RNA–Protein interactions for RNA: ENST00000558903.1

CHRNA3-203, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-203ENST00000558903 CAP2P40123 477 aa6.94□□□□□ -1.3
CHRNA3-203ENST00000558903 CTCFP49711 727 aaPredicted RBP6.94□□□□□ -1.3
CHRNA3-203ENST00000558903 PRSS12P56730 875 aa6.94□□□□□ -1.3
CHRNA3-203ENST00000558903 PABPC4Q13310 644 aaKnown RBP eCLIP6.94□□□□□ -1.3
CHRNA3-203ENST00000558903 TAF1CQ15572 869 aaPredicted RBP6.94□□□□□ -1.3
CHRNA3-203ENST00000558903 IFNL3Q8IZI9 196 aa6.94□□□□□ -1.3
CHRNA3-203ENST00000558903 ZNF444Q8N0Y2 327 aaPredicted RBP6.94□□□□□ -1.3
CHRNA3-203ENST00000558903 JMYQ8N9B5 988 aa6.94□□□□□ -1.3
CHRNA3-203ENST00000558903 TTC13Q8NBP0 860 aa6.94□□□□□ -1.3
CHRNA3-203ENST00000558903 KHSRPQ92945 711 aaKnown RBP eCLIP6.94□□□□□ -1.3
CHRNA3-203ENST00000558903 GINM1Q9NU53 330 aa6.94□□□□□ -1.3
CHRNA3-203ENST00000558903 ZNF112Q9UJU3 913 aa6.94□□□□□ -1.3
CHRNA3-203ENST00000558903 ZBTB21Q9ULJ3 1066 aa6.94□□□□□ -1.3
CHRNA3-203ENST00000558903 ZHX2Q9Y6X8 837 aa6.94□□□□□ -1.3
CHRNA3-203ENST00000558903 COL11A1P12107 1806 aaPredicted RBP6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 PARP14Q460N5 1801 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 CYP2D7A0A087X1C5 515 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 GSG1L2A8MUP6 293 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 GH2P01242 217 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 TSPY3P0CV98 308 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 TSPY8P0CW00 308 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 GSPT1P15170 499 aaKnown RBP6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 PTPRAP18433 802 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 PLCD1P51178 756 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 PPARAQ07869 468 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 ZYXQ15942 572 aaKnown RBP6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 RRP12Q5JTH9 1297 aaKnown RBP6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 C12orf60Q5U649 245 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 TMEM179Q6ZVK1 233 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 FASTKD5Q7L8L6 764 aaKnown RBP6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 PARP9Q8IXQ6 854 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 ZNF280CQ8ND82 737 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 SMCR8Q8TEV9 937 aaPredicted RBP6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 DYNLL2Q96FJ2 89 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 ZFYVE28Q9HCC9 887 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 CWC22Q9HCG8 908 aaKnown RBP6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 SAGE1Q9NXZ1 904 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 CTNNA3Q9UI47 895 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 TSKSQ9UJT2 592 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 PNMA3Q9UL41 463 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 ROBO3Q96MS0 1386 aa6.93□□□□□ -1.3
CHRNA3-203ENST00000558903 PLXNB2O15031 1838 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 TSPY2A6NKD2 308 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 PHF20L1A8MW92 1017 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 CXCL11O14625 94 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 ZNF213O14771 459 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 FOXN1O15353 648 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 RANBP6O60518 1105 aaKnown RBP6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 CDC45O75419 566 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 SLURP2P0DP57 97 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 CDK8P49336 464 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 USP14P54578 494 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 HAND2P61296 217 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 IRX3P78415 501 aaPredicted RBP6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 ICA1Q05084 483 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 SPP2Q13103 211 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 MTMR2Q13614 643 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 KIF22Q14807 665 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 IMMTQ16891 758 aaKnown RBP6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 SBK1Q52WX2 424 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 BMP2KLQ5H9B9 411 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 LHX8Q68G74 356 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 TATDN1Q6P1N9 297 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 CTR9Q6PD62 1173 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 C16orf86Q6ZW13 317 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 CCDC84Q86UT8 332 aaPredicted RBP6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 SLC44A5Q8NCS7 719 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 CCDC17Q96LX7 622 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 PARK7Q99497 189 aaKnown RBP6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 RNF41Q9H4P4 317 aaPredicted RBP6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 DNAJC18Q9H819 358 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 EPB41L4AQ9HCS5 686 aaPredicted RBP6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 WBP1LQ9NX94 342 aa6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.92□□□□□ -1.3
CHRNA3-203ENST00000558903 RBBP6Q7Z6E9 1792 aaKnown RBP6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 C19orf81C9J6K1 198 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 USP17L10C9JJH3 530 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 PDHXO00330 501 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 PRDM1O75626 825 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 TBC1D8O95759 1140 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 HSPD1P10809 573 aaKnown RBP6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 CHMLP26374 656 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 SHMT1P34896 483 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 GJA5P36382 358 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 TM4SF4P48230 202 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 LBX1P52954 281 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 HMGCS2P54868 508 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 MAP3K10Q02779 954 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 CTDSPL2Q05D32 466 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 TRDNQ13061 729 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 SEPT2Q15019 361 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 ARHGEF6Q15052 776 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 VPS53Q5VIR6 699 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 USP17L2Q6R6M4 530 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 PADI6Q6TGC4 694 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 MFSD6Q6ZSS7 791 aa6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 RALYLQ86SE5 291 aaKnown RBP6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 METTL3Q86U44 580 aaKnown RBP6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 ZNF589Q86UQ0 364 aaPredicted RBP6.91□□□□□ -1.3
CHRNA3-203ENST00000558903 CCAR1Q8IX12 1150 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms