RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 ZNF512BQ96KM6 892 aaPredicted RBP12.74□□□□□ -0.37
LYSMD2-203ENST00000558126 C12orf42Q96LP6 360 aa12.74□□□□□ -0.37
LYSMD2-203ENST00000558126 MSCO60682 206 aa12.73□□□□□ -0.37
LYSMD2-203ENST00000558126 SYN1P17600 705 aa12.73□□□□□ -0.37
LYSMD2-203ENST00000558126 COL9A1P20849 921 aa12.73□□□□□ -0.37
LYSMD2-203ENST00000558126 Q3C1V9 767 aa12.73□□□□□ -0.37
LYSMD2-203ENST00000558126 NAA16Q6N069 864 aaPredicted RBP12.73□□□□□ -0.37
LYSMD2-203ENST00000558126 USP17L2Q6R6M4 530 aa12.73□□□□□ -0.37
LYSMD2-203ENST00000558126 PI16Q6UXB8 463 aa12.73□□□□□ -0.37
LYSMD2-203ENST00000558126 ATF7IPQ6VMQ6 1270 aa12.73□□□□□ -0.37
LYSMD2-203ENST00000558126 APBA2Q99767 749 aa12.73□□□□□ -0.37
LYSMD2-203ENST00000558126 DNAJC18Q9H819 358 aa12.73□□□□□ -0.37
LYSMD2-203ENST00000558126 RABGAP1Q9Y3P9 1069 aa12.73□□□□□ -0.37
LYSMD2-203ENST00000558126 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.73□□□□□ -0.37
LYSMD2-203ENST00000558126 FLT1P17948 1338 aa12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 GLRX3O76003 335 aaKnown RBP12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 GNAI2P04899 355 aa12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 HOXC6P09630 235 aa12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 RARSP54136 660 aaKnown RBP12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 CCNA1P78396 465 aa12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 JAG1P78504 1218 aa12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 G3BP1Q13283 466 aaKnown RBP eCLIP12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 LBX2Q6XYB7 198 aa12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 Q7L0L9 218 aa12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 CCAR1Q8IX12 1150 aaKnown RBP12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 TGFBRAP1Q8WUH2 860 aa12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 TRIM34Q9BYJ4 488 aa12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 AATFQ9NY61 560 aaKnown RBP eCLIP12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 ZBTB21Q9ULJ3 1066 aa12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 ALPK3Q96L96 1907 aa12.72□□□□□ -0.37
LYSMD2-203ENST00000558126 IPO8O15397 1037 aaKnown RBP12.71□□□□□ -0.37
LYSMD2-203ENST00000558126 IGHA2P01877 340 aa12.71□□□□□ -0.37
LYSMD2-203ENST00000558126 HLA-DOAP06340 250 aa12.71□□□□□ -0.37
LYSMD2-203ENST00000558126 MAP2K5Q13163 448 aa12.71□□□□□ -0.37
LYSMD2-203ENST00000558126 LRRC26Q2I0M4 334 aa12.71□□□□□ -0.37
LYSMD2-203ENST00000558126 TATDN1Q6P1N9 297 aa12.71□□□□□ -0.37
LYSMD2-203ENST00000558126 EDC3Q96F86 508 aaKnown RBP12.71□□□□□ -0.37
LYSMD2-203ENST00000558126 PORCNQ9H237 461 aa12.71□□□□□ -0.37
LYSMD2-203ENST00000558126 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.37
LYSMD2-203ENST00000558126 SLC15A5A6NIM6 579 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 USP17L15C9J2P7 530 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 USP17L13C9JLJ4 530 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 USP17L11C9JVI0 530 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 USP17L18D6R9N7 530 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 USP17L22D6RA61 530 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 USP17L17D6RBQ6 530 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 USP17L19D6RCP7 530 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 USP17L20D6RJB6 530 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 CCND3P30281 292 aaPredicted RBP12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 USP14P54578 494 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 USP17L24Q0WX57 530 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 CCDC158Q5M9N0 1113 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 MFSD14CQ5VZR4 134 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 CRACR2BQ8N4Y2 399 aaPredicted RBP12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 LPAR1Q92633 364 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 EHD4Q9H223 541 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 RABGEF1Q9UJ41 708 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 PALD1Q9ULE6 856 aa12.7□□□□□ -0.38
LYSMD2-203ENST00000558126 GOLGA8CPA6NN73 597 aa12.69□□□□□ -0.38
LYSMD2-203ENST00000558126 CNMDO75829 334 aa12.69□□□□□ -0.38
LYSMD2-203ENST00000558126 CYP2E1P05181 493 aaPredicted RBP12.69□□□□□ -0.38
LYSMD2-203ENST00000558126 NBR1Q14596 966 aa12.69□□□□□ -0.38
LYSMD2-203ENST00000558126 CCL14Q16627 93 aa12.69□□□□□ -0.38
LYSMD2-203ENST00000558126 CATSPERGQ6ZRH7 1159 aa12.69□□□□□ -0.38
LYSMD2-203ENST00000558126 MAPKAPK5Q8IW41 473 aa12.69□□□□□ -0.38
LYSMD2-203ENST00000558126 KIAA1683Q9H0B3 1180 aa12.69□□□□□ -0.38
LYSMD2-203ENST00000558126 DDX20Q9UHI6 824 aaKnown RBP12.69□□□□□ -0.38
LYSMD2-203ENST00000558126 PLXNB2O15031 1838 aa12.69□□□□□ -0.38
LYSMD2-203ENST00000558126 PNMA6EA0A0J9YXQ4 647 aa12.68□□□□□ -0.38
LYSMD2-203ENST00000558126 DNM1LO00429 736 aa12.68□□□□□ -0.38
LYSMD2-203ENST00000558126 PEX10O60683 326 aa12.68□□□□□ -0.38
LYSMD2-203ENST00000558126 GDF11O95390 407 aa12.68□□□□□ -0.38
LYSMD2-203ENST00000558126 GRB14Q14449 540 aa12.68□□□□□ -0.38
LYSMD2-203ENST00000558126 PROX2Q3B8N5 592 aa12.68□□□□□ -0.38
LYSMD2-203ENST00000558126 TNNI3KQ59H18 835 aa12.68□□□□□ -0.38
LYSMD2-203ENST00000558126 TTC39AQ5SRH9 613 aa12.68□□□□□ -0.38
LYSMD2-203ENST00000558126 ADGRA1Q86SQ6 560 aa12.68□□□□□ -0.38
LYSMD2-203ENST00000558126 LBHD1Q9BQE6 289 aaPredicted RBP12.68□□□□□ -0.38
LYSMD2-203ENST00000558126 FPGT-TNNI3KV9GXZ4 949 aa12.68□□□□□ -0.38
LYSMD2-203ENST00000558126 GH2P01242 217 aa12.67□□□□□ -0.38
LYSMD2-203ENST00000558126 PTPN5P54829 565 aa12.67□□□□□ -0.38
LYSMD2-203ENST00000558126 THSD4Q6ZMP0 1018 aa12.67□□□□□ -0.38
LYSMD2-203ENST00000558126 SSH3Q8TE77 659 aa12.67□□□□□ -0.38
LYSMD2-203ENST00000558126 PAGR1Q9BTK6 254 aa12.67□□□□□ -0.38
LYSMD2-203ENST00000558126 SENP6Q9GZR1 1112 aaPredicted RBP12.67□□□□□ -0.38
LYSMD2-203ENST00000558126 SERPINB13Q9UIV8 391 aa12.67□□□□□ -0.38
LYSMD2-203ENST00000558126 DDX60LQ5H9U9 1706 aaKnown RBP12.67□□□□□ -0.38
LYSMD2-203ENST00000558126 STRNO43815 780 aa12.66□□□□□ -0.38
LYSMD2-203ENST00000558126 TRIM27P14373 513 aa12.66□□□□□ -0.38
LYSMD2-203ENST00000558126 MDM2Q00987 491 aaPredicted RBP12.66□□□□□ -0.38
LYSMD2-203ENST00000558126 ATP2B2Q01814 1243 aa12.66□□□□□ -0.38
LYSMD2-203ENST00000558126 SHROOM1Q2M3G4 852 aaPredicted RBP12.66□□□□□ -0.38
LYSMD2-203ENST00000558126 C1orf53Q5VUE5 145 aa12.66□□□□□ -0.38
LYSMD2-203ENST00000558126 OLFML2BQ68BL8 750 aa12.66□□□□□ -0.38
LYSMD2-203ENST00000558126 TTC6Q86TZ1 520 aa12.66□□□□□ -0.38
LYSMD2-203ENST00000558126 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.66□□□□□ -0.38
LYSMD2-203ENST00000558126 ARRDC4Q8NCT1 418 aa12.66□□□□□ -0.38
LYSMD2-203ENST00000558126 GUCD1Q96NT3 240 aa12.66□□□□□ -0.38
LYSMD2-203ENST00000558126 DBNDD2Q9BQY9 259 aa12.66□□□□□ -0.38
LYSMD2-203ENST00000558126 COL25A1Q9BXS0 654 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms