RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 TNKSO95271 1327 aa12.87□□□□□ -0.35
TPM1-217ENST00000559108 NDUFB10O96000 172 aa12.86□□□□□ -0.35
TPM1-217ENST00000559108 CYP2C8P10632 490 aa12.86□□□□□ -0.35
TPM1-217ENST00000559108 ANKRD23Q86SG2 305 aa12.86□□□□□ -0.35
TPM1-217ENST00000559108 NCOA7Q8NI08 942 aa12.86□□□□□ -0.35
TPM1-217ENST00000559108 ZSCAN10Q96SZ4 725 aaPredicted RBP12.86□□□□□ -0.35
TPM1-217ENST00000559108 KRT23Q9C075 422 aa12.86□□□□□ -0.35
TPM1-217ENST00000559108 ZNF287Q9HBT7 754 aa12.86□□□□□ -0.35
TPM1-217ENST00000559108 FBXO28Q9NVF7 368 aa12.86□□□□□ -0.35
TPM1-217ENST00000559108 STX8Q9UNK0 236 aa12.86□□□□□ -0.35
TPM1-217ENST00000559108 AGTPBP1Q9UPW5 1226 aa12.86□□□□□ -0.35
TPM1-217ENST00000559108 SMCHD1A6NHR9 2005 aa12.86□□□□□ -0.35
TPM1-217ENST00000559108 F5H6K3 240 aa12.85□□□□□ -0.35
TPM1-217ENST00000559108 PDHXO00330 501 aa12.85□□□□□ -0.35
TPM1-217ENST00000559108 TBC1D8O95759 1140 aa12.85□□□□□ -0.35
TPM1-217ENST00000559108 TTLL1O95922 423 aa12.85□□□□□ -0.35
TPM1-217ENST00000559108 EXOSC10Q01780 885 aaKnown RBP12.85□□□□□ -0.35
TPM1-217ENST00000559108 KLRC3Q07444 240 aa12.85□□□□□ -0.35
TPM1-217ENST00000559108 CRHR2Q13324 411 aa12.85□□□□□ -0.35
TPM1-217ENST00000559108 USP17L2Q6R6M4 530 aa12.85□□□□□ -0.35
TPM1-217ENST00000559108 IGDCC4Q8TDY8 1250 aa12.85□□□□□ -0.35
TPM1-217ENST00000559108 ANKS1AQ92625 1134 aa12.85□□□□□ -0.35
TPM1-217ENST00000559108 KIF2CQ99661 725 aa12.85□□□□□ -0.35
TPM1-217ENST00000559108 TBC1D2Q9BYX2 928 aa12.85□□□□□ -0.35
TPM1-217ENST00000559108 CNNM2Q9H8M5 875 aa12.85□□□□□ -0.35
TPM1-217ENST00000559108 ARHGEF10LQ9HCE6 1279 aa12.85□□□□□ -0.35
TPM1-217ENST00000559108 CASP8AP2Q9UKL3 1982 aa12.85□□□□□ -0.35
TPM1-217ENST00000559108 PLXNB2O15031 1838 aa12.84□□□□□ -0.35
TPM1-217ENST00000559108 C19orf81C9J6K1 198 aa12.84□□□□□ -0.35
TPM1-217ENST00000559108 SH2B2O14492 632 aaPredicted RBP12.84□□□□□ -0.35
TPM1-217ENST00000559108 FOXN1O15353 648 aa12.84□□□□□ -0.35
TPM1-217ENST00000559108 EPB41L2O43491 1005 aaKnown RBP12.84□□□□□ -0.35
TPM1-217ENST00000559108 PRC1O43663 620 aa12.84□□□□□ -0.35
TPM1-217ENST00000559108 TRPA1O75762 1119 aa12.84□□□□□ -0.35
TPM1-217ENST00000559108 SREBF2Q12772 1141 aa12.84□□□□□ -0.35
TPM1-217ENST00000559108 PROCA1Q8NCQ7 364 aaPredicted RBP12.84□□□□□ -0.35
TPM1-217ENST00000559108 IL17RAQ96F46 866 aa12.84□□□□□ -0.35
TPM1-217ENST00000559108 JAKMIP1Q96N16 626 aaKnown RBP12.84□□□□□ -0.35
TPM1-217ENST00000559108 NEK1Q96PY6 1258 aa12.84□□□□□ -0.35
TPM1-217ENST00000559108 ASCC2Q9H1I8 757 aaPredicted RBP12.84□□□□□ -0.35
TPM1-217ENST00000559108 RPAP3Q9H6T3 665 aaPredicted RBP12.84□□□□□ -0.35
TPM1-217ENST00000559108 LY9Q9HBG7 655 aa12.84□□□□□ -0.35
TPM1-217ENST00000559108 HSPA1AP0DMV8 641 aaKnown RBP12.83□□□□□ -0.36
TPM1-217ENST00000559108 HSPA1BP0DMV9 641 aaKnown RBP12.83□□□□□ -0.36
TPM1-217ENST00000559108 TOP1P11387 765 aaKnown RBP12.83□□□□□ -0.36
TPM1-217ENST00000559108 SLC35G1Q2M3R5 365 aa12.83□□□□□ -0.36
TPM1-217ENST00000559108 FAM83BQ5T0W9 1011 aa12.83□□□□□ -0.36
TPM1-217ENST00000559108 FASTKD5Q7L8L6 764 aaKnown RBP12.83□□□□□ -0.36
TPM1-217ENST00000559108 RALYLQ86SE5 291 aaKnown RBP12.83□□□□□ -0.36
TPM1-217ENST00000559108 GMCL1P1Q8NEA9 526 aa12.83□□□□□ -0.36
TPM1-217ENST00000559108 BACH2Q9BYV9 841 aa12.83□□□□□ -0.36
TPM1-217ENST00000559108 UPF3BQ9BZI7 483 aaKnown RBP12.83□□□□□ -0.36
TPM1-217ENST00000559108 CPVLQ9H3G5 476 aa12.83□□□□□ -0.36
TPM1-217ENST00000559108 MTMR7Q9Y216 660 aa12.83□□□□□ -0.36
TPM1-217ENST00000559108 CNMDO75829 334 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 SNHG28P0DPA3 235 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 PDHBP11177 359 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 CTGFP29279 349 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 HOXA7P31268 230 aaPredicted RBP12.82□□□□□ -0.36
TPM1-217ENST00000559108 INHBEP58166 350 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 TAF1CQ15572 869 aaPredicted RBP12.82□□□□□ -0.36
TPM1-217ENST00000559108 RNF20Q5VTR2 975 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 SLFN13Q68D06 897 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 TTBK2Q6IQ55 1244 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 CATSPERGQ6ZRH7 1159 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 DGKHQ86XP1 1220 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 RAB11FIP4Q86YS3 637 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 P2RX7Q99572 595 aaKnown RBP12.82□□□□□ -0.36
TPM1-217ENST00000559108 MYL10Q9BUA6 226 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 TXNRD2Q9NNW7 524 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 TMOD4Q9NZQ9 345 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 BRPF3Q9ULD4 1205 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 DOCK3Q8IZD9 2030 aa12.82□□□□□ -0.36
TPM1-217ENST00000559108 FRMPD2Q68DX3 1309 aaPredicted RBP12.82□□□□□ -0.36
TPM1-217ENST00000559108 SPDYE16A6NNV3 312 aaPredicted RBP12.81□□□□□ -0.36
TPM1-217ENST00000559108 IFIT3O14879 490 aaKnown RBP12.81□□□□□ -0.36
TPM1-217ENST00000559108 CA12O43570 354 aa12.81□□□□□ -0.36
TPM1-217ENST00000559108 HSPA8P11142 646 aaKnown RBP12.81□□□□□ -0.36
TPM1-217ENST00000559108 TAL1P17542 331 aaPredicted RBP12.81□□□□□ -0.36
TPM1-217ENST00000559108 RPS6KB1P23443 525 aa12.81□□□□□ -0.36
TPM1-217ENST00000559108 MCCP23508 829 aa12.81□□□□□ -0.36
TPM1-217ENST00000559108 MCM5P33992 734 aa12.81□□□□□ -0.36
TPM1-217ENST00000559108 USP14P54578 494 aa12.81□□□□□ -0.36
TPM1-217ENST00000559108 MAP2K1Q02750 393 aaPredicted RBP12.81□□□□□ -0.36
TPM1-217ENST00000559108 TRDNQ13061 729 aa12.81□□□□□ -0.36
TPM1-217ENST00000559108 TMEM67Q5HYA8 995 aa12.81□□□□□ -0.36
TPM1-217ENST00000559108 KCTD1Q719H9 257 aa12.81□□□□□ -0.36
TPM1-217ENST00000559108 IQCA1Q86XH1 822 aa12.81□□□□□ -0.36
TPM1-217ENST00000559108 UBAC1Q9BSL1 405 aa12.81□□□□□ -0.36
TPM1-217ENST00000559108 CFHR5Q9BXR6 569 aa12.81□□□□□ -0.36
TPM1-217ENST00000559108 ZSWIM6Q9HCJ5 1215 aa12.81□□□□□ -0.36
TPM1-217ENST00000559108 CPA4Q9UI42 421 aa12.81□□□□□ -0.36
TPM1-217ENST00000559108 SYNPO2Q9UMS6 1093 aa12.81□□□□□ -0.36
TPM1-217ENST00000559108 SLC45A1Q9Y2W3 748 aa12.81□□□□□ -0.36
TPM1-217ENST00000559108 LCTP09848 1927 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 MYH6P13533 1939 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 BAZ2BQ9UIF8 2168 aaKnown RBP12.8□□□□□ -0.36
TPM1-217ENST00000559108 WDR46O15213 610 aaKnown RBP12.8□□□□□ -0.36
TPM1-217ENST00000559108 RAD21O60216 631 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 GOLGA8HP0CJ92 632 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms