RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 PSTPIP2Q9H939 334 aa11.01□□□□□ -0.65
TRPM1-212ENST00000560801 BCL2L12Q9HB09 334 aa11.01□□□□□ -0.65
TRPM1-212ENST00000560801 CYP2E1P05181 493 aaPredicted RBP11□□□□□ -0.65
TRPM1-212ENST00000560801 DESP17661 470 aa11□□□□□ -0.65
TRPM1-212ENST00000560801 SYDE2Q5VT97 1194 aa11□□□□□ -0.65
TRPM1-212ENST00000560801 SASS6Q6UVJ0 657 aa11□□□□□ -0.65
TRPM1-212ENST00000560801 CHMLP26374 656 aa11□□□□□ -0.65
TRPM1-212ENST00000560801 AMPD3Q01432 767 aa11□□□□□ -0.65
TRPM1-212ENST00000560801 KIF23Q02241 960 aaPredicted RBP11□□□□□ -0.65
TRPM1-212ENST00000560801 ASPRV1Q53RT3 343 aa11□□□□□ -0.65
TRPM1-212ENST00000560801 PRPF38AQ8NAV1 312 aaKnown RBP11□□□□□ -0.65
TRPM1-212ENST00000560801 AOX1Q06278 1338 aa11□□□□□ -0.65
TRPM1-212ENST00000560801 CSPG5O95196 566 aa11□□□□□ -0.65
TRPM1-212ENST00000560801 SLC16A2P36021 539 aa11□□□□□ -0.65
TRPM1-212ENST00000560801 APOBRQ0VD83 1088 aa11□□□□□ -0.65
TRPM1-212ENST00000560801 FAM212AQ96EL1 285 aa11□□□□□ -0.65
TRPM1-212ENST00000560801 ZNF215Q9UL58 517 aaPredicted RBP11□□□□□ -0.65
TRPM1-212ENST00000560801 NOP58Q9Y2X3 529 aaKnown RBP11□□□□□ -0.65
TRPM1-212ENST00000560801 CHD2O14647 1828 aaKnown RBP11□□□□□ -0.65
TRPM1-212ENST00000560801 TNKSO95271 1327 aa11□□□□□ -0.65
TRPM1-212ENST00000560801 FDX1P10109 184 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 RGS2P41220 211 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 PPP2R5BQ15173 497 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 FBXO33Q7Z6M2 555 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 MICAL1Q8TDZ2 1067 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 SEC62Q99442 399 aaKnown RBP10.99□□□□□ -0.65
TRPM1-212ENST00000560801 DDX49Q9Y6V7 483 aaKnown RBP10.99□□□□□ -0.65
TRPM1-212ENST00000560801 FMN2Q9NZ56 1722 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 CYP2D7A0A087X1C5 515 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 KIF28PB7ZC32 967 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 SP3Q02447 781 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 POLA2Q14181 598 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 C3orf67Q6ZVT6 689 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 ZNF784Q8NCA9 323 aaPredicted RBP10.99□□□□□ -0.65
TRPM1-212ENST00000560801 DSCC1Q9BVC3 393 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 RAVER2Q9HCJ3 691 aaKnown RBP10.99□□□□□ -0.65
TRPM1-212ENST00000560801 UTYO14607 1347 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 WDR33Q9C0J8 1336 aaKnown RBP10.99□□□□□ -0.65
TRPM1-212ENST00000560801 ARID4AP29374 1257 aaPredicted RBP10.99□□□□□ -0.65
TRPM1-212ENST00000560801 LRRC27Q9C0I9 530 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 RNF146Q9NTX7 359 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 FEM1BQ9UK73 627 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 ZC3H4Q9UPT8 1303 aaKnown RBP10.99□□□□□ -0.65
TRPM1-212ENST00000560801 FGAP02671 866 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 RARBP10826 455 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 MCTP2Q6DN12 878 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 RNF207Q6ZRF8 634 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 SMC5Q8IY18 1101 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 CDHR1Q96JP9 859 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 IFT74Q96LB3 600 aa10.99□□□□□ -0.65
TRPM1-212ENST00000560801 PALM3A6NDB9 673 aaPredicted RBP10.98□□□□□ -0.65
TRPM1-212ENST00000560801 BMP15O95972 392 aa10.98□□□□□ -0.65
TRPM1-212ENST00000560801 C6orf222P0C671 652 aaPredicted RBP10.98□□□□□ -0.65
TRPM1-212ENST00000560801 PSMC4P43686 418 aa10.98□□□□□ -0.65
TRPM1-212ENST00000560801 FAM160B1Q5W0V3 765 aa10.98□□□□□ -0.65
TRPM1-212ENST00000560801 MYL10Q9BUA6 226 aa10.98□□□□□ -0.65
TRPM1-212ENST00000560801 ASB14A6NK59 587 aa10.98□□□□□ -0.65
TRPM1-212ENST00000560801 KRT2P35908 639 aa10.98□□□□□ -0.65
TRPM1-212ENST00000560801 REXO1Q8N1G1 1221 aaKnown RBP10.98□□□□□ -0.65
TRPM1-212ENST00000560801 TBC1D2Q9BYX2 928 aa10.98□□□□□ -0.65
TRPM1-212ENST00000560801 GZF1Q9H116 711 aaPredicted RBP10.98□□□□□ -0.65
TRPM1-212ENST00000560801 SUGCTQ9HAC7 445 aa10.98□□□□□ -0.65
TRPM1-212ENST00000560801 PODXL2Q9NZ53 605 aa10.98□□□□□ -0.65
TRPM1-212ENST00000560801 ARHGEF28Q8N1W1 1705 aaKnown RBP10.98□□□□□ -0.65
TRPM1-212ENST00000560801 IGSF3O75054 1194 aa10.98□□□□□ -0.65
TRPM1-212ENST00000560801 TRPM4Q8TD43 1214 aa10.98□□□□□ -0.65
TRPM1-212ENST00000560801 HTATIP2Q9BUP3 242 aa10.98□□□□□ -0.65
TRPM1-212ENST00000560801 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.98□□□□□ -0.65
TRPM1-212ENST00000560801 GAS7O60861 476 aa10.98□□□□□ -0.65
TRPM1-212ENST00000560801 EEF2P13639 858 aaKnown RBP10.98□□□□□ -0.65
TRPM1-212ENST00000560801 ARRDC4Q8NCT1 418 aa10.98□□□□□ -0.65
TRPM1-212ENST00000560801 LPAR1Q92633 364 aa10.98□□□□□ -0.65
TRPM1-212ENST00000560801 PHACTR2O75167 634 aa10.97□□□□□ -0.65
TRPM1-212ENST00000560801 VIL1P09327 827 aaKnown RBP10.97□□□□□ -0.65
TRPM1-212ENST00000560801 HSPD1P10809 573 aaKnown RBP10.97□□□□□ -0.65
TRPM1-212ENST00000560801 PPM1FP49593 454 aaPredicted RBP10.97□□□□□ -0.65
TRPM1-212ENST00000560801 ZBTB33Q86T24 672 aa10.97□□□□□ -0.65
TRPM1-212ENST00000560801 ZNF654Q8IZM8 581 aa10.97□□□□□ -0.65
TRPM1-212ENST00000560801 MB21D1Q8N884 522 aa10.97□□□□□ -0.65
TRPM1-212ENST00000560801 ACAD9Q9H845 621 aa10.97□□□□□ -0.65
TRPM1-212ENST00000560801 ZNF541Q9H0D2 1346 aa10.97□□□□□ -0.65
TRPM1-212ENST00000560801 GNAT1P11488 350 aa10.97□□□□□ -0.65
TRPM1-212ENST00000560801 HARSP12081 509 aaKnown RBP10.97□□□□□ -0.65
TRPM1-212ENST00000560801 KLRK1P26718 216 aa10.97□□□□□ -0.65
TRPM1-212ENST00000560801 KCNJ6P48051 423 aa10.97□□□□□ -0.65
TRPM1-212ENST00000560801 BRPF1P55201 1214 aaPredicted RBP10.97□□□□□ -0.65
TRPM1-212ENST00000560801 RNF180Q86T96 592 aa10.97□□□□□ -0.65
TRPM1-212ENST00000560801 CCDC84Q86UT8 332 aaPredicted RBP10.97□□□□□ -0.65
TRPM1-212ENST00000560801 SPATA32Q96LK8 384 aa10.97□□□□□ -0.65
TRPM1-212ENST00000560801 NRBP2Q9NSY0 501 aa10.97□□□□□ -0.65
TRPM1-212ENST00000560801 PDHXO00330 501 aa10.97□□□□□ -0.65
TRPM1-212ENST00000560801 YBX3P16989 372 aaKnown RBP eCLIP10.97□□□□□ -0.65
TRPM1-212ENST00000560801 INPP5BP32019 993 aa10.97□□□□□ -0.65
TRPM1-212ENST00000560801 RABL6Q3YEC7 729 aaPredicted RBP10.97□□□□□ -0.65
TRPM1-212ENST00000560801 GLT1D1Q96MS3 346 aa10.97□□□□□ -0.65
TRPM1-212ENST00000560801 SMCO2A6NFE2 343 aa10.96□□□□□ -0.65
TRPM1-212ENST00000560801 CXCL11O14625 94 aa10.96□□□□□ -0.65
TRPM1-212ENST00000560801 FAM13AO94988 1023 aa10.96□□□□□ -0.65
TRPM1-212ENST00000560801 FOSP01100 380 aaPredicted RBP10.96□□□□□ -0.65
TRPM1-212ENST00000560801 DNTTIP2Q5QJE6 756 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms