RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 DIAPH3Q9NSV4 1193 aa8.51□□□□□ -1.05
MARK3-212ENST00000558223 FAM13BQ9NYF5 915 aa8.51□□□□□ -1.05
MARK3-212ENST00000558223 SIPA1L3O60292 1781 aaPredicted RBP8.5□□□□□ -1.05
MARK3-212ENST00000558223 A6NHS1 94 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 J3QL48 77 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 ERVH48-1M5A8F1 160 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 ZKSCAN1P17029 563 aaPredicted RBP8.5□□□□□ -1.05
MARK3-212ENST00000558223 IRS1P35568 1242 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 GNALP38405 381 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 HSPA2P54652 639 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 TRIM28Q13263 835 aaKnown RBP8.5□□□□□ -1.05
MARK3-212ENST00000558223 CUL4AQ13619 759 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 TCEA2Q15560 299 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 CHRNA2Q15822 529 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 BRDTQ58F21 947 aaPredicted RBP8.5□□□□□ -1.05
MARK3-212ENST00000558223 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 C11orf96Q7Z7L8 435 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 CCDC191Q8NCU4 936 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 ZSCAN31Q96LW9 406 aaPredicted RBP8.5□□□□□ -1.05
MARK3-212ENST00000558223 SRRTQ9BXP5 876 aaKnown RBP8.5□□□□□ -1.05
MARK3-212ENST00000558223 IL1RAPL2Q9NP60 686 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 GMPR2Q9P2T1 348 aaKnown RBP8.5□□□□□ -1.05
MARK3-212ENST00000558223 ATP8A1Q9Y2Q0 1164 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 MSRB2Q9Y3D2 182 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 SCN11AQ9UI33 1791 aa8.5□□□□□ -1.05
MARK3-212ENST00000558223 PKD1L3Q7Z443 1732 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 PARP4Q9UKK3 1724 aaKnown RBP8.49□□□□□ -1.05
MARK3-212ENST00000558223 SMAD7O15105 426 aaKnown RBP8.49□□□□□ -1.05
MARK3-212ENST00000558223 AXIN1O15169 862 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 PDPK1O15530 556 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 STARD3NLO95772 234 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 KRT18P05783 430 aaKnown RBP8.49□□□□□ -1.05
MARK3-212ENST00000558223 IGKV5-2P06315 115 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 PSMA5P28066 241 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 SMCPP49901 116 aaPredicted RBP8.49□□□□□ -1.05
MARK3-212ENST00000558223 NEK4P51957 841 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 SMTNP53814 917 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 AIMP1Q12904 312 aaKnown RBP8.49□□□□□ -1.05
MARK3-212ENST00000558223 SQSTM1Q13501 440 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 HSP90AB3PQ58FF7 597 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 PPP4R4Q6NUP7 873 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 NXPE4Q6UWF7 544 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 RAVER1Q8IY67 606 aaKnown RBP8.49□□□□□ -1.05
MARK3-212ENST00000558223 TRMT44Q8IYL2 757 aaKnown RBP8.49□□□□□ -1.05
MARK3-212ENST00000558223 ZNF511Q8NB15 262 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 ZNF296Q8WUU4 475 aaPredicted RBP8.49□□□□□ -1.05
MARK3-212ENST00000558223 TNPO1Q92973 898 aaKnown RBP8.49□□□□□ -1.05
MARK3-212ENST00000558223 SUCLG2Q96I99 432 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 APBA2Q99767 749 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 MYD88Q99836 296 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 C1QTNF2Q9BXJ5 285 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 USP16Q9Y5T5 823 aa8.49□□□□□ -1.05
MARK3-212ENST00000558223 COL5A2P05997 1499 aaPredicted RBP8.49□□□□□ -1.05
MARK3-212ENST00000558223 H7C1W4 665 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 MYL6BP14649 208 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 WNT7BP56706 349 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 SLC39A6Q13433 755 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 KRT32Q14532 448 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 BRD3Q15059 726 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 ANKRD1Q15327 319 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 RTN1Q16799 776 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 CTC1Q2NKJ3 1217 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 PROSER3Q2NL68 480 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 CWF19L2Q2TBE0 894 aaKnown RBP8.48□□□□□ -1.05
MARK3-212ENST00000558223 TKFCQ3LXA3 575 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 USPL1Q5W0Q7 1092 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 AACSQ86V21 672 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 JAMLQ86YT9 394 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 MPHOSPH6Q99547 160 aaKnown RBP8.48□□□□□ -1.05
MARK3-212ENST00000558223 NT5C1AQ9BXI3 368 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 BICC1Q9H694 974 aaKnown RBP8.48□□□□□ -1.05
MARK3-212ENST00000558223 ST7Q9NRC1 585 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 SH2B1Q9NRF2 756 aaPredicted RBP8.48□□□□□ -1.05
MARK3-212ENST00000558223 GNL3LQ9NVN8 582 aaKnown RBP8.48□□□□□ -1.05
MARK3-212ENST00000558223 CWC25Q9NXE8 425 aaPredicted RBP8.48□□□□□ -1.05
MARK3-212ENST00000558223 KLK14Q9P0G3 267 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 HMG20BQ9P0W2 317 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 LEMD3Q9Y2U8 911 aa8.48□□□□□ -1.05
MARK3-212ENST00000558223 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.48□□□□□ -1.05
MARK3-212ENST00000558223 A0A087WZG4 1122 aa8.47□□□□□ -1.05
MARK3-212ENST00000558223 SERTM1A2A2V5 107 aa8.47□□□□□ -1.05
MARK3-212ENST00000558223 GOLGA6L3A6NEY3 463 aa8.47□□□□□ -1.05
MARK3-212ENST00000558223 GADD45BO75293 160 aaPredicted RBP8.47□□□□□ -1.05
MARK3-212ENST00000558223 CIAO1O76071 339 aa8.47□□□□□ -1.05
MARK3-212ENST00000558223 ANXA1P04083 346 aa8.47□□□□□ -1.05
MARK3-212ENST00000558223 ATP5JP18859 108 aa8.47□□□□□ -1.05
MARK3-212ENST00000558223 IL15P40933 162 aaPredicted RBP8.47□□□□□ -1.05
MARK3-212ENST00000558223 CDKN1CP49918 316 aaPredicted RBP8.47□□□□□ -1.05
MARK3-212ENST00000558223 MRE11P49959 708 aa8.47□□□□□ -1.05
MARK3-212ENST00000558223 RASGRF1Q13972 1273 aa8.47□□□□□ -1.05
MARK3-212ENST00000558223 PPP2R5AQ15172 486 aa8.47□□□□□ -1.05
MARK3-212ENST00000558223 MTFR1Q15390 333 aa8.47□□□□□ -1.05
MARK3-212ENST00000558223 ZRSR2Q15696 482 aaKnown RBP8.47□□□□□ -1.05
MARK3-212ENST00000558223 TREML1Q86YW5 311 aa8.47□□□□□ -1.05
MARK3-212ENST00000558223 ALDH16A1Q8IZ83 802 aa8.47□□□□□ -1.05
MARK3-212ENST00000558223 NME8Q8N427 588 aa8.47□□□□□ -1.05
MARK3-212ENST00000558223 CELF2-AS1Q8N7Q2 184 aa8.47□□□□□ -1.05
MARK3-212ENST00000558223 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.47□□□□□ -1.05
MARK3-212ENST00000558223 TMEM74Q96NL1 305 aa8.47□□□□□ -1.05
MARK3-212ENST00000558223 PLCD4Q9BRC7 762 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms