RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 ROBO3Q96MS0 1386 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 A0A0D9SFI3 127 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 HAX1O00165 279 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 RASA1P20936 1047 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 HERVK_113P62684 666 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 ERICH6BQ5W0A0 696 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 CWC27Q6UX04 472 aaKnown RBP10.07□□□□□ -0.8
TPM1-213ENST00000558400 CCDC129Q6ZRS4 1044 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 SIAH1Q8IUQ4 282 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 ANKRD13CQ8N6S4 541 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 GPRC5AQ8NFJ5 357 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 COA7Q96BR5 231 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 VCPKMTQ9H867 229 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 GOPCQ9HD26 462 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 MORF4L1Q9UBU8 362 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 SRRDQ9UH36 339 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 CTNNA3Q9UI47 895 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 SYNPO2Q9UMS6 1093 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 COLQQ9Y215 455 aaPredicted RBP10.07□□□□□ -0.8
TPM1-213ENST00000558400 SZT2Q5T011 3432 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 ZMYM6O95789 1325 aa10.07□□□□□ -0.8
TPM1-213ENST00000558400 CDK5RAP2Q96SN8 1893 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 MYH7P12883 1935 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 A0A1W2PRG0 241 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 POTEFA5A3E0 1075 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 SMIM22K7EJ46 135 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 FGRP09769 529 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 TSPY3P0CV98 308 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 TSPY8P0CW00 308 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 EEF2P13639 858 aaKnown RBP10.06□□□□□ -0.8
TPM1-213ENST00000558400 PRKAR2AP13861 404 aaKnown RBP10.06□□□□□ -0.8
TPM1-213ENST00000558400 VCAM1P19320 739 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 CCNA1P78396 465 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 ATP2B2Q01814 1243 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 ZYXQ15942 572 aaKnown RBP10.06□□□□□ -0.8
TPM1-213ENST00000558400 LBX2Q6XYB7 198 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 CCAR1Q8IX12 1150 aaKnown RBP10.06□□□□□ -0.8
TPM1-213ENST00000558400 SLC17A8Q8NDX2 589 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 NEDD1Q8NHV4 660 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 MKL1Q969V6 931 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 CCDC136Q96JN2 1154 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 TRIM47Q96LD4 638 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 DSCC1Q9BVC3 393 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 RNF41Q9H4P4 317 aaPredicted RBP10.06□□□□□ -0.8
TPM1-213ENST00000558400 RABGAP1Q9Y3P9 1069 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 HTTP42858 3142 aa10.06□□□□□ -0.8
TPM1-213ENST00000558400 ZNF213O14771 459 aa10.05□□□□□ -0.8
TPM1-213ENST00000558400 TNPO2O14787 897 aaKnown RBP10.05□□□□□ -0.8
TPM1-213ENST00000558400 WDR46O15213 610 aaKnown RBP10.05□□□□□ -0.8
TPM1-213ENST00000558400 ORC4O43929 436 aa10.05□□□□□ -0.8
TPM1-213ENST00000558400 TTLL1O95922 423 aa10.05□□□□□ -0.8
TPM1-213ENST00000558400 MAPK4P31152 587 aa10.05□□□□□ -0.8
TPM1-213ENST00000558400 TFAP4Q01664 338 aa10.05□□□□□ -0.8
TPM1-213ENST00000558400 VPS53Q5VIR6 699 aa10.05□□□□□ -0.8
TPM1-213ENST00000558400 STK11IPQ8N1F8 1099 aa10.05□□□□□ -0.8
TPM1-213ENST00000558400 MB21D1Q8N884 522 aa10.05□□□□□ -0.8
TPM1-213ENST00000558400 RAET1EQ8TD07 263 aa10.05□□□□□ -0.8
TPM1-213ENST00000558400 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.05□□□□□ -0.8
TPM1-213ENST00000558400 RPAP3Q9H6T3 665 aaPredicted RBP10.05□□□□□ -0.8
TPM1-213ENST00000558400 MTMR4Q9NYA4 1195 aa10.05□□□□□ -0.8
TPM1-213ENST00000558400 RBPJLQ9UBG7 517 aa10.05□□□□□ -0.8
TPM1-213ENST00000558400 CLIP2Q9UDT6 1046 aa10.05□□□□□ -0.8
TPM1-213ENST00000558400 SIPA1L1O43166 1804 aa10.05□□□□□ -0.8
TPM1-213ENST00000558400 MYPNQ86TC9 1320 aa10.05□□□□□ -0.8
TPM1-213ENST00000558400 TSPY2A6NKD2 308 aa10.04□□□□□ -0.8
TPM1-213ENST00000558400 F5H6K3 240 aa10.04□□□□□ -0.8
TPM1-213ENST00000558400 FOXP2O15409 715 aa10.04□□□□□ -0.8
TPM1-213ENST00000558400 PRDM1O75626 825 aa10.04□□□□□ -0.8
TPM1-213ENST00000558400 GSPT1P15170 499 aaKnown RBP10.04□□□□□ -0.8
TPM1-213ENST00000558400 KLRC3Q07444 240 aa10.04□□□□□ -0.8
TPM1-213ENST00000558400 SLC9C1Q4G0N8 1177 aa10.04□□□□□ -0.8
TPM1-213ENST00000558400 MFSD6Q6ZSS7 791 aa10.04□□□□□ -0.8
TPM1-213ENST00000558400 ZNF589Q86UQ0 364 aaPredicted RBP10.04□□□□□ -0.8
TPM1-213ENST00000558400 ARMC5Q96C12 935 aa10.04□□□□□ -0.8
TPM1-213ENST00000558400 TANGO6Q9C0B7 1094 aa10.04□□□□□ -0.8
TPM1-213ENST00000558400 ARHGAP39Q9C0H5 1083 aa10.04□□□□□ -0.8
TPM1-213ENST00000558400 RAD50Q92878 1312 aa10.04□□□□□ -0.8
TPM1-213ENST00000558400 BRCA2P51587 3418 aa10.04□□□□□ -0.8
TPM1-213ENST00000558400 PHIPQ8WWQ0 1821 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 IGKV6D-41A0A0C4DH26 115 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 RANBP6O60518 1105 aaKnown RBP10.03□□□□□ -0.8
TPM1-213ENST00000558400 FLOT1O75955 427 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 CAPN2P17655 700 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 CHMLP26374 656 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 ERVK-9P63128 1117 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 ERVK-24P63145 666 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 CTDSPL2Q05D32 466 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 IRF5Q13568 498 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 IMMTQ16891 758 aaKnown RBP10.03□□□□□ -0.8
TPM1-213ENST00000558400 CCDC178Q5BJE1 867 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 AKNAD1Q5T1N1 836 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 PXYLP1Q8TE99 480 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 CEP95Q96GE4 821 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 TTC14Q96N46 770 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 TMEM106CQ9BVX2 250 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 TOMM22Q9NS69 142 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 TCP11L1Q9NUJ3 509 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.03□□□□□ -0.8
TPM1-213ENST00000558400 PTCH2Q9Y6C5 1203 aa10.03□□□□□ -0.8
TPM1-213ENST00000558400 CENPFP49454 3210 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms