RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 DCP1AQ9NPI6 582 aaPredicted RBP15.86■□□□□ 0.13
TPM1-220ENST00000559556 MCM9Q9NXL9 1143 aa15.86■□□□□ 0.13
TPM1-220ENST00000559556 IVNS1ABPQ9Y6Y0 642 aa15.86■□□□□ 0.13
TPM1-220ENST00000559556 VCANP13611 3396 aa15.86■□□□□ 0.13
TPM1-220ENST00000559556 GBF1Q92538 1859 aa15.85■□□□□ 0.13
TPM1-220ENST00000559556 A0A1W2PRG0 241 aa15.85■□□□□ 0.13
TPM1-220ENST00000559556 GOLIM4O00461 696 aa15.85■□□□□ 0.13
TPM1-220ENST00000559556 IGHA2P01877 340 aa15.85■□□□□ 0.13
TPM1-220ENST00000559556 LRRC26Q2I0M4 334 aa15.85■□□□□ 0.13
TPM1-220ENST00000559556 LRIT3Q3SXY7 679 aa15.85■□□□□ 0.13
TPM1-220ENST00000559556 WDR78Q5VTH9 848 aa15.85■□□□□ 0.13
TPM1-220ENST00000559556 RPAP2Q8IXW5 612 aaPredicted RBP15.85■□□□□ 0.13
TPM1-220ENST00000559556 TDHQ8IZJ6 230 aa15.85■□□□□ 0.13
TPM1-220ENST00000559556 LCORLQ8N3X6 602 aa15.85■□□□□ 0.13
TPM1-220ENST00000559556 DNAJC2Q99543 621 aaKnown RBP15.85■□□□□ 0.13
TPM1-220ENST00000559556 MSCO60682 206 aa15.84■□□□□ 0.13
TPM1-220ENST00000559556 HMMRO75330 724 aa15.84■□□□□ 0.13
TPM1-220ENST00000559556 COG2Q14746 738 aa15.84■□□□□ 0.13
TPM1-220ENST00000559556 TMEM179Q6ZVK1 233 aa15.84■□□□□ 0.13
TPM1-220ENST00000559556 SIRT2Q8IXJ6 389 aa15.84■□□□□ 0.13
TPM1-220ENST00000559556 NPLOC4Q8TAT6 608 aa15.84■□□□□ 0.13
TPM1-220ENST00000559556 SWAP70Q9UH65 585 aa15.84■□□□□ 0.13
TPM1-220ENST00000559556 DDX19BQ9UMR2 479 aa15.84■□□□□ 0.13
TPM1-220ENST00000559556 MPHOSPH10O00566 681 aaKnown RBP15.83■□□□□ 0.12
TPM1-220ENST00000559556 IFIT2P09913 472 aaKnown RBP15.83■□□□□ 0.12
TPM1-220ENST00000559556 CYBAP13498 195 aa15.83■□□□□ 0.12
TPM1-220ENST00000559556 SLC44A5Q8NCS7 719 aa15.83■□□□□ 0.12
TPM1-220ENST00000559556 SHCBP1Q8NEM2 672 aa15.83■□□□□ 0.12
TPM1-220ENST00000559556 MOV10L1Q9BXT6 1211 aaKnown RBP15.83■□□□□ 0.12
TPM1-220ENST00000559556 TANGO6Q9C0B7 1094 aa15.83■□□□□ 0.12
TPM1-220ENST00000559556 ZBTB40Q9NUA8 1239 aa15.83■□□□□ 0.12
TPM1-220ENST00000559556 PAG1Q9NWQ8 432 aa15.83■□□□□ 0.12
TPM1-220ENST00000559556 HOXC10Q9NYD6 342 aa15.83■□□□□ 0.12
TPM1-220ENST00000559556 DDX20Q9UHI6 824 aaKnown RBP15.83■□□□□ 0.12
TPM1-220ENST00000559556 LCTP09848 1927 aa15.83■□□□□ 0.12
TPM1-220ENST00000559556 MYH6P13533 1939 aa15.83■□□□□ 0.12
TPM1-220ENST00000559556 NCOR1O75376 2440 aa15.83■□□□□ 0.12
TPM1-220ENST00000559556 APBB1O00213 710 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 STRNO43815 780 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 RAB11FIP3O75154 756 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 CYP2D6P10635 497 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 ADORA2AP29274 412 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 ADD2P35612 726 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 ATP2B2Q01814 1243 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 KIAA1755Q5JYT7 1200 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 OLFML2BQ68BL8 750 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 MB21D1Q8N884 522 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 TRPV1Q8NER1 839 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 LPAR1Q92633 364 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 UBE2OQ9C0C9 1292 aaKnown RBP15.82■□□□□ 0.12
TPM1-220ENST00000559556 SPATC1LQ9H0A9 340 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 ARMT1Q9H993 441 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 ATP8A2Q9NTI2 1148 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 LRRC37A2A6NM11 1700 aa15.82■□□□□ 0.12
TPM1-220ENST00000559556 DNM1LO00429 736 aa15.81■□□□□ 0.12
TPM1-220ENST00000559556 MBD4O95243 580 aa15.81■□□□□ 0.12
TPM1-220ENST00000559556 ATP5JP18859 108 aa15.81■□□□□ 0.12
TPM1-220ENST00000559556 CYP2C19P33261 490 aa15.81■□□□□ 0.12
TPM1-220ENST00000559556 ARHGEF10LQ9HCE6 1279 aa15.81■□□□□ 0.12
TPM1-220ENST00000559556 AKR1B1P15121 316 aa15.8■□□□□ 0.12
TPM1-220ENST00000559556 CNGA1P29973 690 aa15.8■□□□□ 0.12
TPM1-220ENST00000559556 ICA1Q05084 483 aa15.8■□□□□ 0.12
TPM1-220ENST00000559556 DPP9Q86TI2 863 aa15.8■□□□□ 0.12
TPM1-220ENST00000559556 CLEC10AQ8IUN9 316 aa15.8■□□□□ 0.12
TPM1-220ENST00000559556 SIAH1Q8IUQ4 282 aa15.8■□□□□ 0.12
TPM1-220ENST00000559556 DYNLL2Q96FJ2 89 aa15.8■□□□□ 0.12
TPM1-220ENST00000559556 HAUS7Q99871 368 aa15.8■□□□□ 0.12
TPM1-220ENST00000559556 SENP6Q9GZR1 1112 aaPredicted RBP15.8■□□□□ 0.12
TPM1-220ENST00000559556 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.8■□□□□ 0.12
TPM1-220ENST00000559556 SH2D4AQ9H788 454 aa15.8■□□□□ 0.12
TPM1-220ENST00000559556 VCPKMTQ9H867 229 aa15.8■□□□□ 0.12
TPM1-220ENST00000559556 COG6Q9Y2V7 657 aa15.8■□□□□ 0.12
TPM1-220ENST00000559556 TMX2Q9Y320 296 aa15.8■□□□□ 0.12
TPM1-220ENST00000559556 TTC28Q96AY4 2481 aa15.79■□□□□ 0.12
TPM1-220ENST00000559556 WDR46O15213 610 aaKnown RBP15.79■□□□□ 0.12
TPM1-220ENST00000559556 PRKAB2O43741 272 aa15.79■□□□□ 0.12
TPM1-220ENST00000559556 ERCC3P19447 782 aa15.79■□□□□ 0.12
TPM1-220ENST00000559556 DSG3P32926 999 aa15.79■□□□□ 0.12
TPM1-220ENST00000559556 SLFNL1Q499Z3 407 aa15.79■□□□□ 0.12
TPM1-220ENST00000559556 C12orf60Q5U649 245 aa15.79■□□□□ 0.12
TPM1-220ENST00000559556 C16orf86Q6ZW13 317 aa15.79■□□□□ 0.12
TPM1-220ENST00000559556 ABRAQ8N0Z2 381 aa15.79■□□□□ 0.12
TPM1-220ENST00000559556 DEFB123Q8N688 67 aa15.79■□□□□ 0.12
TPM1-220ENST00000559556 CCDC17Q96LX7 622 aa15.79■□□□□ 0.12
TPM1-220ENST00000559556 BOLA2Q9H3K6 86 aa15.79■□□□□ 0.12
TPM1-220ENST00000559556 MROH8Q9H579 483 aa15.79■□□□□ 0.12
TPM1-220ENST00000559556 CHD9Q3L8U1 2897 aa15.79■□□□□ 0.12
TPM1-220ENST00000559556 FLOT1O75955 427 aa15.78■□□□□ 0.12
TPM1-220ENST00000559556 CDK8P49336 464 aa15.78■□□□□ 0.12
TPM1-220ENST00000559556 MDM2Q00987 491 aaPredicted RBP15.78■□□□□ 0.12
TPM1-220ENST00000559556 UBE3CQ15386 1083 aa15.78■□□□□ 0.12
TPM1-220ENST00000559556 DIEXFQ68CQ4 756 aaKnown RBP15.78■□□□□ 0.12
TPM1-220ENST00000559556 SLC17A8Q8NDX2 589 aa15.78■□□□□ 0.12
TPM1-220ENST00000559556 ATG4CQ96DT6 458 aa15.78■□□□□ 0.12
TPM1-220ENST00000559556 TRANK1O15050 2925 aa15.78■□□□□ 0.12
TPM1-220ENST00000559556 SPTBN5Q9NRC6 3674 aaKnown RBP15.77■□□□□ 0.12
TPM1-220ENST00000559556 CYP2D7A0A087X1C5 515 aa15.77■□□□□ 0.12
TPM1-220ENST00000559556 SMIM22K7EJ46 135 aa15.77■□□□□ 0.12
TPM1-220ENST00000559556 SEPT4O43236 478 aa15.77■□□□□ 0.12
TPM1-220ENST00000559556 COBLO75128 1261 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms