RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 CYP2D6P10635 497 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 GYS1P13807 737 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 ERCC5P28715 1186 aaPredicted RBP9.24□□□□□ -0.93
SMAD3-212ENST00000559937 CCZ1BP86790 482 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 CCZ1P86791 482 aaPredicted RBP9.24□□□□□ -0.93
SMAD3-212ENST00000559937 ATP2C1P98194 919 aaPredicted RBP9.24□□□□□ -0.93
SMAD3-212ENST00000559937 MORC3Q14149 939 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 NPY5RQ15761 445 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 TTC38Q5R3I4 469 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 SMIM5Q71RC9 77 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 SH3RF1Q7Z6J0 888 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 CCDC82Q8N4S0 544 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 SRBD1Q8N5C6 995 aaKnown RBP9.24□□□□□ -0.93
SMAD3-212ENST00000559937 DAGLBQ8NCG7 672 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 ENOX1Q8TC92 643 aaKnown RBP9.24□□□□□ -0.93
SMAD3-212ENST00000559937 SMARCE1Q969G3 411 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 SHISA4Q96DD7 197 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 CD209Q9NNX6 404 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 IFNKQ9P0W0 207 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 PAXBP1Q9Y5B6 917 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 GREB1LQ9C091 1923 aaPredicted RBP9.24□□□□□ -0.93
SMAD3-212ENST00000559937 BAZ2BQ9UIF8 2168 aaKnown RBP9.24□□□□□ -0.93
SMAD3-212ENST00000559937 FAM205AQ6ZU69 1335 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 RGPD3A6NKT7 1758 aaPredicted RBP9.24□□□□□ -0.93
SMAD3-212ENST00000559937 RGPD4Q7Z3J3 1758 aa9.24□□□□□ -0.93
SMAD3-212ENST00000559937 GPR75-ASB3A0A0A6YYF3 556 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.23□□□□□ -0.93
SMAD3-212ENST00000559937 KLRG2A4D1S0 409 aaPredicted RBP9.23□□□□□ -0.93
SMAD3-212ENST00000559937 SMIM22K7EJ46 135 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 POLR2DO15514 142 aaKnown RBP9.23□□□□□ -0.93
SMAD3-212ENST00000559937 SERPINB2P05120 415 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 SLFN14P0C7P3 912 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 SKILP12757 684 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 SMARCA1P28370 1054 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 GPSM2P81274 684 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 TFAP4Q01664 338 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 SEMA3FQ13275 785 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 SYCP1Q15431 976 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 ARL6IP4Q66PJ3 421 aaKnown RBP9.23□□□□□ -0.93
SMAD3-212ENST00000559937 TMC6Q7Z403 805 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 FOXP4Q8IVH2 680 aaPredicted RBP9.23□□□□□ -0.93
SMAD3-212ENST00000559937 CMTR1Q8N1G2 835 aaKnown RBP9.23□□□□□ -0.93
SMAD3-212ENST00000559937 PNMA1Q8ND90 353 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 CCDC112Q8NEF3 446 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 CCDC148Q8NFR7 591 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 RTFDC1Q9BY42 306 aaPredicted RBP9.23□□□□□ -0.93
SMAD3-212ENST00000559937 CSRNP2Q9H175 543 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 HSD3B7Q9H2F3 369 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 PDCL3Q9H2J4 239 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 SERTAD1Q9UHV2 236 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 GGA1Q9UJY5 639 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 MAN1B1Q9UKM7 699 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 SUGT1Q9Y2Z0 365 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 GAKO14976 1311 aa9.23□□□□□ -0.93
SMAD3-212ENST00000559937 SNED1Q8TER0 1413 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.22□□□□□ -0.93
SMAD3-212ENST00000559937 CCP110O43303 1012 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 UFL1O94874 794 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 USP17L8P0C7I0 530 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 TNNT1P13805 278 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 RASA1P20936 1047 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 SFPQP23246 707 aaKnown RBP eCLIP9.22□□□□□ -0.931e-6■■■□□ 18.3
SMAD3-212ENST00000559937 LMOD1P29536 600 aaPredicted RBP9.22□□□□□ -0.93
SMAD3-212ENST00000559937 PLCD1P51178 756 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 UBASH3AP57075 661 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 NLRP5P59047 1200 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 GRIN1Q05586 938 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 HSP90AA2PQ14568 343 aaPredicted RBP9.22□□□□□ -0.93
SMAD3-212ENST00000559937 R3HDM1Q15032 1099 aaKnown RBP9.22□□□□□ -0.93
SMAD3-212ENST00000559937 TPD52L1Q16890 204 aaPredicted RBP9.22□□□□□ -0.93
SMAD3-212ENST00000559937 FAM47AQ5JRC9 791 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 C16orf86Q6ZW13 317 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 FILIP1Q7Z7B0 1213 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 FCHSD1Q86WN1 690 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 BLIDQ8IZY5 108 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 ZNF444Q8N0Y2 327 aaPredicted RBP9.22□□□□□ -0.93
SMAD3-212ENST00000559937 CCDC24Q8N4L8 307 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 SH3RF3Q8TEJ3 882 aaPredicted RBP9.22□□□□□ -0.93
SMAD3-212ENST00000559937 GSDMAQ96QA5 445 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 LRRC4BQ9NT99 713 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 MYH4Q9Y623 1939 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 PLIN4Q96Q06 1357 aa9.22□□□□□ -0.93
SMAD3-212ENST00000559937 COL11A2P13942 1736 aaPredicted RBP9.22□□□□□ -0.93
SMAD3-212ENST00000559937 ZNF646O15015 1829 aaPredicted RBP9.21□□□□□ -0.93
SMAD3-212ENST00000559937 FAM205CA6NFA0 338 aa9.21□□□□□ -0.94
SMAD3-212ENST00000559937 CTIFO43310 598 aaKnown RBP9.21□□□□□ -0.94
SMAD3-212ENST00000559937 TSPY3P0CV98 308 aa9.21□□□□□ -0.94
SMAD3-212ENST00000559937 TSPY8P0CW00 308 aa9.21□□□□□ -0.94
SMAD3-212ENST00000559937 ZNF18P17022 549 aa9.21□□□□□ -0.94
SMAD3-212ENST00000559937 BMP6P22004 513 aa9.21□□□□□ -0.94
SMAD3-212ENST00000559937 LONP1P36776 959 aaKnown RBP9.21□□□□□ -0.94
SMAD3-212ENST00000559937 ORC2Q13416 577 aaPredicted RBP9.21□□□□□ -0.94
SMAD3-212ENST00000559937 NYAP1Q6ZVC0 841 aa9.21□□□□□ -0.94
SMAD3-212ENST00000559937 VSTM4Q8IW00 320 aa9.21□□□□□ -0.94
SMAD3-212ENST00000559937 CCAR2Q8N163 923 aaKnown RBP9.21□□□□□ -0.94
SMAD3-212ENST00000559937 NEDD1Q8NHV4 660 aa9.21□□□□□ -0.94
SMAD3-212ENST00000559937 FBXW7Q969H0 707 aa9.21□□□□□ -0.94
SMAD3-212ENST00000559937 SPZ1Q9BXG8 430 aa9.21□□□□□ -0.94
SMAD3-212ENST00000559937 MKNK2Q9HBH9 465 aa9.21□□□□□ -0.94
SMAD3-212ENST00000559937 IL17RBQ9NRM6 502 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms