RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 TOMM22Q9NS69 142 aa15.43■□□□□ 0.06
CTDSPL2-209ENST00000560620 GABRQQ9UN88 632 aa15.43■□□□□ 0.06
CTDSPL2-209ENST00000560620 TMX2Q9Y320 296 aa15.43■□□□□ 0.06
CTDSPL2-209ENST00000560620 CCDC171Q6TFL3 1326 aa15.43■□□□□ 0.06
CTDSPL2-209ENST00000560620 WDR78Q5VTH9 848 aa15.42■□□□□ 0.06
CTDSPL2-209ENST00000560620 LPAR1Q92633 364 aa15.42■□□□□ 0.06
CTDSPL2-209ENST00000560620 TMEM106CQ9BVX2 250 aa15.42■□□□□ 0.06
CTDSPL2-209ENST00000560620 VCPKMTQ9H867 229 aa15.42■□□□□ 0.06
CTDSPL2-209ENST00000560620 CENPFP49454 3210 aa15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 HSPD1P10809 573 aaKnown RBP15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 GRK4P32298 578 aa15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 FLT3LGP49771 235 aa15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 ERVK-9P63128 1117 aa15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 ERVK-24P63145 666 aa15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 MLLT1Q03111 559 aaPredicted RBP15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 COG2Q14746 738 aa15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 FAM47AQ5JRC9 791 aa15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 TTC22Q5TAA0 569 aa15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 ZNF589Q86UQ0 364 aaPredicted RBP15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 SIAH1Q8IUQ4 282 aa15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 TXNRD2Q9NNW7 524 aa15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 RBPJLQ9UBG7 517 aa15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 MORF4L1Q9UBU8 362 aa15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 CLIP2Q9UDT6 1046 aa15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 HTTP42858 3142 aa15.41■□□□□ 0.06
CTDSPL2-209ENST00000560620 TSPY2A6NKD2 308 aa15.4■□□□□ 0.06
CTDSPL2-209ENST00000560620 FOXP2O15409 715 aa15.4■□□□□ 0.06
CTDSPL2-209ENST00000560620 FLOT1O75955 427 aa15.4■□□□□ 0.06
CTDSPL2-209ENST00000560620 CCNA1P78396 465 aa15.4■□□□□ 0.06
CTDSPL2-209ENST00000560620 TFAP4Q01664 338 aa15.4■□□□□ 0.06
CTDSPL2-209ENST00000560620 KIAA1755Q5JYT7 1200 aa15.4■□□□□ 0.06
CTDSPL2-209ENST00000560620 ARMC5Q96C12 935 aa15.4■□□□□ 0.06
CTDSPL2-209ENST00000560620 ZNF333Q96JL9 665 aa15.4■□□□□ 0.06
CTDSPL2-209ENST00000560620 HOXC10Q9NYD6 342 aa15.4■□□□□ 0.06
CTDSPL2-209ENST00000560620 ISY1Q9ULR0 285 aaKnown RBP15.4■□□□□ 0.06
CTDSPL2-209ENST00000560620 RABGAP1Q9Y3P9 1069 aa15.4■□□□□ 0.06
CTDSPL2-209ENST00000560620 SPDYE16A6NNV3 312 aaPredicted RBP15.39■□□□□ 0.05
CTDSPL2-209ENST00000560620 WDR46O15213 610 aaKnown RBP15.39■□□□□ 0.05
CTDSPL2-209ENST00000560620 ADCY3O60266 1144 aa15.39■□□□□ 0.05
CTDSPL2-209ENST00000560620 RANBP6O60518 1105 aaKnown RBP15.39■□□□□ 0.05
CTDSPL2-209ENST00000560620 FGAP02671 866 aa15.39■□□□□ 0.05
CTDSPL2-209ENST00000560620 MAPK4P31152 587 aa15.39■□□□□ 0.05
CTDSPL2-209ENST00000560620 PLS1Q14651 629 aa15.39■□□□□ 0.05
CTDSPL2-209ENST00000560620 Q3C1V9 767 aa15.39■□□□□ 0.05
CTDSPL2-209ENST00000560620 RRP12Q5JTH9 1297 aaKnown RBP15.39■□□□□ 0.05
CTDSPL2-209ENST00000560620 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.39■□□□□ 0.05
CTDSPL2-209ENST00000560620 NYAP2Q9P242 653 aa15.39■□□□□ 0.05
CTDSPL2-209ENST00000560620 TTLL1O95922 423 aa15.38■□□□□ 0.05
CTDSPL2-209ENST00000560620 NEFLP07196 543 aa15.38■□□□□ 0.05
CTDSPL2-209ENST00000560620 GSPT1P15170 499 aaKnown RBP15.38■□□□□ 0.05
CTDSPL2-209ENST00000560620 ELNP15502 786 aa15.38■□□□□ 0.05
CTDSPL2-209ENST00000560620 HAND2P61296 217 aa15.38■□□□□ 0.05
CTDSPL2-209ENST00000560620 UBXN2AP68543 259 aa15.38■□□□□ 0.05
CTDSPL2-209ENST00000560620 ALX1Q15699 326 aa15.38■□□□□ 0.05
CTDSPL2-209ENST00000560620 SLAIN1Q8ND83 568 aa15.38■□□□□ 0.05
CTDSPL2-209ENST00000560620 NEDD1Q8NHV4 660 aa15.38■□□□□ 0.05
CTDSPL2-209ENST00000560620 CEP95Q96GE4 821 aa15.38■□□□□ 0.05
CTDSPL2-209ENST00000560620 INCENPQ9NQS7 918 aa15.38■□□□□ 0.05
CTDSPL2-209ENST00000560620 RGS19P49795 217 aa15.37■□□□□ 0.05
CTDSPL2-209ENST00000560620 FAM83BQ5T0W9 1011 aa15.37■□□□□ 0.05
CTDSPL2-209ENST00000560620 CENPQQ7L2Z9 268 aaPredicted RBP15.37■□□□□ 0.05
CTDSPL2-209ENST00000560620 LRRC47Q8N1G4 583 aaKnown RBP15.37■□□□□ 0.05
CTDSPL2-209ENST00000560620 NUDT12Q9BQG2 462 aa15.37■□□□□ 0.05
CTDSPL2-209ENST00000560620 PORCNQ9H237 461 aa15.37■□□□□ 0.05
CTDSPL2-209ENST00000560620 MTMR4Q9NYA4 1195 aa15.37■□□□□ 0.05
CTDSPL2-209ENST00000560620 BTBD7Q9P203 1132 aa15.37■□□□□ 0.05
CTDSPL2-209ENST00000560620 ANAPC4Q9UJX5 808 aa15.37■□□□□ 0.05
CTDSPL2-209ENST00000560620 STX8Q9UNK0 236 aa15.37■□□□□ 0.05
CTDSPL2-209ENST00000560620 IVNS1ABPQ9Y6Y0 642 aa15.37■□□□□ 0.05
CTDSPL2-209ENST00000560620 MYH4Q9Y623 1939 aa15.37■□□□□ 0.05
CTDSPL2-209ENST00000560620 POTEFA5A3E0 1075 aa15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 F5H6K3 240 aa15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 ZNF213O14771 459 aa15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 CNMDO75829 334 aa15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 CYP2B6P20813 491 aa15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 DSG3P32926 999 aa15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 KLRC3Q07444 240 aa15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 IRF5Q13568 498 aa15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 LBX2Q6XYB7 198 aa15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 GPR142Q7Z601 462 aa15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 PLEKHH3Q7Z736 793 aa15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 RUFY2Q8WXA3 655 aa15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 CHMP4CQ96CF2 233 aa15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 ATG4CQ96DT6 458 aa15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 NUP88Q99567 741 aaPredicted RBP15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 GREB1LQ9C091 1923 aaPredicted RBP15.36■□□□□ 0.05
CTDSPL2-209ENST00000560620 DOCK3Q8IZD9 2030 aa15.35■□□□□ 0.05
CTDSPL2-209ENST00000560620 IGKV6D-41A0A0C4DH26 115 aa15.35■□□□□ 0.05
CTDSPL2-209ENST00000560620 MTFR1Q15390 333 aa15.35■□□□□ 0.05
CTDSPL2-209ENST00000560620 PPP4R3BQ5MIZ7 849 aa15.35■□□□□ 0.05
CTDSPL2-209ENST00000560620 POTEEQ6S8J3 1075 aa15.35■□□□□ 0.05
CTDSPL2-209ENST00000560620 MFSD6Q6ZSS7 791 aa15.35■□□□□ 0.05
CTDSPL2-209ENST00000560620 MB21D1Q8N884 522 aa15.35■□□□□ 0.05
CTDSPL2-209ENST00000560620 PXYLP1Q8TE99 480 aa15.35■□□□□ 0.05
CTDSPL2-209ENST00000560620 SOCS4Q8WXH5 440 aa15.35■□□□□ 0.05
CTDSPL2-209ENST00000560620 CCDC136Q96JN2 1154 aa15.35■□□□□ 0.05
CTDSPL2-209ENST00000560620 RNF208Q9H0X6 261 aa15.35■□□□□ 0.05
CTDSPL2-209ENST00000560620 FBXO28Q9NVF7 368 aa15.35■□□□□ 0.05
CTDSPL2-209ENST00000560620 MTMR7Q9Y216 660 aa15.35■□□□□ 0.05
CTDSPL2-209ENST00000560620 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms