RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 PTPN18Q99952 460 aa7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 R3HDMLQ9H3Y0 253 aa7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 HTTP42858 3142 aa7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 DOCK1Q14185 1865 aa7.32□□□□□ -1.24
CTDSPL2-204ENST00000558966 MYH7P12883 1935 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 DDX60LQ5H9U9 1706 aaKnown RBP7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 PHIPQ8WWQ0 1821 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 PHF20L1A8MW92 1017 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 GOLIM4O00461 696 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 TBC1D8O95759 1140 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 BAG3O95817 575 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 F12P00748 615 aaPredicted RBP7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 ATP5JP18859 108 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 CTHP32929 405 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 MAP3K12Q12852 859 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 NOL9Q5SY16 702 aaKnown RBP7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 ERO1BQ86YB8 467 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 ZSCAN29Q8IWY8 852 aaPredicted RBP7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 FAM160A2Q8N612 972 aaPredicted RBP7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 MIGA1Q8NAN2 632 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 BRI3BPQ8WY22 251 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 DNAJC2Q99543 621 aaKnown RBP7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 NOL10Q9BSC4 688 aaKnown RBP7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 CFHR5Q9BXR6 569 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 BOLA2Q9H3K6 86 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 PRDM9Q9NQV7 894 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 PTPRFP10586 1907 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 MYH1P12882 1939 aa7.31□□□□□ -1.24
CTDSPL2-204ENST00000558966 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 FAM196BA6NMK8 535 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 INHBEP58166 350 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 TTF1Q15361 905 aaPredicted RBP7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 PTPRNQ16849 979 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 MAPKAPK5Q8IW41 473 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 TGFBRAP1Q8WUH2 860 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 UCN2Q96RP3 112 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 HAUS7Q99871 368 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 PPP1R12CQ9BZL4 782 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 FKBPLQ9UIM3 349 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 FLT1P17948 1338 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 ATAD5Q96QE3 1844 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 NAV1Q8NEY1 1877 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 CCL15-CCL14A0A0B4J2E2 113 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 TCRBV5S4A2TA0A5A2 114 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 TLL1O43897 1013 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 ALDH1A1P00352 501 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 FBXO45P0C2W1 286 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 PDE6AP16499 860 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 GTF2A2P52657 109 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 PPATQ06203 517 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 SEMA3FQ13275 785 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 PPIL2Q13356 520 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 CCL15Q16663 113 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 SLC9C2Q5TAH2 1124 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 TSHZ3Q63HK5 1081 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 TMED8Q6PL24 325 aaPredicted RBP7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 PNMA1Q8ND90 353 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 SPSB2Q99619 263 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 RIOK1Q9BRS2 568 aaKnown RBP7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 PAG1Q9NWQ8 432 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 KCNH4Q9UQ05 1017 aa7.3□□□□□ -1.24
CTDSPL2-204ENST00000558966 PALM3A6NDB9 673 aaPredicted RBP7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 GPR25O00155 361 aa7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 CHGBP05060 677 aa7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 NR1H3Q13133 447 aa7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 CRHR2Q13324 411 aa7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 SNAPC2Q13487 334 aa7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 RRP1BQ14684 758 aaKnown RBP7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 SLFNL1Q499Z3 407 aa7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 NOM1Q5C9Z4 860 aaKnown RBP7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 SCYL3Q8IZE3 742 aa7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 FAM43AQ8N2R8 423 aa7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 OTUD7AQ8TE49 926 aaPredicted RBP7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 ZNF296Q8WUU4 475 aaPredicted RBP7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 DNAJC18Q9H819 358 aa7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 ECHDC1Q9NTX5 307 aa7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 TFIP11Q9UBB9 837 aaKnown RBP7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 ZNF532Q9HCE3 1301 aa7.29□□□□□ -1.24
CTDSPL2-204ENST00000558966 CTNND1O60716 968 aaKnown RBP7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 PTPRAP18433 802 aa7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 ADD2P35612 726 aa7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 HDAC1Q13547 482 aaPredicted RBP7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 MOGSQ13724 837 aa7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 CCDC84Q86UT8 332 aaPredicted RBP7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 METTL16Q86W50 562 aaKnown RBP7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 CERS3Q8IU89 383 aa7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 EXOC6Q8TAG9 804 aa7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 SALL3Q9BXA9 1300 aa7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 MCOLN1Q9GZU1 580 aa7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 DHX36Q9H2U1 1008 aaKnown RBP7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 SAP30BPQ9UHR5 308 aaKnown RBP7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 PALD1Q9ULE6 856 aa7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 MAGEB6P1A0A0J9YX57 407 aa7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 BTBD19C9JJ37 291 aa7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 DXOO77932 396 aaKnown RBP7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 CETPP11597 493 aa7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 SOX11P35716 441 aa7.28□□□□□ -1.24
CTDSPL2-204ENST00000558966 DGKZQ13574 1117 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms