RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 MKL1Q969V6 931 aa18.14■□□□□ 0.49
SNRPA1-213ENST00000560856 CEP95Q96GE4 821 aa18.14■□□□□ 0.49
SNRPA1-213ENST00000560856 RPAP3Q9H6T3 665 aaPredicted RBP18.14■□□□□ 0.49
SNRPA1-213ENST00000560856 TXNRD2Q9NNW7 524 aa18.14■□□□□ 0.49
SNRPA1-213ENST00000560856 MTMR4Q9NYA4 1195 aa18.14■□□□□ 0.49
SNRPA1-213ENST00000560856 RBPJLQ9UBG7 517 aa18.14■□□□□ 0.49
SNRPA1-213ENST00000560856 MORF4L1Q9UBU8 362 aa18.14■□□□□ 0.49
SNRPA1-213ENST00000560856 PTPN22Q9Y2R2 807 aa18.14■□□□□ 0.49
SNRPA1-213ENST00000560856 RAD50Q92878 1312 aa18.14■□□□□ 0.49
SNRPA1-213ENST00000560856 SGSM2O43147 1006 aa18.13■□□□□ 0.49
SNRPA1-213ENST00000560856 BMP2KLQ5H9B9 411 aa18.13■□□□□ 0.49
SNRPA1-213ENST00000560856 TBC1D10CQ8IV04 446 aa18.13■□□□□ 0.49
SNRPA1-213ENST00000560856 LPAR1Q92633 364 aa18.13■□□□□ 0.49
SNRPA1-213ENST00000560856 SH2D4AQ9H788 454 aa18.13■□□□□ 0.49
SNRPA1-213ENST00000560856 IL17RBQ9NRM6 502 aa18.13■□□□□ 0.49
SNRPA1-213ENST00000560856 CNMDO75829 334 aa18.12■□□□□ 0.49
SNRPA1-213ENST00000560856 NOVP48745 357 aa18.12■□□□□ 0.49
SNRPA1-213ENST00000560856 ATP2B2Q01814 1243 aa18.12■□□□□ 0.49
SNRPA1-213ENST00000560856 KIF22Q14807 665 aa18.12■□□□□ 0.49
SNRPA1-213ENST00000560856 ARHGEF6Q15052 776 aa18.12■□□□□ 0.49
SNRPA1-213ENST00000560856 LBX2Q6XYB7 198 aa18.12■□□□□ 0.49
SNRPA1-213ENST00000560856 SPICE1Q8N0Z3 855 aa18.12■□□□□ 0.49
SNRPA1-213ENST00000560856 RUFY2Q8WXA3 655 aa18.12■□□□□ 0.49
SNRPA1-213ENST00000560856 CLIP2Q9UDT6 1046 aa18.12■□□□□ 0.49
SNRPA1-213ENST00000560856 HPS5Q9UPZ3 1129 aa18.12■□□□□ 0.49
SNRPA1-213ENST00000560856 RLFQ13129 1914 aa18.11■□□□□ 0.49
SNRPA1-213ENST00000560856 DOCK3Q8IZD9 2030 aa18.11■□□□□ 0.49
SNRPA1-213ENST00000560856 ECM2O94769 699 aaPredicted RBP18.11■□□□□ 0.49
SNRPA1-213ENST00000560856 GNRH1P01148 92 aa18.11■□□□□ 0.49
SNRPA1-213ENST00000560856 TSPY3P0CV98 308 aa18.11■□□□□ 0.49
SNRPA1-213ENST00000560856 TSPY8P0CW00 308 aa18.11■□□□□ 0.49
SNRPA1-213ENST00000560856 PTH1RQ03431 593 aa18.11■□□□□ 0.49
SNRPA1-213ENST00000560856 Q3C1V9 767 aa18.11■□□□□ 0.49
SNRPA1-213ENST00000560856 AKNAD1Q5T1N1 836 aa18.11■□□□□ 0.49
SNRPA1-213ENST00000560856 STAG1Q8WVM7 1258 aa18.11■□□□□ 0.49
SNRPA1-213ENST00000560856 PPP4R2Q9NY27 417 aa18.11■□□□□ 0.49
SNRPA1-213ENST00000560856 SRRDQ9UH36 339 aa18.11■□□□□ 0.49
SNRPA1-213ENST00000560856 SPDYE16A6NNV3 312 aaPredicted RBP18.1■□□□□ 0.49
SNRPA1-213ENST00000560856 WDR46O15213 610 aaKnown RBP18.1■□□□□ 0.49
SNRPA1-213ENST00000560856 NMT2O60551 498 aa18.1■□□□□ 0.49
SNRPA1-213ENST00000560856 GTF3C2Q8WUA4 911 aaPredicted RBP18.1■□□□□ 0.49
SNRPA1-213ENST00000560856 F5H6K3 240 aa18.09■□□□□ 0.49
SNRPA1-213ENST00000560856 ZNF213O14771 459 aa18.09■□□□□ 0.49
SNRPA1-213ENST00000560856 RANBP6O60518 1105 aaKnown RBP18.09■□□□□ 0.49
SNRPA1-213ENST00000560856 FMNL1O95466 1100 aaPredicted RBP18.09■□□□□ 0.49
SNRPA1-213ENST00000560856 TTLL1O95922 423 aa18.09■□□□□ 0.49
SNRPA1-213ENST00000560856 NDUFB10O96000 172 aa18.09■□□□□ 0.49
SNRPA1-213ENST00000560856 PCP11498 1178 aaKnown RBP18.09■□□□□ 0.49
SNRPA1-213ENST00000560856 FCGRTP55899 365 aa18.09■□□□□ 0.49
SNRPA1-213ENST00000560856 KLRC3Q07444 240 aa18.09■□□□□ 0.49
SNRPA1-213ENST00000560856 COG2Q14746 738 aa18.09■□□□□ 0.49
SNRPA1-213ENST00000560856 GOPCQ9HD26 462 aa18.09■□□□□ 0.49
SNRPA1-213ENST00000560856 BTBD7Q9P203 1132 aa18.09■□□□□ 0.49
SNRPA1-213ENST00000560856 SYNPO2Q9UMS6 1093 aa18.09■□□□□ 0.49
SNRPA1-213ENST00000560856 RABGAP1Q9Y3P9 1069 aa18.09■□□□□ 0.49
SNRPA1-213ENST00000560856 PTCH2Q9Y6C5 1203 aa18.09■□□□□ 0.49
SNRPA1-213ENST00000560856 MGAMO43451 1857 aa18.08■□□□□ 0.49
SNRPA1-213ENST00000560856 NEDD4P46934 1319 aa18.08■□□□□ 0.49
SNRPA1-213ENST00000560856 TSPY2A6NKD2 308 aa18.08■□□□□ 0.48
SNRPA1-213ENST00000560856 DSG3P32926 999 aa18.08■□□□□ 0.48
SNRPA1-213ENST00000560856 PRMT2P55345 433 aa18.08■□□□□ 0.48
SNRPA1-213ENST00000560856 ERVK-9P63128 1117 aa18.08■□□□□ 0.48
SNRPA1-213ENST00000560856 ERVK-24P63145 666 aa18.08■□□□□ 0.48
SNRPA1-213ENST00000560856 MFSD6Q6ZSS7 791 aa18.08■□□□□ 0.48
SNRPA1-213ENST00000560856 GPRC5AQ8NFJ5 357 aa18.08■□□□□ 0.48
SNRPA1-213ENST00000560856 TANGO6Q9C0B7 1094 aa18.08■□□□□ 0.48
SNRPA1-213ENST00000560856 TCP11L1Q9NUJ3 509 aa18.08■□□□□ 0.48
SNRPA1-213ENST00000560856 FBXO28Q9NVF7 368 aa18.08■□□□□ 0.48
SNRPA1-213ENST00000560856 HOXC10Q9NYD6 342 aa18.08■□□□□ 0.48
SNRPA1-213ENST00000560856 CTNNA3Q9UI47 895 aa18.08■□□□□ 0.48
SNRPA1-213ENST00000560856 GABRQQ9UN88 632 aa18.08■□□□□ 0.48
SNRPA1-213ENST00000560856 ADAMTS5Q9UNA0 930 aa18.08■□□□□ 0.48
SNRPA1-213ENST00000560856 RRP12Q5JTH9 1297 aaKnown RBP18.07■□□□□ 0.48
SNRPA1-213ENST00000560856 FAM83BQ5T0W9 1011 aa18.07■□□□□ 0.48
SNRPA1-213ENST00000560856 LRRC47Q8N1G4 583 aaKnown RBP18.07■□□□□ 0.48
SNRPA1-213ENST00000560856 GMCL1P1Q8NEA9 526 aa18.07■□□□□ 0.48
SNRPA1-213ENST00000560856 MAP4K1Q92918 833 aa18.07■□□□□ 0.48
SNRPA1-213ENST00000560856 NUP88Q99567 741 aaPredicted RBP18.07■□□□□ 0.48
SNRPA1-213ENST00000560856 ESYT1Q9BSJ8 1104 aa18.07■□□□□ 0.48
SNRPA1-213ENST00000560856 PAGR1Q9BTK6 254 aa18.07■□□□□ 0.48
SNRPA1-213ENST00000560856 PORCNQ9H237 461 aa18.07■□□□□ 0.48
SNRPA1-213ENST00000560856 RNF41Q9H4P4 317 aaPredicted RBP18.07■□□□□ 0.48
SNRPA1-213ENST00000560856 GJD2Q9UKL4 321 aa18.07■□□□□ 0.48
SNRPA1-213ENST00000560856 MYH4Q9Y623 1939 aa18.07■□□□□ 0.48
SNRPA1-213ENST00000560856 LAMA4Q16363 1823 aa18.07■□□□□ 0.48
SNRPA1-213ENST00000560856 MYPNQ86TC9 1320 aa18.06■□□□□ 0.48
SNRPA1-213ENST00000560856 HOXD10P28358 340 aa18.06■□□□□ 0.48
SNRPA1-213ENST00000560856 PRKCZQ05513 592 aa18.06■□□□□ 0.48
SNRPA1-213ENST00000560856 IMMTQ16891 758 aaKnown RBP18.06■□□□□ 0.48
SNRPA1-213ENST00000560856 RCSD1Q6JBY9 416 aa18.06■□□□□ 0.48
SNRPA1-213ENST00000560856 ARMC5Q96C12 935 aa18.06■□□□□ 0.48
SNRPA1-213ENST00000560856 ATG4CQ96DT6 458 aa18.06■□□□□ 0.48
SNRPA1-213ENST00000560856 TOMM22Q9NS69 142 aa18.06■□□□□ 0.48
SNRPA1-213ENST00000560856 TNPO2O14787 897 aaKnown RBP18.05■□□□□ 0.48
SNRPA1-213ENST00000560856 FLOT1O75955 427 aa18.05■□□□□ 0.48
SNRPA1-213ENST00000560856 LSG1Q9H089 658 aaKnown RBP18.05■□□□□ 0.48
SNRPA1-213ENST00000560856 TAF6LQ9Y6J9 622 aa18.05■□□□□ 0.48
SNRPA1-213ENST00000560856 PARP14Q460N5 1801 aa18.05■□□□□ 0.48
SNRPA1-213ENST00000560856 CCDC85CA6NKD9 419 aa18.04■□□□□ 0.48
SNRPA1-213ENST00000560856 CAPN15O75808 1086 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms