RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 TNFRSF10AO00220 468 aa9.57□□□□□ -0.88
LRRC28-219ENST00000560483 IRF6O14896 467 aa9.57□□□□□ -0.88
LRRC28-219ENST00000560483 ST8SIA5O15466 376 aa9.57□□□□□ -0.88
LRRC28-219ENST00000560483 GPAA1O43292 621 aa9.57□□□□□ -0.88
LRRC28-219ENST00000560483 S1PR4O95977 384 aa9.57□□□□□ -0.88
LRRC28-219ENST00000560483 HSPA8P11142 646 aaKnown RBP9.57□□□□□ -0.88
LRRC28-219ENST00000560483 GJA5P36382 358 aa9.57□□□□□ -0.88
LRRC28-219ENST00000560483 PPIL2Q13356 520 aa9.57□□□□□ -0.88
LRRC28-219ENST00000560483 RAB3GAP1Q15042 981 aa9.57□□□□□ -0.88
LRRC28-219ENST00000560483 TAF1CQ15572 869 aaPredicted RBP9.57□□□□□ -0.88
LRRC28-219ENST00000560483 CCDC84Q86UT8 332 aaPredicted RBP9.57□□□□□ -0.88
LRRC28-219ENST00000560483 BBXQ8WY36 941 aaPredicted RBP9.57□□□□□ -0.88
LRRC28-219ENST00000560483 FEZ1Q99689 392 aa9.57□□□□□ -0.88
LRRC28-219ENST00000560483 NACAP1Q9BZK3 213 aa9.57□□□□□ -0.88
LRRC28-219ENST00000560483 DIAPH3Q9NSV4 1193 aa9.57□□□□□ -0.88
LRRC28-219ENST00000560483 ATP8A2Q9NTI2 1148 aa9.57□□□□□ -0.88
LRRC28-219ENST00000560483 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.57□□□□□ -0.88
LRRC28-219ENST00000560483 ATRNL1Q5VV63 1379 aa9.57□□□□□ -0.88
LRRC28-219ENST00000560483 DOCK1Q14185 1865 aa9.57□□□□□ -0.88
LRRC28-219ENST00000560483 ATAD5Q96QE3 1844 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 MYH8P13535 1937 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 RAD21O60216 631 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 CYP2D6P10635 497 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 PTPRAP18433 802 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 GNAT2P19087 354 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 TM4SF4P48230 202 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 ATP2B2Q01814 1243 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 CERKLQ49MI3 558 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-219ENST00000560483 NOL9Q5SY16 702 aaKnown RBP9.56□□□□□ -0.88
LRRC28-219ENST00000560483 PLEKHM2Q8IWE5 1019 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 TNS4Q8IZW8 715 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 OSBP2Q969R2 916 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 SEC62Q99442 399 aaKnown RBP9.56□□□□□ -0.88
LRRC28-219ENST00000560483 NAPBQ9H115 298 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 DCP1AQ9NPI6 582 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-219ENST00000560483 SAGE1Q9NXZ1 904 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 STAP2Q9UGK3 403 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 ZNF112Q9UJU3 913 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 THSD7BQ9C0I4 1608 aa9.56□□□□□ -0.88
LRRC28-219ENST00000560483 COL2A1P02458 1487 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-219ENST00000560483 CYP2D7A0A087X1C5 515 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 USP17L5A8MUK1 530 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 PHF20L1A8MW92 1017 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 USP17L12C9JPN9 530 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 USP17L21D6R901 530 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 IGF2BP3O00425 579 aaKnown RBP eCLIP9.55□□□□□ -0.88
LRRC28-219ENST00000560483 GH2P01242 217 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 ASNSP08243 561 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 GGCXP38435 758 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 CAP2P40123 477 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 MLLT3P42568 568 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-219ENST00000560483 PLCD1P51178 756 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 SPP2Q13103 211 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 ZYXQ15942 572 aaKnown RBP9.55□□□□□ -0.88
LRRC28-219ENST00000560483 ABCB5Q2M3G0 1257 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 CCDC129Q6ZRS4 1044 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 BRI3BPQ8WY22 251 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 DYNLL2Q96FJ2 89 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 TMUB1Q9BVT8 246 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 MKNK2Q9HBH9 465 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 ZFYVE28Q9HCC9 887 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 TMOD4Q9NZQ9 345 aa9.55□□□□□ -0.88
LRRC28-219ENST00000560483 ARPP21Q9UBL0 812 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-219ENST00000560483 HIP1O00291 1037 aa9.54□□□□□ -0.88
LRRC28-219ENST00000560483 SLC3A2P08195 630 aaKnown RBP9.54□□□□□ -0.88
LRRC28-219ENST00000560483 COL13A1Q5TAT6 717 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-219ENST00000560483 CWC27Q6UX04 472 aaKnown RBP9.54□□□□□ -0.88
LRRC28-219ENST00000560483 CENPQQ7L2Z9 268 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-219ENST00000560483 FASTKD5Q7L8L6 764 aaKnown RBP9.54□□□□□ -0.88
LRRC28-219ENST00000560483 ZNF280CQ8ND82 737 aa9.54□□□□□ -0.88
LRRC28-219ENST00000560483 SMCR8Q8TEV9 937 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-219ENST00000560483 STRBPQ96SI9 672 aaKnown RBP9.54□□□□□ -0.88
LRRC28-219ENST00000560483 PRDM10Q9NQV6 1147 aa9.54□□□□□ -0.88
LRRC28-219ENST00000560483 TOMM22Q9NS69 142 aa9.54□□□□□ -0.88
LRRC28-219ENST00000560483 SWAP70Q9UH65 585 aa9.54□□□□□ -0.88
LRRC28-219ENST00000560483 ZBTB21Q9ULJ3 1066 aa9.54□□□□□ -0.88
LRRC28-219ENST00000560483 SALL3Q9BXA9 1300 aa9.54□□□□□ -0.88
LRRC28-219ENST00000560483 PATL2C9JE40 543 aaKnown RBP9.53□□□□□ -0.88
LRRC28-219ENST00000560483 BTBD19C9JJ37 291 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 PDHXO00330 501 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 CXCL11O14625 94 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 HMGCS2P54868 508 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 MFAP1P55081 439 aaKnown RBP9.53□□□□□ -0.88
LRRC28-219ENST00000560483 NMIQ13287 307 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-219ENST00000560483 CRHR2Q13324 411 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 MTMR2Q13614 643 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 KIF22Q14807 665 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 MCMDC2Q4G0Z9 681 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 ZMYM1Q5SVZ6 1142 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 FAM43AQ8N2R8 423 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 SLC44A5Q8NCS7 719 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 FAM227BQ96M60 508 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 PARK7Q99497 189 aaKnown RBP9.53□□□□□ -0.88
LRRC28-219ENST00000560483 EHD4Q9H223 541 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 DNAJC18Q9H819 358 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 ZNF287Q9HBT7 754 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 HELLSQ9NRZ9 838 aa9.53□□□□□ -0.88
LRRC28-219ENST00000560483 ISY1Q9ULR0 285 aaKnown RBP9.53□□□□□ -0.88
LRRC28-219ENST00000560483 SIPA1L1O43166 1804 aa9.52□□□□□ -0.89
LRRC28-219ENST00000560483 A0A0D9SFI3 127 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms