RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 OXER1Q8TDS5 423 aa28.82■■■□□ 2.2
SHF-208ENST00000560734 CBX8Q9HC52 389 aa28.82■■■□□ 2.2
SHF-208ENST00000560734 USP25Q9UHP3 1055 aa28.82■■■□□ 2.2
SHF-208ENST00000560734 ZNF165P49910 485 aa28.81■■■□□ 2.2
SHF-208ENST00000560734 NPY5RQ15761 445 aa28.81■■■□□ 2.2
SHF-208ENST00000560734 GALNT17Q6IS24 598 aa28.81■■■□□ 2.2
SHF-208ENST00000560734 APOBEC3HQ6NTF7 200 aaKnown RBP28.81■■■□□ 2.2
SHF-208ENST00000560734 MSNP26038 577 aaKnown RBP28.8■■■□□ 2.2
SHF-208ENST00000560734 SYKP43405 635 aa28.8■■■□□ 2.2
SHF-208ENST00000560734 BAG6P46379 1132 aa28.8■■■□□ 2.2
SHF-208ENST00000560734 DACT2Q5SW24 774 aa28.8■■■□□ 2.2
SHF-208ENST00000560734 EHD4Q9H223 541 aa28.8■■■□□ 2.2
SHF-208ENST00000560734 CABP5Q9NP86 173 aa28.8■■■□□ 2.2
SHF-208ENST00000560734 KIAA1468Q9P260 1216 aa28.8■■■□□ 2.2
SHF-208ENST00000560734 SRPRBQ9Y5M8 271 aaKnown RBP28.8■■■□□ 2.2
SHF-208ENST00000560734 TRIM75PA6NK02 468 aa28.8■■■□□ 2.2
SHF-208ENST00000560734 ADCY5O95622 1261 aa28.8■■■□□ 2.2
SHF-208ENST00000560734 KIAA2012Q0VF49 1180 aa28.8■■■□□ 2.2
SHF-208ENST00000560734 PPP4R3BQ5MIZ7 849 aa28.8■■■□□ 2.2
SHF-208ENST00000560734 CDC42EP5Q6NZY7 148 aa28.8■■■□□ 2.2
SHF-208ENST00000560734 SLC16A10Q8TF71 515 aa28.8■■■□□ 2.2
SHF-208ENST00000560734 SPZ1Q9BXG8 430 aa28.8■■■□□ 2.2
SHF-208ENST00000560734 FBXO2Q9UK22 296 aaPredicted RBP28.8■■■□□ 2.2
SHF-208ENST00000560734 STX8Q9UNK0 236 aa28.8■■■□□ 2.2
SHF-208ENST00000560734 CRKP46108 304 aa28.79■■■□□ 2.2
SHF-208ENST00000560734 NAT10Q9H0A0 1025 aaKnown RBP28.79■■■□□ 2.2
SHF-208ENST00000560734 OSBPL5Q9H0X9 879 aaPredicted RBP28.79■■■□□ 2.2
SHF-208ENST00000560734 ZNF646O15015 1829 aaPredicted RBP28.78■■■□□ 2.2
SHF-208ENST00000560734 F8W031 263 aaPredicted RBP28.78■■■□□ 2.2
SHF-208ENST00000560734 ECE2O60344 883 aa28.78■■■□□ 2.2
SHF-208ENST00000560734 DBNDD1Q9H9R9 158 aa28.78■■■□□ 2.2
SHF-208ENST00000560734 SERPINB13Q9UIV8 391 aa28.78■■■□□ 2.2
SHF-208ENST00000560734 CHRNA5P30532 468 aa28.77■■■□□ 2.2
SHF-208ENST00000560734 SERPINA10Q9UK55 444 aa28.77■■■□□ 2.2
SHF-208ENST00000560734 PCDHB6Q9Y5E3 794 aa28.77■■■□□ 2.2
SHF-208ENST00000560734 IGKV6D-41A0A0C4DH26 115 aa28.77■■■□□ 2.2
SHF-208ENST00000560734 DAGLBQ8NCG7 672 aa28.77■■■□□ 2.2
SHF-208ENST00000560734 CCDC148Q8NFR7 591 aa28.77■■■□□ 2.2
SHF-208ENST00000560734 DNAJC25Q9H1X3 360 aa28.77■■■□□ 2.2
SHF-208ENST00000560734 DHX36Q9H2U1 1008 aaKnown RBP28.77■■■□□ 2.2
SHF-208ENST00000560734 FAM13BQ9NYF5 915 aa28.77■■■□□ 2.2
SHF-208ENST00000560734 ZNF500O60304 480 aaPredicted RBP28.76■■■□□ 2.19
SHF-208ENST00000560734 HLA-DOAP06340 250 aa28.76■■■□□ 2.19
SHF-208ENST00000560734 NLRP5P59047 1200 aa28.76■■■□□ 2.19
SHF-208ENST00000560734 FERMT2Q96AC1 680 aa28.76■■■□□ 2.19
SHF-208ENST00000560734 BPIFA3Q9BQP9 254 aa28.76■■■□□ 2.19
SHF-208ENST00000560734 IDI2Q9BXS1 227 aa28.76■■■□□ 2.19
SHF-208ENST00000560734 DDX4Q9NQI0 724 aaKnown RBP28.76■■■□□ 2.19
SHF-208ENST00000560734 IQCB1Q15051 598 aa28.75■■■□□ 2.19
SHF-208ENST00000560734 STAG2Q8N3U4 1231 aa28.75■■■□□ 2.19
SHF-208ENST00000560734 CEP95Q96GE4 821 aa28.75■■■□□ 2.19
SHF-208ENST00000560734 MXD3Q9BW11 206 aa28.75■■■□□ 2.19
SHF-208ENST00000560734 KCNH3Q9ULD8 1083 aa28.75■■■□□ 2.19
SHF-208ENST00000560734 hCG_1642624A0A1W2PR95 340 aa28.74■■■□□ 2.19
SHF-208ENST00000560734 PARP1P09874 1014 aaKnown RBP28.74■■■□□ 2.19
SHF-208ENST00000560734 PICALMQ13492 652 aa28.74■■■□□ 2.19
SHF-208ENST00000560734 LUZP1Q86V48 1076 aa28.74■■■□□ 2.19
SHF-208ENST00000560734 CEP57L1Q8IYX8 460 aa28.74■■■□□ 2.19
SHF-208ENST00000560734 MTMR4Q9NYA4 1195 aa28.74■■■□□ 2.19
SHF-208ENST00000560734 HOOK1Q9UJC3 728 aaKnown RBP28.74■■■□□ 2.19
SHF-208ENST00000560734 ZKSCAN5Q9Y2L8 839 aa28.74■■■□□ 2.19
SHF-208ENST00000560734 SCNN1DP51172 638 aa28.74■■■□□ 2.19
SHF-208ENST00000560734 ZRSR1Q15695 479 aaKnown RBP28.74■■■□□ 2.19
SHF-208ENST00000560734 CCDC17Q96LX7 622 aa28.74■■■□□ 2.19
SHF-208ENST00000560734 VPS33BQ9H267 617 aa28.74■■■□□ 2.19
SHF-208ENST00000560734 TUBE1Q9UJT0 475 aa28.74■■■□□ 2.19
SHF-208ENST00000560734 PCDHA4Q9UN74 947 aa28.74■■■□□ 2.19
SHF-208ENST00000560734 SRCAPQ6ZRS2 3230 aa28.73■■■□□ 2.19
SHF-208ENST00000560734 CLIC6Q96NY7 704 aa28.73■■■□□ 2.19
SHF-208ENST00000560734 KLRF2D3W0D1 207 aa28.72■■■□□ 2.19
SHF-208ENST00000560734 TPM3P06753 285 aa28.72■■■□□ 2.19
SHF-208ENST00000560734 RTKN2Q8IZC4 609 aa28.72■■■□□ 2.19
SHF-208ENST00000560734 BLIDQ8IZY5 108 aa28.72■■■□□ 2.19
SHF-208ENST00000560734 BARHL2Q9NY43 387 aa28.72■■■□□ 2.19
SHF-208ENST00000560734 CCDC12Q8WUD4 166 aaPredicted RBP28.72■■■□□ 2.19
SHF-208ENST00000560734 hCG_1984214I3L0E3 225 aa28.71■■■□□ 2.19
SHF-208ENST00000560734 CYTH3O43739 400 aa28.71■■■□□ 2.19
SHF-208ENST00000560734 NLRP12P59046 1061 aa28.71■■■□□ 2.19
SHF-208ENST00000560734 TTC38Q5R3I4 469 aa28.71■■■□□ 2.19
SHF-208ENST00000560734 KANK3Q6NY19 840 aa28.71■■■□□ 2.19
SHF-208ENST00000560734 SARM1Q6SZW1 724 aa28.71■■■□□ 2.19
SHF-208ENST00000560734 KRBA2Q6ZNG9 492 aa28.71■■■□□ 2.19
SHF-208ENST00000560734 ZNF713Q8N859 430 aaPredicted RBP28.71■■■□□ 2.19
SHF-208ENST00000560734 PSMD1Q99460 953 aa28.71■■■□□ 2.19
SHF-208ENST00000560734 SCN9AQ15858 1988 aa28.7■■■□□ 2.19
SHF-208ENST00000560734 ASPRV1Q53RT3 343 aa28.7■■■□□ 2.19
SHF-208ENST00000560734 EARS2Q5JPH6 523 aaKnown RBP28.7■■■□□ 2.19
SHF-208ENST00000560734 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.7■■■□□ 2.19
SHF-208ENST00000560734 TTLL6Q8N841 843 aa28.7■■■□□ 2.19
SHF-208ENST00000560734 COL2A1P02458 1487 aaPredicted RBP28.69■■■□□ 2.18
SHF-208ENST00000560734 GOLGA6L19H0YKK7 550 aa28.69■■■□□ 2.18
SHF-208ENST00000560734 M0R2N6 131 aa28.69■■■□□ 2.18
SHF-208ENST00000560734 PTMAP06454 111 aaKnown RBP28.69■■■□□ 2.18
SHF-208ENST00000560734 SNHG28P0DPA3 235 aa28.69■■■□□ 2.18
SHF-208ENST00000560734 SHMT1P34896 483 aa28.69■■■□□ 2.18
SHF-208ENST00000560734 SLC35G1Q2M3R5 365 aa28.69■■■□□ 2.18
SHF-208ENST00000560734 C11orf57Q6ZUT1 292 aaPredicted RBP28.69■■■□□ 2.18
SHF-208ENST00000560734 KCNQ5Q9NR82 932 aa28.69■■■□□ 2.18
SHF-208ENST00000560734 GREB1LQ9C091 1923 aaPredicted RBP28.69■■■□□ 2.18
SHF-208ENST00000560734 AP5Z1O43299 807 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms