RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 PCDH11XQ9BZA7 1347 aa8.34□□□□□ -1.07
CRNDE-207ENST00000559598 PCDH11YQ9BZA8 1340 aa8.34□□□□□ -1.07
CRNDE-207ENST00000559598 PXDNLA1KZ92 1463 aa8.34□□□□□ -1.07
CRNDE-207ENST00000559598 A0A096LPE4 126 aa8.34□□□□□ -1.07
CRNDE-207ENST00000559598 A0A1W2PPZ6 126 aa8.34□□□□□ -1.07
CRNDE-207ENST00000559598 CD68P34810 354 aaPredicted RBP8.34□□□□□ -1.07
CRNDE-207ENST00000559598 GRIA4P48058 902 aa8.34□□□□□ -1.07
CRNDE-207ENST00000559598 TGFB2P61812 414 aa8.34□□□□□ -1.07
CRNDE-207ENST00000559598 IKBKEQ14164 716 aa8.34□□□□□ -1.07
CRNDE-207ENST00000559598 MBTPS1Q14703 1052 aa8.34□□□□□ -1.07
CRNDE-207ENST00000559598 OSGEPQ9NPF4 335 aa8.34□□□□□ -1.07
CRNDE-207ENST00000559598 TERF2IPQ9NYB0 399 aa8.34□□□□□ -1.07
CRNDE-207ENST00000559598 DYRK3O43781 588 aa8.33□□□□□ -1.08
CRNDE-207ENST00000559598 SBF1O95248 1867 aa8.33□□□□□ -1.08
CRNDE-207ENST00000559598 GRM2Q14416 872 aa8.33□□□□□ -1.08
CRNDE-207ENST00000559598 FOXD4L6Q3SYB3 417 aaPredicted RBP8.33□□□□□ -1.08
CRNDE-207ENST00000559598 PI16Q6UXB8 463 aa8.33□□□□□ -1.08
CRNDE-207ENST00000559598 FOXD4L3Q6VB84 417 aaPredicted RBP8.33□□□□□ -1.08
CRNDE-207ENST00000559598 SLC7A3Q8WY07 619 aa8.33□□□□□ -1.08
CRNDE-207ENST00000559598 RAPGEF4Q8WZA2 1011 aa8.33□□□□□ -1.08
CRNDE-207ENST00000559598 MRPL18Q9H0U6 180 aaKnown RBP8.33□□□□□ -1.08
CRNDE-207ENST00000559598 ZNF831Q5JPB2 1677 aa8.33□□□□□ -1.08
CRNDE-207ENST00000559598 A0A1W2PP64 1363 aa8.33□□□□□ -1.08
CRNDE-207ENST00000559598 KDM2BQ8NHM5 1336 aa8.32□□□□□ -1.08
CRNDE-207ENST00000559598 ANKRD33BA6NCL7 494 aa8.32□□□□□ -1.08
CRNDE-207ENST00000559598 P4HBP07237 508 aaKnown RBP8.32□□□□□ -1.08
CRNDE-207ENST00000559598 HOXC9P31274 260 aa8.32□□□□□ -1.08
CRNDE-207ENST00000559598 AMPHP49418 695 aa8.32□□□□□ -1.08
CRNDE-207ENST00000559598 ARL4DP49703 201 aa8.32□□□□□ -1.08
CRNDE-207ENST00000559598 SPRED3Q2MJR0 410 aa8.32□□□□□ -1.08
CRNDE-207ENST00000559598 PRPF40BQ6NWY9 871 aaKnown RBP8.32□□□□□ -1.08
CRNDE-207ENST00000559598 TXNRD3Q86VQ6 643 aa8.32□□□□□ -1.08
CRNDE-207ENST00000559598 KLHDC7BQ96G42 594 aa8.32□□□□□ -1.08
CRNDE-207ENST00000559598 LTV1Q96GA3 475 aaPredicted RBP8.32□□□□□ -1.08
CRNDE-207ENST00000559598 NMRK2Q9NPI5 230 aa8.32□□□□□ -1.08
CRNDE-207ENST00000559598 C4AP0C0L4 1744 aa8.32□□□□□ -1.08
CRNDE-207ENST00000559598 MAP3K19Q56UN5 1328 aa8.31□□□□□ -1.08
CRNDE-207ENST00000559598 SOX1O00570 391 aaPredicted RBP8.31□□□□□ -1.08
CRNDE-207ENST00000559598 H2AFB1P0C5Y9 115 aa8.31□□□□□ -1.08
CRNDE-207ENST00000559598 H2AFB2P0C5Z0 115 aa8.31□□□□□ -1.08
CRNDE-207ENST00000559598 ESRRAP11474 423 aaPredicted RBP8.31□□□□□ -1.08
CRNDE-207ENST00000559598 C19orf57Q0VDD7 668 aa8.31□□□□□ -1.08
CRNDE-207ENST00000559598 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.31□□□□□ -1.08
CRNDE-207ENST00000559598 ALG1LQ6GMV1 187 aa8.31□□□□□ -1.08
CRNDE-207ENST00000559598 GLIS3Q8NEA6 775 aa8.31□□□□□ -1.08
CRNDE-207ENST00000559598 FBF1Q8TES7 1133 aa8.31□□□□□ -1.08
CRNDE-207ENST00000559598 COG3Q96JB2 828 aa8.31□□□□□ -1.08
CRNDE-207ENST00000559598 PUS7Q96PZ0 661 aaKnown RBP8.31□□□□□ -1.08
CRNDE-207ENST00000559598 SETDB2Q96T68 719 aa8.31□□□□□ -1.08
CRNDE-207ENST00000559598 CLEC4MQ9H2X3 399 aaPredicted RBP8.31□□□□□ -1.08
CRNDE-207ENST00000559598 ABCB6Q9NP58 842 aa8.31□□□□□ -1.08
CRNDE-207ENST00000559598 KCNK4Q9NYG8 393 aa8.31□□□□□ -1.08
CRNDE-207ENST00000559598 DDX3YO15523 660 aaKnown RBP8.3□□□□□ -1.08
CRNDE-207ENST00000559598 ADAM11O75078 769 aa8.3□□□□□ -1.08
CRNDE-207ENST00000559598 ITPKAP23677 461 aa8.3□□□□□ -1.08
CRNDE-207ENST00000559598 ATP2B2Q01814 1243 aa8.3□□□□□ -1.08
CRNDE-207ENST00000559598 CCDC27Q2M243 656 aa8.3□□□□□ -1.08
CRNDE-207ENST00000559598 HGSNATQ68CP4 663 aa8.3□□□□□ -1.08
CRNDE-207ENST00000559598 DNAJC14Q6Y2X3 702 aaPredicted RBP8.3□□□□□ -1.08
CRNDE-207ENST00000559598 TMEM130Q8N3G9 435 aa8.3□□□□□ -1.08
CRNDE-207ENST00000559598 SMC1BQ8NDV3 1235 aa8.3□□□□□ -1.08
CRNDE-207ENST00000559598 WFDC12Q8WWY7 111 aa8.3□□□□□ -1.08
CRNDE-207ENST00000559598 ZNF576Q9H609 170 aa8.3□□□□□ -1.08
CRNDE-207ENST00000559598 SOX17Q9H6I2 414 aaPredicted RBP8.3□□□□□ -1.08
CRNDE-207ENST00000559598 WWC3Q9ULE0 1092 aa8.3□□□□□ -1.08
CRNDE-207ENST00000559598 KIF24Q5T7B8 1368 aa8.3□□□□□ -1.08
CRNDE-207ENST00000559598 KCPQ6ZWJ8 1503 aa8.29□□□□□ -1.08
CRNDE-207ENST00000559598 COL5A3P25940 1745 aaPredicted RBP8.29□□□□□ -1.08
CRNDE-207ENST00000559598 TMEM238LA0A1B0GVL6 79 aa8.29□□□□□ -1.08
CRNDE-207ENST00000559598 SCO2A0A1W2PP80 73 aa8.29□□□□□ -1.08
CRNDE-207ENST00000559598 F8W735 103 aaPredicted RBP8.29□□□□□ -1.08
CRNDE-207ENST00000559598 WISP1O95388 367 aa8.29□□□□□ -1.08
CRNDE-207ENST00000559598 MMP10P09238 476 aa8.29□□□□□ -1.08
CRNDE-207ENST00000559598 NOS3P29474 1203 aa8.29□□□□□ -1.08
CRNDE-207ENST00000559598 IREB2P48200 963 aaKnown RBP8.29□□□□□ -1.08
CRNDE-207ENST00000559598 PTPN12Q05209 780 aaKnown RBP8.29□□□□□ -1.08
CRNDE-207ENST00000559598 PCDH1Q08174 1060 aa8.29□□□□□ -1.08
CRNDE-207ENST00000559598 COL19A1Q14993 1142 aa8.29□□□□□ -1.08
CRNDE-207ENST00000559598 MPRIPQ6WCQ1 1025 aa8.29□□□□□ -1.08
CRNDE-207ENST00000559598 ARHGAP27Q6ZUM4 889 aa8.29□□□□□ -1.08
CRNDE-207ENST00000559598 FOXD4L4Q8WXT5 416 aaPredicted RBP8.29□□□□□ -1.08
CRNDE-207ENST00000559598 BCO2Q9BYV7 579 aa8.29□□□□□ -1.08
CRNDE-207ENST00000559598 AKTIPQ9H8T0 292 aa8.29□□□□□ -1.08
CRNDE-207ENST00000559598 KIF20BQ96Q89 1820 aa8.29□□□□□ -1.08
CRNDE-207ENST00000559598 HSPA1AP0DMV8 641 aaKnown RBP8.28□□□□□ -1.08
CRNDE-207ENST00000559598 HSPA1BP0DMV9 641 aaKnown RBP8.28□□□□□ -1.08
CRNDE-207ENST00000559598 NLRP12P59046 1061 aa8.28□□□□□ -1.08
CRNDE-207ENST00000559598 ZNF423Q2M1K9 1284 aa8.28□□□□□ -1.08
CRNDE-207ENST00000559598 C9orf131Q5VYM1 1079 aa8.28□□□□□ -1.08
CRNDE-207ENST00000559598 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.28□□□□□ -1.08
CRNDE-207ENST00000559598 NLGN1Q8N2Q7 840 aa8.28□□□□□ -1.08
CRNDE-207ENST00000559598 PPP4R2Q9NY27 417 aa8.28□□□□□ -1.08
CRNDE-207ENST00000559598 INSRP06213 1382 aa8.27□□□□□ -1.09
CRNDE-207ENST00000559598 ALX3O95076 343 aa8.27□□□□□ -1.09
CRNDE-207ENST00000559598 LDHBP07195 334 aaKnown RBP8.27□□□□□ -1.09
CRNDE-207ENST00000559598 HTRA3P83110 453 aa8.27□□□□□ -1.09
CRNDE-207ENST00000559598 DUOXA2Q1HG44 320 aa8.27□□□□□ -1.09
CRNDE-207ENST00000559598 PRSS36Q5K4E3 855 aa8.27□□□□□ -1.09
CRNDE-207ENST00000559598 NBPF6Q5VWK0 638 aa8.27□□□□□ -1.09
CRNDE-207ENST00000559598 NXPE4Q6UWF7 544 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms