RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 VWCEQ96DN2 955 aa7.03□□□□□ -1.28
CTDSPL2-207ENST00000559738 KREMEN1Q96MU8 473 aa7.03□□□□□ -1.28
CTDSPL2-207ENST00000559738 DUSP15Q9H1R2 295 aaPredicted RBP7.03□□□□□ -1.28
CTDSPL2-207ENST00000559738 LMCD1Q9NZU5 365 aa7.03□□□□□ -1.28
CTDSPL2-207ENST00000559738 ZSWIM5Q9P217 1185 aa7.03□□□□□ -1.28
CTDSPL2-207ENST00000559738 CTNND2Q9UQB3 1225 aa7.03□□□□□ -1.28
CTDSPL2-207ENST00000559738 POLR2BP30876 1174 aaKnown RBP7.02□□□□□ -1.29
CTDSPL2-207ENST00000559738 TNNI2P48788 182 aa7.02□□□□□ -1.29
CTDSPL2-207ENST00000559738 ZNF165P49910 485 aa7.02□□□□□ -1.29
CTDSPL2-207ENST00000559738 ZNF648Q5T619 568 aaPredicted RBP7.02□□□□□ -1.29
CTDSPL2-207ENST00000559738 CDCP2Q5VXM1 449 aa7.02□□□□□ -1.29
CTDSPL2-207ENST00000559738 C9orf131Q5VYM1 1079 aa7.02□□□□□ -1.29
CTDSPL2-207ENST00000559738 ZSWIM9Q86XI8 627 aa7.02□□□□□ -1.29
CTDSPL2-207ENST00000559738 ATG4CQ96DT6 458 aa7.02□□□□□ -1.29
CTDSPL2-207ENST00000559738 CNNM2Q9H8M5 875 aa7.02□□□□□ -1.29
CTDSPL2-207ENST00000559738 CCDC9Q9Y3X0 531 aaKnown RBP7.02□□□□□ -1.29
CTDSPL2-207ENST00000559738 SRFP11831 508 aa7.01□□□□□ -1.29
CTDSPL2-207ENST00000559738 MLECQ14165 292 aa7.01□□□□□ -1.29
CTDSPL2-207ENST00000559738 KCNMB1Q16558 191 aa7.01□□□□□ -1.29
CTDSPL2-207ENST00000559738 TMEM40Q8WWA1 233 aa7.01□□□□□ -1.29
CTDSPL2-207ENST00000559738 MEIS3P2A8K0S8 358 aa7□□□□□ -1.29
CTDSPL2-207ENST00000559738 ESR1P03372 595 aa7□□□□□ -1.29
CTDSPL2-207ENST00000559738 RAG1P15918 1043 aa7□□□□□ -1.29
CTDSPL2-207ENST00000559738 GBP1P32455 592 aa7□□□□□ -1.29
CTDSPL2-207ENST00000559738 NT5DC4Q86YG4 428 aa7□□□□□ -1.29
CTDSPL2-207ENST00000559738 GPR62Q9BZJ7 368 aa7□□□□□ -1.29
CTDSPL2-207ENST00000559738 GAB4Q2WGN9 574 aa6.99□□□□□ -1.29
CTDSPL2-207ENST00000559738 FYB2Q5VWT5 728 aa6.99□□□□□ -1.29
CTDSPL2-207ENST00000559738 NLRC3Q7RTR2 1065 aa6.99□□□□□ -1.29
CTDSPL2-207ENST00000559738 ZNF654Q8IZM8 581 aa6.99□□□□□ -1.29
CTDSPL2-207ENST00000559738 ZNF428Q96B54 188 aa6.99□□□□□ -1.29
CTDSPL2-207ENST00000559738 ASPNQ9BXN1 380 aa6.99□□□□□ -1.29
CTDSPL2-207ENST00000559738 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
CTDSPL2-207ENST00000559738 C19orf73Q9NVV2 129 aa6.99□□□□□ -1.29
CTDSPL2-207ENST00000559738 KCNH3Q9ULD8 1083 aa6.99□□□□□ -1.29
CTDSPL2-207ENST00000559738 ZNRF3Q9ULT6 936 aa6.99□□□□□ -1.29
CTDSPL2-207ENST00000559738 SHISA3A0PJX4 238 aa6.98□□□□□ -1.29
CTDSPL2-207ENST00000559738 FARP2O94887 1054 aaPredicted RBP6.98□□□□□ -1.29
CTDSPL2-207ENST00000559738 NME1P15531 152 aaKnown RBP6.98□□□□□ -1.29
CTDSPL2-207ENST00000559738 TPP2P29144 1249 aaPredicted RBP6.98□□□□□ -1.29
CTDSPL2-207ENST00000559738 AFMP43652 599 aa6.98□□□□□ -1.29
CTDSPL2-207ENST00000559738 PAK2Q13177 524 aa6.98□□□□□ -1.29
CTDSPL2-207ENST00000559738 ALPK1Q96QP1 1244 aa6.98□□□□□ -1.29
CTDSPL2-207ENST00000559738 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.98□□□□□ -1.29
CTDSPL2-207ENST00000559738 ZNF503-AS2A6NEH8 195 aa6.97□□□□□ -1.29
CTDSPL2-207ENST00000559738 LRRC10BA6NIK2 292 aa6.97□□□□□ -1.29
CTDSPL2-207ENST00000559738 LRRFIP1Q32MZ4 808 aaKnown RBP6.97□□□□□ -1.29
CTDSPL2-207ENST00000559738 TMPRSS7Q7RTY8 843 aa6.97□□□□□ -1.29
CTDSPL2-207ENST00000559738 TSPYL5Q86VY4 417 aaPredicted RBP6.97□□□□□ -1.29
CTDSPL2-207ENST00000559738 KIRREL1Q96J84 757 aa6.97□□□□□ -1.29
CTDSPL2-207ENST00000559738 SLC9A7Q96T83 725 aa6.97□□□□□ -1.29
CTDSPL2-207ENST00000559738 SLAMF8Q9P0V8 285 aa6.97□□□□□ -1.29
CTDSPL2-207ENST00000559738 PPT2Q9UMR5 302 aa6.97□□□□□ -1.29
CTDSPL2-207ENST00000559738 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.97□□□□□ -1.29
CTDSPL2-207ENST00000559738 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.96□□□□□ -1.3
CTDSPL2-207ENST00000559738 TNFRSF10CO14798 259 aa6.96□□□□□ -1.3
CTDSPL2-207ENST00000559738 ACRP10323 421 aa6.96□□□□□ -1.3
CTDSPL2-207ENST00000559738 GDNFP39905 211 aa6.96□□□□□ -1.3
CTDSPL2-207ENST00000559738 JAG1P78504 1218 aa6.96□□□□□ -1.3
CTDSPL2-207ENST00000559738 ZNF124Q15973 351 aa6.96□□□□□ -1.3
CTDSPL2-207ENST00000559738 LCE1DQ5T752 114 aa6.96□□□□□ -1.3
CTDSPL2-207ENST00000559738 NBPF12Q5TAG4 269 aaPredicted RBP6.96□□□□□ -1.3
CTDSPL2-207ENST00000559738 CREG2Q8IUH2 290 aa6.96□□□□□ -1.3
CTDSPL2-207ENST00000559738 TMEM192Q8IY95 271 aa6.96□□□□□ -1.3
CTDSPL2-207ENST00000559738 LIN37Q96GY3 246 aaPredicted RBP6.96□□□□□ -1.3
CTDSPL2-207ENST00000559738 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.96□□□□□ -1.3
CTDSPL2-207ENST00000559738 TRIT1Q9H3H1 467 aaKnown RBP6.96□□□□□ -1.3
CTDSPL2-207ENST00000559738 GINM1Q9NU53 330 aa6.96□□□□□ -1.3
CTDSPL2-207ENST00000559738 GPATCH2Q9NW75 528 aa6.96□□□□□ -1.3
CTDSPL2-207ENST00000559738 RAD51AP2Q09MP3 1159 aa6.95□□□□□ -1.3
CTDSPL2-207ENST00000559738 FZD5Q13467 585 aa6.95□□□□□ -1.3
CTDSPL2-207ENST00000559738 MLANAQ16655 118 aa6.95□□□□□ -1.3
CTDSPL2-207ENST00000559738 KSR1Q8IVT5 923 aa6.95□□□□□ -1.3
CTDSPL2-207ENST00000559738 ZNF512BQ96KM6 892 aaPredicted RBP6.95□□□□□ -1.3
CTDSPL2-207ENST00000559738 DNAJC25-GNG10A0A024R161 153 aa6.94□□□□□ -1.3
CTDSPL2-207ENST00000559738 GLI1P08151 1106 aa6.94□□□□□ -1.3
CTDSPL2-207ENST00000559738 CCNFP41002 786 aa6.94□□□□□ -1.3
CTDSPL2-207ENST00000559738 RNF4P78317 190 aa6.94□□□□□ -1.3
CTDSPL2-207ENST00000559738 SNW1Q13573 536 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-207ENST00000559738 PKN1Q16512 942 aa6.94□□□□□ -1.3
CTDSPL2-207ENST00000559738 NBPF9Q3BBW0 867 aa6.94□□□□□ -1.3
CTDSPL2-207ENST00000559738 RALGPS1Q5JS13 557 aa6.94□□□□□ -1.3
CTDSPL2-207ENST00000559738 MPZL3Q6UWV2 235 aa6.94□□□□□ -1.3
CTDSPL2-207ENST00000559738 CCDC120Q96HB5 630 aa6.94□□□□□ -1.3
CTDSPL2-207ENST00000559738 FERD3LQ96RJ6 166 aa6.94□□□□□ -1.3
CTDSPL2-207ENST00000559738 FAM53CQ9NYF3 392 aa6.94□□□□□ -1.3
CTDSPL2-207ENST00000559738 DUSP13Q9UII6 198 aa6.94□□□□□ -1.3
CTDSPL2-207ENST00000559738 FAM86C2PA6NEL3 165 aa6.93□□□□□ -1.3
CTDSPL2-207ENST00000559738 CLEC3AO75596 197 aa6.93□□□□□ -1.3
CTDSPL2-207ENST00000559738 IMPDH2P12268 514 aa6.93□□□□□ -1.3
CTDSPL2-207ENST00000559738 GJA8P48165 433 aa6.93□□□□□ -1.3
CTDSPL2-207ENST00000559738 SOX9P48436 509 aa6.93□□□□□ -1.3
CTDSPL2-207ENST00000559738 CHMP4BP1P59074 171 aa6.93□□□□□ -1.3
CTDSPL2-207ENST00000559738 TMEM67Q5HYA8 995 aa6.93□□□□□ -1.3
CTDSPL2-207ENST00000559738 INTS3Q68E01 1043 aaKnown RBP6.93□□□□□ -1.3
CTDSPL2-207ENST00000559738 CCDC81Q6ZN84 652 aa6.93□□□□□ -1.3
CTDSPL2-207ENST00000559738 RUFY4Q6ZNE9 571 aa6.93□□□□□ -1.3
CTDSPL2-207ENST00000559738 TMC3Q7Z5M5 1100 aa6.93□□□□□ -1.3
CTDSPL2-207ENST00000559738 TTC6Q86TZ1 520 aa6.93□□□□□ -1.3
CTDSPL2-207ENST00000559738 RBBP8NLQ8NC74 664 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms