RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 ZNF365Q70YC5 407 aa11.82□□□□□ -0.52
HERC1-210ENST00000560897 ANKRD44Q8N8A2 993 aa11.82□□□□□ -0.52
HERC1-210ENST00000560897 CEP126Q9P2H0 1117 aa11.82□□□□□ -0.52
HERC1-210ENST00000560897 PRRC2BQ5JSZ5 2229 aaKnown RBP11.82□□□□□ -0.52
HERC1-210ENST00000560897 CACNA1AO00555 2505 aa11.82□□□□□ -0.52
HERC1-210ENST00000560897 SMCHD1A6NHR9 2005 aa11.81□□□□□ -0.52
HERC1-210ENST00000560897 TLL1O43897 1013 aa11.81□□□□□ -0.52
HERC1-210ENST00000560897 VAMP4O75379 141 aa11.81□□□□□ -0.52
HERC1-210ENST00000560897 CSF2RAP15509 400 aa11.81□□□□□ -0.52
HERC1-210ENST00000560897 MECOMQ03112 1051 aa11.81□□□□□ -0.52
HERC1-210ENST00000560897 CATSPERGQ6ZRH7 1159 aa11.81□□□□□ -0.52
HERC1-210ENST00000560897 HLA-CQ95604 372 aa11.81□□□□□ -0.52
HERC1-210ENST00000560897 KCNH6Q9H252 994 aa11.81□□□□□ -0.52
HERC1-210ENST00000560897 TBX21Q9UL17 535 aa11.81□□□□□ -0.52
HERC1-210ENST00000560897 YBX2Q9Y2T7 364 aaKnown RBP11.81□□□□□ -0.52
HERC1-210ENST00000560897 TLR3O15455 904 aaKnown RBP11.8□□□□□ -0.52
HERC1-210ENST00000560897 IGHA2P01877 340 aa11.8□□□□□ -0.52
HERC1-210ENST00000560897 CCDC102BQ68D86 513 aa11.8□□□□□ -0.52
HERC1-210ENST00000560897 ATF7IPQ6VMQ6 1270 aa11.8□□□□□ -0.52
HERC1-210ENST00000560897 LBX2Q6XYB7 198 aa11.8□□□□□ -0.52
HERC1-210ENST00000560897 C16orf59Q7L2K0 433 aa11.8□□□□□ -0.52
HERC1-210ENST00000560897 C12orf42Q96LP6 360 aa11.8□□□□□ -0.52
HERC1-210ENST00000560897 TSEN34Q9BSV6 310 aaKnown RBP11.8□□□□□ -0.52
HERC1-210ENST00000560897 PPP1R12CQ9BZL4 782 aa11.8□□□□□ -0.52
HERC1-210ENST00000560897 BTBD7Q9P203 1132 aa11.8□□□□□ -0.52
HERC1-210ENST00000560897 NRBP1Q9UHY1 535 aa11.8□□□□□ -0.52
HERC1-210ENST00000560897 IL16Q14005 1332 aa11.8□□□□□ -0.52
HERC1-210ENST00000560897 PDS5AQ29RF7 1337 aaKnown RBP11.8□□□□□ -0.52
HERC1-210ENST00000560897 FANCIQ9NVI1 1328 aa11.8□□□□□ -0.52
HERC1-210ENST00000560897 MOXD2PA6NHM9 499 aa11.79□□□□□ -0.52
HERC1-210ENST00000560897 FGBP02675 491 aa11.79□□□□□ -0.52
HERC1-210ENST00000560897 HLA-DOAP06340 250 aa11.79□□□□□ -0.52
HERC1-210ENST00000560897 ALADP13716 330 aa11.79□□□□□ -0.52
HERC1-210ENST00000560897 AKR1A1P14550 325 aa11.79□□□□□ -0.52
HERC1-210ENST00000560897 VCAM1P19320 739 aa11.79□□□□□ -0.52
HERC1-210ENST00000560897 RASGRF1Q13972 1273 aa11.79□□□□□ -0.52
HERC1-210ENST00000560897 FOXP4Q8IVH2 680 aaPredicted RBP11.79□□□□□ -0.52
HERC1-210ENST00000560897 KHSRPQ92945 711 aaKnown RBP eCLIP11.79□□□□□ -0.52
HERC1-210ENST00000560897 VTI1AQ96AJ9 217 aa11.79□□□□□ -0.52
HERC1-210ENST00000560897 GLT1D1Q96MS3 346 aa11.79□□□□□ -0.52
HERC1-210ENST00000560897 SIL1Q9H173 461 aa11.79□□□□□ -0.52
HERC1-210ENST00000560897 IL23AQ9NPF7 189 aa11.79□□□□□ -0.52
HERC1-210ENST00000560897 SPDYE16A6NNV3 312 aaPredicted RBP11.78□□□□□ -0.52
HERC1-210ENST00000560897 COBLO75128 1261 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 ERCC3P19447 782 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 SSTR3P32745 418 aaPredicted RBP11.78□□□□□ -0.52
HERC1-210ENST00000560897 ACLYP53396 1101 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 FOXK2Q01167 660 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 CCDC27Q2M243 656 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 NCAPG2Q86XI2 1143 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 WWC1Q8IX03 1113 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 SHCBP1Q8NEM2 672 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 MAML3Q96JK9 1138 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 FBXL18Q96ME1 805 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 MOV10L1Q9BXT6 1211 aaKnown RBP11.78□□□□□ -0.52
HERC1-210ENST00000560897 SPATC1LQ9H0A9 340 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 RAI14Q9P0K7 980 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 FBXO3Q9UK99 471 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 PCDHA11Q9Y5I1 949 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 MTCH2Q9Y6C9 303 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 SLC4A7Q9Y6M7 1214 aa11.78□□□□□ -0.52
HERC1-210ENST00000560897 SIPA1L1O43166 1804 aa11.77□□□□□ -0.52
HERC1-210ENST00000560897 ZBBXA8MT70 800 aa11.77□□□□□ -0.53
HERC1-210ENST00000560897 ZBTB22O15209 634 aa11.77□□□□□ -0.53
HERC1-210ENST00000560897 BAG3O95817 575 aa11.77□□□□□ -0.53
HERC1-210ENST00000560897 GH2P01242 217 aa11.77□□□□□ -0.53
HERC1-210ENST00000560897 PLCG2P16885 1265 aa11.77□□□□□ -0.53
HERC1-210ENST00000560897 RABGGTBP53611 331 aa11.77□□□□□ -0.53
HERC1-210ENST00000560897 JAG1P78504 1218 aa11.77□□□□□ -0.53
HERC1-210ENST00000560897 EXOSC9Q06265 439 aaKnown RBP11.77□□□□□ -0.53
HERC1-210ENST00000560897 PLS1Q14651 629 aa11.77□□□□□ -0.53
HERC1-210ENST00000560897 RAB3GAP1Q15042 981 aa11.77□□□□□ -0.53
HERC1-210ENST00000560897 SHROOM1Q2M3G4 852 aaPredicted RBP11.77□□□□□ -0.53
HERC1-210ENST00000560897 OTOP2Q7RTS6 562 aa11.77□□□□□ -0.53
HERC1-210ENST00000560897 ABRAQ8N0Z2 381 aa11.77□□□□□ -0.53
HERC1-210ENST00000560897 MROH8Q9H579 483 aa11.77□□□□□ -0.53
HERC1-210ENST00000560897 RPAP3Q9H6T3 665 aaPredicted RBP11.77□□□□□ -0.53
HERC1-210ENST00000560897 CNPY2Q9Y2B0 182 aa11.77□□□□□ -0.53
HERC1-210ENST00000560897 CHD9Q3L8U1 2897 aa11.77□□□□□ -0.53
HERC1-210ENST00000560897 ROBO3Q96MS0 1386 aa11.77□□□□□ -0.53
HERC1-210ENST00000560897 CIAO1O76071 339 aa11.76□□□□□ -0.53
HERC1-210ENST00000560897 FCER1AP12319 257 aa11.76□□□□□ -0.53
HERC1-210ENST00000560897 ADORA1P30542 326 aa11.76□□□□□ -0.53
HERC1-210ENST00000560897 ATG9AQ7Z3C6 839 aa11.76□□□□□ -0.53
HERC1-210ENST00000560897 MAPKAPK5Q8IW41 473 aa11.76□□□□□ -0.53
HERC1-210ENST00000560897 GJD3Q8N144 294 aa11.76□□□□□ -0.53
HERC1-210ENST00000560897 SH3RF3Q8TEJ3 882 aaPredicted RBP11.76□□□□□ -0.53
HERC1-210ENST00000560897 NSUN4Q96CB9 384 aaKnown RBP11.76□□□□□ -0.53
HERC1-210ENST00000560897 DNAJC18Q9H819 358 aa11.76□□□□□ -0.53
HERC1-210ENST00000560897 HOXC10Q9NYD6 342 aa11.76□□□□□ -0.53
HERC1-210ENST00000560897 ELP1O95163 1332 aa11.76□□□□□ -0.53
HERC1-210ENST00000560897 CDK5RAP2Q96SN8 1893 aa11.76□□□□□ -0.53
HERC1-210ENST00000560897 CHD7Q9P2D1 2997 aa11.76□□□□□ -0.53
HERC1-210ENST00000560897 A0A0U1RQG5 324 aaPredicted RBP11.75□□□□□ -0.53
HERC1-210ENST00000560897 ST18O60284 1047 aa11.75□□□□□ -0.53
HERC1-210ENST00000560897 ADAMTS4O75173 837 aa11.75□□□□□ -0.53
HERC1-210ENST00000560897 MYOGP15173 224 aa11.75□□□□□ -0.53
HERC1-210ENST00000560897 POU3F3P20264 500 aaPredicted RBP11.75□□□□□ -0.53
HERC1-210ENST00000560897 IL15P40933 162 aaPredicted RBP11.75□□□□□ -0.53
HERC1-210ENST00000560897 RFX5P48382 616 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms