RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 PLEKHH3Q7Z736 793 aa27.82■■■□□ 2.04
CRNDE-209ENST00000560208 UBE2Q1Q7Z7E8 422 aa27.82■■■□□ 2.04
CRNDE-209ENST00000560208 ARHGEF10LQ9HCE6 1279 aa27.82■■■□□ 2.04
CRNDE-209ENST00000560208 SPDYE16A6NNV3 312 aaPredicted RBP27.81■■■□□ 2.04
CRNDE-209ENST00000560208 TFRCP02786 760 aaKnown RBP27.81■■■□□ 2.04
CRNDE-209ENST00000560208 XRCC5P13010 732 aaKnown RBP27.81■■■□□ 2.04
CRNDE-209ENST00000560208 TRIM32Q13049 653 aa27.81■■■□□ 2.04
CRNDE-209ENST00000560208 LRRFIP1Q32MZ4 808 aaKnown RBP27.81■■■□□ 2.04
CRNDE-209ENST00000560208 GIMAP6Q6P9H5 292 aa27.81■■■□□ 2.04
CRNDE-209ENST00000560208 TRIB2Q92519 343 aa27.81■■■□□ 2.04
CRNDE-209ENST00000560208 CWC22Q9HCG8 908 aaKnown RBP27.81■■■□□ 2.04
CRNDE-209ENST00000560208 TMX2Q9Y320 296 aa27.81■■■□□ 2.04
CRNDE-209ENST00000560208 SALL3Q9BXA9 1300 aa27.81■■■□□ 2.04
CRNDE-209ENST00000560208 GPAA1O43292 621 aa27.8■■■□□ 2.04
CRNDE-209ENST00000560208 CAPN2P17655 700 aa27.8■■■□□ 2.04
CRNDE-209ENST00000560208 SBK1Q52WX2 424 aa27.8■■■□□ 2.04
CRNDE-209ENST00000560208 KIAA1755Q5JYT7 1200 aa27.8■■■□□ 2.04
CRNDE-209ENST00000560208 MORN1Q5T089 497 aa27.8■■■□□ 2.04
CRNDE-209ENST00000560208 USP6NLQ92738 828 aa27.8■■■□□ 2.04
CRNDE-209ENST00000560208 TANGO6Q9C0B7 1094 aa27.8■■■□□ 2.04
CRNDE-209ENST00000560208 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.8■■■□□ 2.04
CRNDE-209ENST00000560208 SH2D4AQ9H788 454 aa27.8■■■□□ 2.04
CRNDE-209ENST00000560208 BTBD7Q9P203 1132 aa27.8■■■□□ 2.04
CRNDE-209ENST00000560208 RLFQ13129 1914 aa27.79■■■□□ 2.04
CRNDE-209ENST00000560208 FARP2O94887 1054 aaPredicted RBP27.79■■■□□ 2.04
CRNDE-209ENST00000560208 PDE1AP54750 535 aa27.79■■■□□ 2.04
CRNDE-209ENST00000560208 COG2Q14746 738 aa27.79■■■□□ 2.04
CRNDE-209ENST00000560208 LPAR1Q92633 364 aa27.79■■■□□ 2.04
CRNDE-209ENST00000560208 HMX1Q9NP08 348 aaPredicted RBP27.79■■■□□ 2.04
CRNDE-209ENST00000560208 HOXC10Q9NYD6 342 aa27.79■■■□□ 2.04
CRNDE-209ENST00000560208 RPTORQ8N122 1335 aa27.78■■■□□ 2.04
CRNDE-209ENST00000560208 M0R2C6 588 aa27.78■■■□□ 2.04
CRNDE-209ENST00000560208 SLC34A2O95436 690 aa27.78■■■□□ 2.04
CRNDE-209ENST00000560208 GNAT2P19087 354 aa27.78■■■□□ 2.04
CRNDE-209ENST00000560208 WDR78Q5VTH9 848 aa27.78■■■□□ 2.04
CRNDE-209ENST00000560208 KANSL2Q9H9L4 492 aa27.78■■■□□ 2.04
CRNDE-209ENST00000560208 MINDY4BA8MYZ0 360 aa27.77■■■□□ 2.04
CRNDE-209ENST00000560208 RGS2P41220 211 aa27.77■■■□□ 2.04
CRNDE-209ENST00000560208 TRMT44Q8IYL2 757 aaKnown RBP27.77■■■□□ 2.04
CRNDE-209ENST00000560208 SPICE1Q8N0Z3 855 aa27.77■■■□□ 2.04
CRNDE-209ENST00000560208 FSD1Q9BTV5 496 aa27.77■■■□□ 2.04
CRNDE-209ENST00000560208 CRISPLD2Q9H0B8 497 aa27.77■■■□□ 2.04
CRNDE-209ENST00000560208 VCPKMTQ9H867 229 aa27.77■■■□□ 2.04
CRNDE-209ENST00000560208 STAP2Q9UGK3 403 aa27.77■■■□□ 2.04
CRNDE-209ENST00000560208 EEF2P13639 858 aaKnown RBP27.76■■■□□ 2.03
CRNDE-209ENST00000560208 ATP2B2Q01814 1243 aa27.76■■■□□ 2.03
CRNDE-209ENST00000560208 DPF3Q92784 378 aa27.76■■■□□ 2.03
CRNDE-209ENST00000560208 HTATIP2Q9BUP3 242 aa27.76■■■□□ 2.03
CRNDE-209ENST00000560208 EPB41L4AQ9HCS5 686 aaPredicted RBP27.76■■■□□ 2.03
CRNDE-209ENST00000560208 APPP05067 770 aa27.75■■■□□ 2.03
CRNDE-209ENST00000560208 ZKSCAN1P17029 563 aaPredicted RBP27.75■■■□□ 2.03
CRNDE-209ENST00000560208 TDO2P48775 406 aa27.75■■■□□ 2.03
CRNDE-209ENST00000560208 MAP2K5Q13163 448 aa27.75■■■□□ 2.03
CRNDE-209ENST00000560208 STK11IPQ8N1F8 1099 aa27.75■■■□□ 2.03
CRNDE-209ENST00000560208 SEC62Q99442 399 aaKnown RBP27.75■■■□□ 2.03
CRNDE-209ENST00000560208 APBA2Q99767 749 aa27.75■■■□□ 2.03
CRNDE-209ENST00000560208 PATL2C9JE40 543 aaKnown RBP27.74■■■□□ 2.03
CRNDE-209ENST00000560208 PRKAR2AP13861 404 aaKnown RBP27.74■■■□□ 2.03
CRNDE-209ENST00000560208 RASA1P20936 1047 aa27.74■■■□□ 2.03
CRNDE-209ENST00000560208 PTPREP23469 700 aa27.74■■■□□ 2.03
CRNDE-209ENST00000560208 CCL14Q16627 93 aa27.74■■■□□ 2.03
CRNDE-209ENST00000560208 MAP3K21Q5TCX8 1036 aa27.74■■■□□ 2.03
CRNDE-209ENST00000560208 PLEKHM2Q8IWE5 1019 aa27.74■■■□□ 2.03
CRNDE-209ENST00000560208 MKNK2Q9HBH9 465 aa27.74■■■□□ 2.03
CRNDE-209ENST00000560208 GREB1LQ9C091 1923 aaPredicted RBP27.74■■■□□ 2.03
CRNDE-209ENST00000560208 PARP14Q460N5 1801 aa27.74■■■□□ 2.03
CRNDE-209ENST00000560208 SLC15A5A6NIM6 579 aa27.73■■■□□ 2.03
CRNDE-209ENST00000560208 WDR46O15213 610 aaKnown RBP27.73■■■□□ 2.03
CRNDE-209ENST00000560208 FLOT1O75955 427 aa27.73■■■□□ 2.03
CRNDE-209ENST00000560208 DSG3P32926 999 aa27.73■■■□□ 2.03
CRNDE-209ENST00000560208 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.73■■■□□ 2.03
CRNDE-209ENST00000560208 IVNS1ABPQ9Y6Y0 642 aa27.73■■■□□ 2.03
CRNDE-209ENST00000560208 ROBO3Q96MS0 1386 aa27.73■■■□□ 2.03
CRNDE-209ENST00000560208 A0A0G2JMZ2 1700 aa27.72■■■□□ 2.03
CRNDE-209ENST00000560208 H0YGN5 161 aa27.72■■■□□ 2.03
CRNDE-209ENST00000560208 ZMYM1Q5SVZ6 1142 aa27.72■■■□□ 2.03
CRNDE-209ENST00000560208 IFNL3Q8IZI9 196 aa27.72■■■□□ 2.03
CRNDE-209ENST00000560208 MOV10L1Q9BXT6 1211 aaKnown RBP27.72■■■□□ 2.03
CRNDE-209ENST00000560208 PDE4AP27815 886 aa27.71■■■□□ 2.03
CRNDE-209ENST00000560208 CACNB2Q08289 660 aaPredicted RBP27.71■■■□□ 2.03
CRNDE-209ENST00000560208 MB21D1Q8N884 522 aa27.71■■■□□ 2.03
CRNDE-209ENST00000560208 SPATC1LQ9H0A9 340 aa27.71■■■□□ 2.03
CRNDE-209ENST00000560208 GOPCQ9HD26 462 aa27.71■■■□□ 2.03
CRNDE-209ENST00000560208 GRB14Q14449 540 aa27.7■■■□□ 2.02
CRNDE-209ENST00000560208 SAMD1Q6SPF0 538 aaPredicted RBP27.7■■■□□ 2.02
CRNDE-209ENST00000560208 ATG4CQ96DT6 458 aa27.7■■■□□ 2.02
CRNDE-209ENST00000560208 PAWRQ96IZ0 340 aaKnown RBP27.7■■■□□ 2.02
CRNDE-209ENST00000560208 CCDC136Q96JN2 1154 aa27.7■■■□□ 2.02
CRNDE-209ENST00000560208 NACAP1Q9BZK3 213 aa27.7■■■□□ 2.02
CRNDE-209ENST00000560208 ANKLE1Q8NAG6 615 aa27.69■■■□□ 2.02
CRNDE-209ENST00000560208 ZNF287Q9HBT7 754 aa27.69■■■□□ 2.02
CRNDE-209ENST00000560208 COL11A1P12107 1806 aaPredicted RBP27.69■■■□□ 2.02
CRNDE-209ENST00000560208 MYH4Q9Y623 1939 aa27.69■■■□□ 2.02
CRNDE-209ENST00000560208 TRIM6-TRIM34B2RNG4 842 aa27.68■■■□□ 2.02
CRNDE-209ENST00000560208 RAD21O60216 631 aa27.68■■■□□ 2.02
CRNDE-209ENST00000560208 HOXC6P09630 235 aa27.68■■■□□ 2.02
CRNDE-209ENST00000560208 PLS1Q14651 629 aa27.68■■■□□ 2.02
CRNDE-209ENST00000560208 HABP4Q5JVS0 413 aaKnown RBP27.68■■■□□ 2.02
CRNDE-209ENST00000560208 CENPQQ7L2Z9 268 aaPredicted RBP27.68■■■□□ 2.02
CRNDE-209ENST00000560208 ZNF444Q8N0Y2 327 aaPredicted RBP27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms