RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 FAM160A1Q05DH4 1040 aa5.75□□□□□ -1.49
LRRC28-205ENST00000558248 MLECQ14165 292 aa5.75□□□□□ -1.49
LRRC28-205ENST00000558248 MRPL58Q14197 206 aaKnown RBP5.75□□□□□ -1.49
LRRC28-205ENST00000558248 ANGEL2Q5VTE6 544 aaKnown RBP5.75□□□□□ -1.49
LRRC28-205ENST00000558248 MFSD4AQ8N468 514 aa5.75□□□□□ -1.49
LRRC28-205ENST00000558248 XAGE3Q8WTP9 111 aa5.75□□□□□ -1.49
LRRC28-205ENST00000558248 PSMD1Q99460 953 aa5.75□□□□□ -1.49
LRRC28-205ENST00000558248 KBTBD4Q9NVX7 518 aa5.75□□□□□ -1.49
LRRC28-205ENST00000558248 GGT7Q9UJ14 662 aa5.75□□□□□ -1.49
LRRC28-205ENST00000558248 STRCQ7RTU9 1775 aa5.75□□□□□ -1.49
LRRC28-205ENST00000558248 DISP1Q96F81 1524 aa5.74□□□□□ -1.49
LRRC28-205ENST00000558248 KRTAP9-6A0A140TA67 174 aa5.74□□□□□ -1.49
LRRC28-205ENST00000558248 MPP2Q14168 576 aa5.74□□□□□ -1.49
LRRC28-205ENST00000558248 CWF19L2Q2TBE0 894 aaKnown RBP5.74□□□□□ -1.49
LRRC28-205ENST00000558248 ERMP1Q7Z2K6 904 aa5.74□□□□□ -1.49
LRRC28-205ENST00000558248 MCATQ8IVS2 390 aaKnown RBP5.74□□□□□ -1.49
LRRC28-205ENST00000558248 DPH2Q9BQC3 489 aaPredicted RBP5.74□□□□□ -1.49
LRRC28-205ENST00000558248 TNKS2Q9H2K2 1166 aa5.74□□□□□ -1.49
LRRC28-205ENST00000558248 TJP2Q9UDY2 1190 aa5.74□□□□□ -1.49
LRRC28-205ENST00000558248 ADGRE2Q9UHX3 823 aa5.74□□□□□ -1.49
LRRC28-205ENST00000558248 SUPT16HQ9Y5B9 1047 aaKnown RBP5.74□□□□□ -1.49
LRRC28-205ENST00000558248 LTBP4Q8N2S1 1624 aa5.74□□□□□ -1.49
LRRC28-205ENST00000558248 PHLDB1Q86UU1 1377 aa5.73□□□□□ -1.49
LRRC28-205ENST00000558248 FAM221AA4D161 298 aa5.73□□□□□ -1.49
LRRC28-205ENST00000558248 TAL1P17542 331 aaPredicted RBP5.73□□□□□ -1.49
LRRC28-205ENST00000558248 HSPA1LP34931 641 aa5.73□□□□□ -1.49
LRRC28-205ENST00000558248 KIR3DL1P43629 444 aa5.73□□□□□ -1.49
LRRC28-205ENST00000558248 CHMP4BP1P59074 171 aa5.73□□□□□ -1.49
LRRC28-205ENST00000558248 BNIP3Q12983 259 aa5.73□□□□□ -1.49
LRRC28-205ENST00000558248 IKZF1Q13422 519 aa5.73□□□□□ -1.49
LRRC28-205ENST00000558248 NAALADL2Q58DX5 795 aa5.73□□□□□ -1.49
LRRC28-205ENST00000558248 ZNF574Q6ZN55 896 aaPredicted RBP5.73□□□□□ -1.49
LRRC28-205ENST00000558248 C22orf34Q6ZV56 151 aa5.73□□□□□ -1.49
LRRC28-205ENST00000558248 FAM214BQ7L5A3 538 aa5.73□□□□□ -1.49
LRRC28-205ENST00000558248 SPACA3Q8IXA5 215 aa5.73□□□□□ -1.49
LRRC28-205ENST00000558248 TMEM87AQ8NBN3 555 aa5.73□□□□□ -1.49
LRRC28-205ENST00000558248 FAM13CQ8NE31 585 aa5.73□□□□□ -1.49
LRRC28-205ENST00000558248 PLAGL2Q9UPG8 496 aa5.73□□□□□ -1.49
LRRC28-205ENST00000558248 U3KQE9 123 aa5.73□□□□□ -1.49
LRRC28-205ENST00000558248 ROBO2Q9HCK4 1378 aa5.72□□□□□ -1.49
LRRC28-205ENST00000558248 BIN1O00499 593 aa5.72□□□□□ -1.49
LRRC28-205ENST00000558248 ZNF865P0CJ78 1059 aaPredicted RBP5.72□□□□□ -1.49
LRRC28-205ENST00000558248 CD8BP10966 210 aa5.72□□□□□ -1.49
LRRC28-205ENST00000558248 FUT4P22083 530 aa5.72□□□□□ -1.49
LRRC28-205ENST00000558248 EIF4A3P38919 411 aaKnown RBP5.72□□□□□ -1.49
LRRC28-205ENST00000558248 TMEM201Q5SNT2 666 aa5.72□□□□□ -1.49
LRRC28-205ENST00000558248 NFXL1Q6ZNB6 911 aa5.72□□□□□ -1.49
LRRC28-205ENST00000558248 FAM196AQ6ZSG2 479 aa5.72□□□□□ -1.49
LRRC28-205ENST00000558248 NOL8Q76FK4 1167 aaKnown RBP5.72□□□□□ -1.49
LRRC28-205ENST00000558248 REC114Q7Z4M0 266 aa5.72□□□□□ -1.49
LRRC28-205ENST00000558248 SPRED2Q7Z698 418 aa5.72□□□□□ -1.49
LRRC28-205ENST00000558248 CERS3Q8IU89 383 aa5.72□□□□□ -1.49
LRRC28-205ENST00000558248 PI4K2BQ8TCG2 481 aa5.72□□□□□ -1.49
LRRC28-205ENST00000558248 CYB5D2Q8WUJ1 264 aa5.72□□□□□ -1.49
LRRC28-205ENST00000558248 ACSF2Q96CM8 615 aaPredicted RBP5.72□□□□□ -1.49
LRRC28-205ENST00000558248 PPP1R1BQ9UD71 204 aaPredicted RBP5.72□□□□□ -1.49
LRRC28-205ENST00000558248 PTPRTO14522 1441 aa5.72□□□□□ -1.49
LRRC28-205ENST00000558248 CARMIL1Q5VZK9 1371 aa5.71□□□□□ -1.5
LRRC28-205ENST00000558248 CBX7O95931 251 aa5.71□□□□□ -1.5
LRRC28-205ENST00000558248 ZNF76P36508 570 aa5.71□□□□□ -1.5
LRRC28-205ENST00000558248 TNNI2P48788 182 aa5.71□□□□□ -1.5
LRRC28-205ENST00000558248 NKPD1Q17RQ9 610 aa5.71□□□□□ -1.5
LRRC28-205ENST00000558248 ZNF792Q3KQV3 632 aa5.71□□□□□ -1.5
LRRC28-205ENST00000558248 COPRSQ9NQ92 184 aa5.71□□□□□ -1.5
LRRC28-205ENST00000558248 BCCIPQ9P287 314 aaKnown RBP eCLIP5.71□□□□□ -1.5
LRRC28-205ENST00000558248 REV1Q9UBZ9 1251 aa5.71□□□□□ -1.5
LRRC28-205ENST00000558248 KLHL3Q9UH77 587 aa5.71□□□□□ -1.5
LRRC28-205ENST00000558248 CORINQ9Y5Q5 1042 aa5.71□□□□□ -1.5
LRRC28-205ENST00000558248 MED1Q15648 1581 aaPredicted RBP5.71□□□□□ -1.5
LRRC28-205ENST00000558248 IQSEC2Q5JU85 1478 aa5.71□□□□□ -1.5
LRRC28-205ENST00000558248 GRIN3BO60391 1043 aa5.7□□□□□ -1.5
LRRC28-205ENST00000558248 HTR3BO95264 441 aa5.7□□□□□ -1.5
LRRC28-205ENST00000558248 RECKO95980 971 aa5.7□□□□□ -1.5
LRRC28-205ENST00000558248 JUNBP17275 347 aaPredicted RBP5.7□□□□□ -1.5
LRRC28-205ENST00000558248 CDKAL1Q5VV42 579 aa5.7□□□□□ -1.5
LRRC28-205ENST00000558248 CDH24Q86UP0 819 aa5.7□□□□□ -1.5
LRRC28-205ENST00000558248 SLFN12Q8IYM2 578 aa5.7□□□□□ -1.5
LRRC28-205ENST00000558248 PHACTR4Q8IZ21 702 aa5.7□□□□□ -1.5
LRRC28-205ENST00000558248 RIN3Q8TB24 985 aa5.7□□□□□ -1.5
LRRC28-205ENST00000558248 CAPN6Q9Y6Q1 641 aa5.7□□□□□ -1.5
LRRC28-205ENST00000558248 POGZQ7Z3K3 1410 aa5.7□□□□□ -1.5
LRRC28-205ENST00000558248 IQGAP2Q13576 1575 aa5.7□□□□□ -1.5
LRRC28-205ENST00000558248 PITPNM2Q9BZ72 1349 aa5.7□□□□□ -1.5
LRRC28-205ENST00000558248 PRR36Q9H6K5 1346 aa5.7□□□□□ -1.5
LRRC28-205ENST00000558248 FRMPD1Q5SYB0 1578 aa5.69□□□□□ -1.5
LRRC28-205ENST00000558248 TLR3O15455 904 aaKnown RBP5.69□□□□□ -1.5
LRRC28-205ENST00000558248 CD96P40200 585 aa5.69□□□□□ -1.5
LRRC28-205ENST00000558248 ZP2Q05996 745 aa5.69□□□□□ -1.5
LRRC28-205ENST00000558248 APOBRQ0VD83 1088 aa5.69□□□□□ -1.5
LRRC28-205ENST00000558248 FBXL19Q6PCT2 694 aa5.69□□□□□ -1.5
LRRC28-205ENST00000558248 SLC23A3Q6PIS1 610 aa5.69□□□□□ -1.5
LRRC28-205ENST00000558248 CBLL1Q75N03 491 aa5.69□□□□□ -1.5
LRRC28-205ENST00000558248 THAP5Q7Z6K1 395 aa5.69□□□□□ -1.5
LRRC28-205ENST00000558248 PIWIL2Q8TC59 973 aaKnown RBP5.69□□□□□ -1.5
LRRC28-205ENST00000558248 ZNF296Q8WUU4 475 aaPredicted RBP5.69□□□□□ -1.5
LRRC28-205ENST00000558248 ASIC4Q96FT7 647 aa5.69□□□□□ -1.5
LRRC28-205ENST00000558248 HSPA12BQ96MM6 686 aa5.69□□□□□ -1.5
LRRC28-205ENST00000558248 LRRC3Q9BY71 257 aa5.69□□□□□ -1.5
LRRC28-205ENST00000558248 RC3H2Q9HBD1 1191 aaKnown RBP5.69□□□□□ -1.5
LRRC28-205ENST00000558248 KCNQ5Q9NR82 932 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms