RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 COL6A1P12109 1028 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 MAPK4P31152 587 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 CDK8P49336 464 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 USP14P54578 494 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 IRX3P78415 501 aaPredicted RBP6.7□□□□□ -1.34
SMAD3-209ENST00000558894 CACNB2Q08289 660 aaPredicted RBP6.7□□□□□ -1.34
SMAD3-209ENST00000558894 TSHZ3Q63HK5 1081 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 CTR9Q6PD62 1173 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 C16orf86Q6ZW13 317 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 PI4K2BQ8TCG2 481 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 OTUD7AQ8TE49 926 aaPredicted RBP6.7□□□□□ -1.34
SMAD3-209ENST00000558894 OSBP2Q969R2 916 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 GCC1Q96CN9 775 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 PAWRQ96IZ0 340 aaKnown RBP6.7□□□□□ -1.34
SMAD3-209ENST00000558894 STRBPQ96SI9 672 aaKnown RBP6.7□□□□□ -1.34
SMAD3-209ENST00000558894 CHMP4BQ9H444 224 aaKnown RBP6.7□□□□□ -1.34
SMAD3-209ENST00000558894 RPAP3Q9H6T3 665 aaPredicted RBP6.7□□□□□ -1.34
SMAD3-209ENST00000558894 ATP8A2Q9NTI2 1148 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 ECHDC1Q9NTX5 307 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 BIN2Q9UBW5 565 aaPredicted RBP6.7□□□□□ -1.34
SMAD3-209ENST00000558894 SWAP70Q9UH65 585 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 TAOK2Q9UL54 1235 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 OGDHLQ9ULD0 1010 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 ADAMTS5Q9UNA0 930 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 TMX2Q9Y320 296 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 ROBO3Q96MS0 1386 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 FOXP2O15409 715 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 TFRCP02786 760 aaKnown RBP6.69□□□□□ -1.34
SMAD3-209ENST00000558894 HOXC6P09630 235 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 PRKAR2AP13861 404 aaKnown RBP6.69□□□□□ -1.34
SMAD3-209ENST00000558894 CAPN2P17655 700 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 PTPREP23469 700 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 CCND3P30281 292 aaPredicted RBP6.69□□□□□ -1.34
SMAD3-209ENST00000558894 MAP2K5Q13163 448 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 GRB14Q14449 540 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 COG2Q14746 738 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 SBK1Q52WX2 424 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 TMEM179Q6ZVK1 233 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 PLEKHH3Q7Z736 793 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 KBTBD3Q8NAB2 608 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 ANKLE1Q8NAG6 615 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 TRPV1Q8NER1 839 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 NPLOC4Q8TAT6 608 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 GTF3C2Q8WUA4 911 aaPredicted RBP6.69□□□□□ -1.34
SMAD3-209ENST00000558894 SOCS4Q8WXH5 440 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 NUDT12Q9BQG2 462 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 PAGR1Q9BTK6 254 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 BCL11AQ9H165 835 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 EPB41L4AQ9HCS5 686 aaPredicted RBP6.69□□□□□ -1.34
SMAD3-209ENST00000558894 HMX1Q9NP08 348 aaPredicted RBP6.69□□□□□ -1.34
SMAD3-209ENST00000558894 CABP5Q9NP86 173 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 RBM27Q9P2N5 1060 aaKnown RBP6.69□□□□□ -1.34
SMAD3-209ENST00000558894 SLC4A4Q9Y6R1 1079 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 MCM3APO60318 1980 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 PFASO15067 1338 aa6.69□□□□□ -1.34
SMAD3-209ENST00000558894 LRRC37A2A6NM11 1700 aa6.68□□□□□ -1.34
SMAD3-209ENST00000558894 IGKV6D-41A0A0C4DH26 115 aa6.68□□□□□ -1.34
SMAD3-209ENST00000558894 SLC15A5A6NIM6 579 aa6.68□□□□□ -1.34
SMAD3-209ENST00000558894 M0R2C6 588 aa6.68□□□□□ -1.34
SMAD3-209ENST00000558894 RNF113AO15541 343 aaKnown RBP6.68□□□□□ -1.34
SMAD3-209ENST00000558894 EEF2P13639 858 aaKnown RBP6.68□□□□□ -1.34
SMAD3-209ENST00000558894 RASA1P20936 1047 aa6.68□□□□□ -1.34
SMAD3-209ENST00000558894 DSG3P32926 999 aa6.68□□□□□ -1.34
SMAD3-209ENST00000558894 RGS2P41220 211 aa6.68□□□□□ -1.34
SMAD3-209ENST00000558894 CHRDL2Q6WN34 429 aa6.68□□□□□ -1.34
SMAD3-209ENST00000558894 REPS2Q8NFH8 660 aa6.68□□□□□ -1.34
SMAD3-209ENST00000558894 DPF3Q92784 378 aa6.68□□□□□ -1.34
SMAD3-209ENST00000558894 SEC62Q99442 399 aaKnown RBP6.68□□□□□ -1.34
SMAD3-209ENST00000558894 FEZ1Q99689 392 aa6.68□□□□□ -1.34
SMAD3-209ENST00000558894 APBA2Q99767 749 aa6.68□□□□□ -1.34
SMAD3-209ENST00000558894 MOV10L1Q9BXT6 1211 aaKnown RBP6.68□□□□□ -1.34
SMAD3-209ENST00000558894 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.68□□□□□ -1.34
SMAD3-209ENST00000558894 VCPKMTQ9H867 229 aa6.68□□□□□ -1.34
SMAD3-209ENST00000558894 LAMA4Q16363 1823 aa6.68□□□□□ -1.34
SMAD3-209ENST00000558894 MPHOSPH10O00566 681 aaKnown RBP6.67□□□□□ -1.34
SMAD3-209ENST00000558894 COBLO75128 1261 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 RRP1P56182 461 aaKnown RBP6.67□□□□□ -1.34
SMAD3-209ENST00000558894 TMEM132BQ14DG7 1078 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 ZSCAN25Q6NSZ9 544 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 GIMAP6Q6P9H5 292 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 NECAB2Q7Z6G3 386 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 TRMT44Q8IYL2 757 aaKnown RBP6.67□□□□□ -1.34
SMAD3-209ENST00000558894 SPICE1Q8N0Z3 855 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 SHCBP1Q8NEM2 672 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 APPBP2Q92624 585 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 LPAR1Q92633 364 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 ATG4CQ96DT6 458 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 CCDC17Q96LX7 622 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 HTATIP2Q9BUP3 242 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 SPATC1LQ9H0A9 340 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 FBXO28Q9NVF7 368 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 HOXC10Q9NYD6 342 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 ARPP21Q9UBL0 812 aaPredicted RBP6.67□□□□□ -1.34
SMAD3-209ENST00000558894 TACC3Q9Y6A5 838 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 TTC41PQ6P2S7 1318 aa6.67□□□□□ -1.34
SMAD3-209ENST00000558894 SOX1O00570 391 aaPredicted RBP6.66□□□□□ -1.34
SMAD3-209ENST00000558894 WDR46O15213 610 aaKnown RBP6.66□□□□□ -1.34
SMAD3-209ENST00000558894 GPAA1O43292 621 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 EVI5O60447 810 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 ATXN8OSP0DMR3 200 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms