RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 USP17L18D6R9N7 530 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 USP17L22D6RA61 530 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 USP17L17D6RBQ6 530 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 USP17L19D6RCP7 530 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 USP17L20D6RJB6 530 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 TIMP1P01033 207 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 GH2P01242 217 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 MYOGP15173 224 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 TAL1P17542 331 aaPredicted RBP14.73□□□□□ -0.05
SMAD3-206ENST00000558739 USP17L24Q0WX57 530 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 SKIV2LQ15477 1246 aaKnown RBP14.73□□□□□ -0.05
SMAD3-206ENST00000558739 CCDC184Q52MB2 194 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 KRT40Q6A162 431 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 ZNF365Q70YC5 407 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 ANKRD33Q7Z3H0 272 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 ACER1Q8TDN7 264 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 FEZ1Q99689 392 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 MOV10L1Q9BXT6 1211 aaKnown RBP14.73□□□□□ -0.05
SMAD3-206ENST00000558739 CD320Q9NPF0 282 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 CEP126Q9P2H0 1117 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 PALD1Q9ULE6 856 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.73□□□□□ -0.05
SMAD3-206ENST00000558739 DMDP11532 3685 aa14.73□□□□□ -0.05
SMAD3-206ENST00000558739 FLT1P17948 1338 aa14.72□□□□□ -0.05
SMAD3-206ENST00000558739 MYO5AQ9Y4I1 1855 aaKnown RBP14.72□□□□□ -0.05
SMAD3-206ENST00000558739 GPR37L1O60883 481 aa14.72□□□□□ -0.05
SMAD3-206ENST00000558739 RABGGTBP53611 331 aa14.72□□□□□ -0.05
SMAD3-206ENST00000558739 TIMM10P62072 90 aa14.72□□□□□ -0.05
SMAD3-206ENST00000558739 SPTY2D1Q68D10 685 aaPredicted RBP14.72□□□□□ -0.05
SMAD3-206ENST00000558739 METTL16Q86W50 562 aaKnown RBP14.72□□□□□ -0.05
SMAD3-206ENST00000558739 C12orf42Q96LP6 360 aa14.72□□□□□ -0.05
SMAD3-206ENST00000558739 SAP30BPQ9UHR5 308 aaKnown RBP14.72□□□□□ -0.05
SMAD3-206ENST00000558739 RFXAPO00287 272 aa14.71□□□□□ -0.05
SMAD3-206ENST00000558739 ERC2O15083 957 aa14.71□□□□□ -0.05
SMAD3-206ENST00000558739 CIAO1O76071 339 aa14.71□□□□□ -0.05
SMAD3-206ENST00000558739 IRX5P78411 483 aaPredicted RBP14.71□□□□□ -0.05
SMAD3-206ENST00000558739 MFSD5Q6N075 450 aa14.71□□□□□ -0.05
SMAD3-206ENST00000558739 LBX2Q6XYB7 198 aa14.71□□□□□ -0.05
SMAD3-206ENST00000558739 ADGRA1Q86SQ6 560 aa14.71□□□□□ -0.05
SMAD3-206ENST00000558739 CRACR2BQ8N4Y2 399 aaPredicted RBP14.71□□□□□ -0.05
SMAD3-206ENST00000558739 TGFBRAP1Q8WUH2 860 aa14.71□□□□□ -0.05
SMAD3-206ENST00000558739 AATFQ9NY61 560 aaKnown RBP eCLIP14.71□□□□□ -0.05
SMAD3-206ENST00000558739 HMG20BQ9P0W2 317 aa14.71□□□□□ -0.05
SMAD3-206ENST00000558739 MSRAQ9UJ68 235 aa14.71□□□□□ -0.05
SMAD3-206ENST00000558739 CACNA1HO95180 2353 aa14.7□□□□□ -0.06
SMAD3-206ENST00000558739 MYADML2A6NDP7 307 aa14.7□□□□□ -0.06
SMAD3-206ENST00000558739 TLL1O43897 1013 aa14.7□□□□□ -0.06
SMAD3-206ENST00000558739 RARBP10826 455 aa14.7□□□□□ -0.06
SMAD3-206ENST00000558739 ERCC3P19447 782 aa14.7□□□□□ -0.06
SMAD3-206ENST00000558739 RAB30Q15771 203 aa14.7□□□□□ -0.06
SMAD3-206ENST00000558739 MAML3Q96JK9 1138 aa14.7□□□□□ -0.06
SMAD3-206ENST00000558739 PPP1R12CQ9BZL4 782 aa14.7□□□□□ -0.06
SMAD3-206ENST00000558739 TSPYL2Q9H2G4 693 aaPredicted RBP14.7□□□□□ -0.06
SMAD3-206ENST00000558739 RPAP3Q9H6T3 665 aaPredicted RBP14.7□□□□□ -0.06
SMAD3-206ENST00000558739 SLC28A3Q9HAS3 691 aa14.7□□□□□ -0.06
SMAD3-206ENST00000558739 RAI14Q9P0K7 980 aa14.7□□□□□ -0.06
SMAD3-206ENST00000558739 MYH1P12882 1939 aa14.69□□□□□ -0.06
SMAD3-206ENST00000558739 EPOPA6NHQ4 379 aa14.69□□□□□ -0.06
SMAD3-206ENST00000558739 DCDC2CA8MYV0 355 aa14.69□□□□□ -0.06
SMAD3-206ENST00000558739 ZBTB22O15209 634 aa14.69□□□□□ -0.06
SMAD3-206ENST00000558739 ADAMTS4O75173 837 aa14.69□□□□□ -0.06
SMAD3-206ENST00000558739 PPIGQ13427 754 aaKnown RBP eCLIP14.69□□□□□ -0.062e-7■■■□□ 15.8
SMAD3-206ENST00000558739 RNF180Q86T96 592 aa14.69□□□□□ -0.06
SMAD3-206ENST00000558739 CDCA7LQ96GN5 454 aa14.69□□□□□ -0.06
SMAD3-206ENST00000558739 XAGE2Q96GT9 111 aa14.69□□□□□ -0.06
SMAD3-206ENST00000558739 TOX2Q96NM4 488 aa14.69□□□□□ -0.06
SMAD3-206ENST00000558739 DHX36Q9H2U1 1008 aaKnown RBP14.69□□□□□ -0.06
SMAD3-206ENST00000558739 STARD7Q9NQZ5 370 aa14.69□□□□□ -0.06
SMAD3-206ENST00000558739 PARP14Q460N5 1801 aa14.69□□□□□ -0.06
SMAD3-206ENST00000558739 SYNRGQ9UMZ2 1314 aa14.68□□□□□ -0.06
SMAD3-206ENST00000558739 APBB1O00213 710 aa14.68□□□□□ -0.06
SMAD3-206ENST00000558739 ACLYP53396 1101 aa14.68□□□□□ -0.06
SMAD3-206ENST00000558739 NHLH1Q02575 133 aa14.68□□□□□ -0.06
SMAD3-206ENST00000558739 RAB3GAP1Q15042 981 aa14.68□□□□□ -0.06
SMAD3-206ENST00000558739 AAK1Q2M2I8 961 aa14.68□□□□□ -0.06
SMAD3-206ENST00000558739 PPP2R2DQ66LE6 453 aa14.68□□□□□ -0.06
SMAD3-206ENST00000558739 TRIM34Q9BYJ4 488 aa14.68□□□□□ -0.06
SMAD3-206ENST00000558739 SPATC1LQ9H0A9 340 aa14.68□□□□□ -0.06
SMAD3-206ENST00000558739 KIAA1683Q9H0B3 1180 aa14.68□□□□□ -0.06
SMAD3-206ENST00000558739 ROBO3Q96MS0 1386 aa14.68□□□□□ -0.06
SMAD3-206ENST00000558739 COL11A1P12107 1806 aaPredicted RBP14.68□□□□□ -0.06
SMAD3-206ENST00000558739 UMODL1Q5DID0 1318 aa14.67□□□□□ -0.06
SMAD3-206ENST00000558739 A0A1B0GUL7 405 aa14.67□□□□□ -0.06
SMAD3-206ENST00000558739 SMIM22K7EJ46 135 aa14.67□□□□□ -0.06
SMAD3-206ENST00000558739 PGK2P07205 417 aa14.67□□□□□ -0.06
SMAD3-206ENST00000558739 CYP2C18P33260 490 aa14.67□□□□□ -0.06
SMAD3-206ENST00000558739 IL15P40933 162 aaPredicted RBP14.67□□□□□ -0.06
SMAD3-206ENST00000558739 GSTO1P78417 241 aa14.67□□□□□ -0.06
SMAD3-206ENST00000558739 PSRC1Q6PGN9 363 aaPredicted RBP14.67□□□□□ -0.06
SMAD3-206ENST00000558739 SPATA5Q8NB90 893 aa14.67□□□□□ -0.06
SMAD3-206ENST00000558739 CERS4Q9HA82 394 aa14.67□□□□□ -0.06
SMAD3-206ENST00000558739 MTCH2Q9Y6C9 303 aa14.67□□□□□ -0.06
SMAD3-206ENST00000558739 DCHS1Q96JQ0 3298 aa14.67□□□□□ -0.06
SMAD3-206ENST00000558739 COL4A4P53420 1690 aaPredicted RBP14.67□□□□□ -0.06
SMAD3-206ENST00000558739 MAP4K4O95819 1239 aaPredicted RBP14.66□□□□□ -0.06
SMAD3-206ENST00000558739 KIAA1755Q5JYT7 1200 aa14.66□□□□□ -0.06
SMAD3-206ENST00000558739 OTOP2Q7RTS6 562 aa14.66□□□□□ -0.06
SMAD3-206ENST00000558739 HERVK_113Q902F9 699 aa14.66□□□□□ -0.06
SMAD3-206ENST00000558739 VPS13AQ96RL7 3174 aa14.66□□□□□ -0.06
SMAD3-206ENST00000558739 MCM3APO60318 1980 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms