RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 SUPT20HQ8NEM7 779 aa6.29□□□□□ -1.4
SPG11-220ENST00000559933 OSBP2Q969R2 916 aa6.29□□□□□ -1.4
SPG11-220ENST00000559933 ESYT1Q9BSJ8 1104 aa6.29□□□□□ -1.4
SPG11-220ENST00000559933 BACH2Q9BYV9 841 aa6.29□□□□□ -1.4
SPG11-220ENST00000559933 PUS7LQ9H0K6 701 aaKnown RBP6.29□□□□□ -1.4
SPG11-220ENST00000559933 DIAPH3Q9NSV4 1193 aa6.29□□□□□ -1.4
SPG11-220ENST00000559933 GNL3LQ9NVN8 582 aaKnown RBP6.29□□□□□ -1.4
SPG11-220ENST00000559933 LRP2BPQ9P2M1 347 aa6.29□□□□□ -1.4
SPG11-220ENST00000559933 FAM205AQ6ZU69 1335 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 LTBP3Q9NS15 1303 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 USP17L3A6NCW0 530 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 USP17L4A6NCW7 530 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 FOXP2O15409 715 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 RNF113AO15541 343 aaKnown RBP6.28□□□□□ -1.4
SPG11-220ENST00000559933 PRKAB2O43741 272 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 MBD4O95243 580 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 CYP7A1P22680 504 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 ABL2P42684 1182 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 PTH1RQ03431 593 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 SLC4A8Q2Y0W8 1093 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 ZMYM1Q5SVZ6 1142 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 SOGA3Q5TF21 947 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 C9orf131Q5VYM1 1079 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 TTLL5Q6EMB2 1281 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 USP17L1Q7RTZ2 530 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 DZIP1Q86YF9 867 aaKnown RBP6.28□□□□□ -1.4
SPG11-220ENST00000559933 KIAA0825Q8IV33 1275 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 LCORLQ8N3X6 602 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 NSUN4Q96CB9 384 aaKnown RBP6.28□□□□□ -1.4
SPG11-220ENST00000559933 ARMT1Q9H993 441 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 RNF181Q9P0P0 153 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 GJA3Q9Y6H8 435 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 TAF6LQ9Y6J9 622 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 MYH2Q9UKX2 1941 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 RFX7Q2KHR2 1363 aa6.28□□□□□ -1.4
SPG11-220ENST00000559933 PDS5AQ29RF7 1337 aaKnown RBP6.27□□□□□ -1.41
SPG11-220ENST00000559933 SALL1Q9NSC2 1324 aa6.27□□□□□ -1.41
SPG11-220ENST00000559933 DICER1Q9UPY3 1922 aaKnown RBP6.27□□□□□ -1.41
SPG11-220ENST00000559933 A0A1W2PRU2 124 aa6.27□□□□□ -1.41
SPG11-220ENST00000559933 CDC14CA4D256 554 aa6.27□□□□□ -1.41
SPG11-220ENST00000559933 SLC35F4A4IF30 521 aa6.27□□□□□ -1.41
SPG11-220ENST00000559933 SMIM22K7EJ46 135 aa6.27□□□□□ -1.41
SPG11-220ENST00000559933 SGSM2O43147 1006 aa6.27□□□□□ -1.41
SPG11-220ENST00000559933 EGFRP00533 1210 aa6.27□□□□□ -1.41
SPG11-220ENST00000559933 LDHBP07195 334 aaKnown RBP6.27□□□□□ -1.41
SPG11-220ENST00000559933 RNF144AP50876 292 aaPredicted RBP6.27□□□□□ -1.41
SPG11-220ENST00000559933 CXCL9Q07325 125 aa6.27□□□□□ -1.41
SPG11-220ENST00000559933 COL9A3Q14050 684 aaPredicted RBP6.27□□□□□ -1.41
SPG11-220ENST00000559933 TTF1Q15361 905 aaPredicted RBP6.27□□□□□ -1.41
SPG11-220ENST00000559933 NAA16Q6N069 864 aaPredicted RBP6.27□□□□□ -1.41
SPG11-220ENST00000559933 SV2AQ7L0J3 742 aa6.27□□□□□ -1.41
SPG11-220ENST00000559933 ERICH6Q7L0X2 663 aa6.27□□□□□ -1.41
SPG11-220ENST00000559933 PRICKLE2Q7Z3G6 844 aa6.27□□□□□ -1.41
SPG11-220ENST00000559933 WDR66Q8TBY9 1149 aa6.27□□□□□ -1.41
SPG11-220ENST00000559933 LSG1Q9H089 658 aaKnown RBP6.27□□□□□ -1.41
SPG11-220ENST00000559933 ANO2Q9NQ90 1003 aa6.27□□□□□ -1.41
SPG11-220ENST00000559933 AATFQ9NY61 560 aaKnown RBP eCLIP6.27□□□□□ -1.41
SPG11-220ENST00000559933 ZNRF3Q9ULT6 936 aa6.27□□□□□ -1.41
SPG11-220ENST00000559933 TTF2Q9UNY4 1162 aaKnown RBP6.27□□□□□ -1.41
SPG11-220ENST00000559933 SCAF8Q9UPN6 1271 aaKnown RBP6.27□□□□□ -1.41
SPG11-220ENST00000559933 ASTN2O75129 1339 aaPredicted RBP6.26□□□□□ -1.41
SPG11-220ENST00000559933 NAV1Q8NEY1 1877 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 CDK5RAP2Q96SN8 1893 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 DDX60LQ5H9U9 1706 aaKnown RBP6.26□□□□□ -1.41
SPG11-220ENST00000559933 FZD9O00144 591 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 GPAA1O43292 621 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 GPR37L1O60883 481 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 SLURP2P0DP57 97 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 LMNB1P20700 586 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 GPC1P35052 558 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 BTDP43251 543 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 GMPSP49915 693 aaPredicted RBP6.26□□□□□ -1.41
SPG11-220ENST00000559933 CACNB3P54284 484 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 MAP3K12Q12852 859 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 STRIP1Q5VSL9 837 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 FOXD4L5Q5VV16 416 aaPredicted RBP6.26□□□□□ -1.41
SPG11-220ENST00000559933 CIAPIN1Q6FI81 312 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 PODNQ7Z5L7 613 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 SH3RF3Q8TEJ3 882 aaPredicted RBP6.26□□□□□ -1.41
SPG11-220ENST00000559933 SDR42E1Q8WUS8 393 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 APPBP2Q92624 585 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 GDPD2Q9HCC8 539 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 EPB41L4AQ9HCS5 686 aaPredicted RBP6.26□□□□□ -1.41
SPG11-220ENST00000559933 PALD1Q9ULE6 856 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 DAGLAQ9Y4D2 1042 aa6.26□□□□□ -1.41
SPG11-220ENST00000559933 MROH7-TTC4A0A0A0MT08 1334 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 CCDC171Q6TFL3 1326 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 BAZ2AQ9UIF9 1905 aaKnown RBP6.25□□□□□ -1.41
SPG11-220ENST00000559933 DDNO94850 711 aaPredicted RBP6.25□□□□□ -1.41
SPG11-220ENST00000559933 VIL1P09327 827 aaKnown RBP6.25□□□□□ -1.41
SPG11-220ENST00000559933 CYP2D6P10635 497 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 CRKP46108 304 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 UBE3CQ15386 1083 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 MCMDC2Q4G0Z9 681 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 CASC1Q6TDU7 716 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 STK11IPQ8N1F8 1099 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 VWA5B2Q8N398 1253 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 KDF1Q8NAX2 398 aaPredicted RBP6.25□□□□□ -1.41
SPG11-220ENST00000559933 NANOS1Q8WY41 292 aaKnown RBP6.25□□□□□ -1.41
SPG11-220ENST00000559933 JDP2Q8WYK2 163 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms