIP25.84■■□□□ 1.73
SNX22-205ENST00000560945 ZSCAN16Q9H4T2 348 aaPredicted RBP25.84■■□□□ 1.73
SNX22-205ENST00000560945 LMBRD1Q9NUN5 540 aa25.84■■□□□ 1.73
SNX22-205ENST00000560945 TFIP11Q9UBB9 837 aaKnown RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms