RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CLEC10AQ8IUN9 316 aa12.2□□□□□ -0.46
TPM1-212ENST00000558347 SLAIN1Q8ND83 568 aa12.2□□□□□ -0.46
TPM1-212ENST00000558347 GBP4Q96PP9 640 aa12.2□□□□□ -0.46
TPM1-212ENST00000558347 RBPJLQ9UBG7 517 aa12.2□□□□□ -0.46
TPM1-212ENST00000558347 PDE4DIPQ5VU43 2346 aa12.19□□□□□ -0.46
TPM1-212ENST00000558347 HIP1O00291 1037 aa12.19□□□□□ -0.46
TPM1-212ENST00000558347 GPAA1O43292 621 aa12.19□□□□□ -0.46
TPM1-212ENST00000558347 ADCY3O60266 1144 aa12.19□□□□□ -0.46
TPM1-212ENST00000558347 ZFYP08048 801 aaPredicted RBP12.19□□□□□ -0.46
TPM1-212ENST00000558347 Q3C1V9 767 aa12.19□□□□□ -0.46
TPM1-212ENST00000558347 CATSPERGQ6ZRH7 1159 aa12.19□□□□□ -0.46
TPM1-212ENST00000558347 TMEM179Q6ZVK1 233 aa12.19□□□□□ -0.46
TPM1-212ENST00000558347 C16orf86Q6ZW13 317 aa12.19□□□□□ -0.46
TPM1-212ENST00000558347 SIAH1Q8IUQ4 282 aa12.19□□□□□ -0.46
TPM1-212ENST00000558347 COA7Q96BR5 231 aa12.19□□□□□ -0.46
TPM1-212ENST00000558347 SEC62Q99442 399 aaKnown RBP12.19□□□□□ -0.46
TPM1-212ENST00000558347 EPB41L4AQ9HCS5 686 aaPredicted RBP12.19□□□□□ -0.46
TPM1-212ENST00000558347 ARPP21Q9UBL0 812 aaPredicted RBP12.19□□□□□ -0.46
TPM1-212ENST00000558347 USP17L15C9J2P7 530 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 USP17L13C9JLJ4 530 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 USP17L11C9JVI0 530 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 USP17L18D6R9N7 530 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 USP17L22D6RA61 530 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 USP17L17D6RBQ6 530 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 USP17L19D6RCP7 530 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 USP17L20D6RJB6 530 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 TRAK2O60296 914 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 CNMDO75829 334 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 CCL5P13501 91 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 ERVK-9P63128 1117 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 ERVK-24P63145 666 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 USP17L24Q0WX57 530 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 IRF5Q13568 498 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 SKOR2Q2VWA4 1001 aaPredicted RBP12.18□□□□□ -0.46
TPM1-212ENST00000558347 KIAA1755Q5JYT7 1200 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 AMOTL1Q8IY63 956 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 GPRC5AQ8NFJ5 357 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 PXYLP1Q8TE99 480 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 PAGR1Q9BTK6 254 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 FSD1Q9BTV5 496 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 RPAP3Q9H6T3 665 aaPredicted RBP12.18□□□□□ -0.46
TPM1-212ENST00000558347 BIN2Q9UBW5 565 aaPredicted RBP12.18□□□□□ -0.46
TPM1-212ENST00000558347 GJD2Q9UKL4 321 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 TAOK2Q9UL54 1235 aa12.18□□□□□ -0.46
TPM1-212ENST00000558347 INHAP05111 366 aa12.17□□□□□ -0.46
TPM1-212ENST00000558347 UBXN2AP68543 259 aa12.17□□□□□ -0.46
TPM1-212ENST00000558347 SBK1Q52WX2 424 aa12.17□□□□□ -0.46
TPM1-212ENST00000558347 CLEC17AQ6ZS10 378 aa12.17□□□□□ -0.46
TPM1-212ENST00000558347 SHISA4Q96DD7 197 aa12.17□□□□□ -0.46
TPM1-212ENST00000558347 ESYT1Q9BSJ8 1104 aa12.17□□□□□ -0.46
TPM1-212ENST00000558347 UNC93B1Q9H1C4 597 aa12.17□□□□□ -0.46
TPM1-212ENST00000558347 PORCNQ9H237 461 aa12.17□□□□□ -0.46
TPM1-212ENST00000558347 RLFQ13129 1914 aa12.17□□□□□ -0.46
TPM1-212ENST00000558347 GREB1LQ9C091 1923 aaPredicted RBP12.17□□□□□ -0.46
TPM1-212ENST00000558347 GOLGA6L3A6NEY3 463 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 SPDYE16A6NNV3 312 aaPredicted RBP12.16□□□□□ -0.46
TPM1-212ENST00000558347 EPB41L2O43491 1005 aaKnown RBP12.16□□□□□ -0.46
TPM1-212ENST00000558347 ICA1Q05084 483 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 GIMAP6Q6P9H5 292 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 STK11IPQ8N1F8 1099 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 SPRYD3Q8NCJ5 442 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 GTF3C2Q8WUA4 911 aaPredicted RBP12.16□□□□□ -0.46
TPM1-212ENST00000558347 RUFY2Q8WXA3 655 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 CCDC17Q96LX7 622 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 RNF208Q9H0X6 261 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 MINDY4BA8MYZ0 360 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 PATL2C9JE40 543 aaKnown RBP12.16□□□□□ -0.46
TPM1-212ENST00000558347 REC8O95072 547 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 GNAT2P19087 354 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 LRRFIP1Q32MZ4 808 aaKnown RBP12.16□□□□□ -0.46
TPM1-212ENST00000558347 ZMYM1Q5SVZ6 1142 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 LBX2Q6XYB7 198 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 IFNL3Q8IZI9 196 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.16□□□□□ -0.46
TPM1-212ENST00000558347 DIAPH3Q9NSV4 1193 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 BTBD7Q9P203 1132 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 TMX2Q9Y320 296 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 RABGAP1Q9Y3P9 1069 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 RAD50Q92878 1312 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 ROBO3Q96MS0 1386 aa12.16□□□□□ -0.46
TPM1-212ENST00000558347 PARP14Q460N5 1801 aa12.15□□□□□ -0.46
TPM1-212ENST00000558347 A0A0G2JMZ2 1700 aa12.15□□□□□ -0.46
TPM1-212ENST00000558347 SGSM2O43147 1006 aa12.15□□□□□ -0.46
TPM1-212ENST00000558347 GJB1P08034 283 aa12.15□□□□□ -0.46
TPM1-212ENST00000558347 EEF2P13639 858 aaKnown RBP12.15□□□□□ -0.46
TPM1-212ENST00000558347 CYP2B6P20813 491 aa12.15□□□□□ -0.46
TPM1-212ENST00000558347 RASA1P20936 1047 aa12.15□□□□□ -0.46
TPM1-212ENST00000558347 MAPK4P31152 587 aa12.15□□□□□ -0.46
TPM1-212ENST00000558347 TDO2P48775 406 aa12.15□□□□□ -0.46
TPM1-212ENST00000558347 TRIM32Q13049 653 aa12.15□□□□□ -0.46
TPM1-212ENST00000558347 PRPF38BQ5VTL8 546 aaKnown RBP12.15□□□□□ -0.46
TPM1-212ENST00000558347 GPR142Q7Z601 462 aa12.15□□□□□ -0.46
TPM1-212ENST00000558347 SPICE1Q8N0Z3 855 aa12.15□□□□□ -0.46
TPM1-212ENST00000558347 TNPO1Q92973 898 aaKnown RBP12.15□□□□□ -0.46
TPM1-212ENST00000558347 USP26Q9BXU7 913 aa12.15□□□□□ -0.46
TPM1-212ENST00000558347 VCPKMTQ9H867 229 aa12.15□□□□□ -0.46
TPM1-212ENST00000558347 ARHGEF10LQ9HCE6 1279 aa12.15□□□□□ -0.46
TPM1-212ENST00000558347 FOXP2O15409 715 aa12.14□□□□□ -0.47
TPM1-212ENST00000558347 APPP05067 770 aa12.14□□□□□ -0.47
TPM1-212ENST00000558347 HSP90AA1P07900 732 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms