RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 INPP5BP32019 993 aa19.65■□□□□ 0.74
SNX1-203ENST00000558040 GNAQP50148 359 aa19.65■□□□□ 0.74
SNX1-203ENST00000558040 GRM4Q14833 912 aa19.65■□□□□ 0.74
SNX1-203ENST00000558040 KIF3AQ9Y496 699 aa19.65■□□□□ 0.74
SNX1-203ENST00000558040 USP2O75604 605 aaPredicted RBP19.64■□□□□ 0.73
SNX1-203ENST00000558040 CDC27P30260 824 aa19.64■□□□□ 0.73
SNX1-203ENST00000558040 NOL9Q5SY16 702 aaKnown RBP19.64■□□□□ 0.73
SNX1-203ENST00000558040 NSUN7Q8NE18 718 aaKnown RBP19.64■□□□□ 0.73
SNX1-203ENST00000558040 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.64■□□□□ 0.738e-11■□□□□ 8.9
SNX1-203ENST00000558040 MYH4Q9Y623 1939 aa19.64■□□□□ 0.73
SNX1-203ENST00000558040 PTPDC1A2A3K4 754 aa19.63■□□□□ 0.73
SNX1-203ENST00000558040 USP17L5A8MUK1 530 aa19.63■□□□□ 0.73
SNX1-203ENST00000558040 PARP1P09874 1014 aaKnown RBP19.63■□□□□ 0.73
SNX1-203ENST00000558040 ADD1P35611 737 aaKnown RBP19.63■□□□□ 0.73
SNX1-203ENST00000558040 PRKG1Q13976 671 aa19.63■□□□□ 0.73
SNX1-203ENST00000558040 TTLL12Q14166 644 aaPredicted RBP19.63■□□□□ 0.73
SNX1-203ENST00000558040 DLK2Q6UY11 383 aa19.63■□□□□ 0.73
SNX1-203ENST00000558040 ARMC9Q7Z3E5 817 aa19.63■□□□□ 0.73
SNX1-203ENST00000558040 GMCL1P1Q8NEA9 526 aa19.63■□□□□ 0.73
SNX1-203ENST00000558040 SMARCC2Q8TAQ2 1214 aa19.63■□□□□ 0.73
SNX1-203ENST00000558040 LZTS2Q9BRK4 669 aa19.63■□□□□ 0.73
SNX1-203ENST00000558040 AS3MTQ9HBK9 375 aa19.63■□□□□ 0.73
SNX1-203ENST00000558040 GPBP1L1Q9HC44 474 aaPredicted RBP19.63■□□□□ 0.73
SNX1-203ENST00000558040 GOPCQ9HD26 462 aa19.63■□□□□ 0.73
SNX1-203ENST00000558040 FAM217BQ9NTX9 383 aaPredicted RBP19.63■□□□□ 0.73
SNX1-203ENST00000558040 MTMR7Q9Y216 660 aa19.63■□□□□ 0.73
SNX1-203ENST00000558040 CTDNEP1O95476 244 aa19.62■□□□□ 0.73
SNX1-203ENST00000558040 PDHBP11177 359 aa19.62■□□□□ 0.73
SNX1-203ENST00000558040 IFNAR1P17181 557 aa19.62■□□□□ 0.73
SNX1-203ENST00000558040 GJB2P29033 226 aa19.62■□□□□ 0.73
SNX1-203ENST00000558040 MAP3K9P80192 1104 aa19.62■□□□□ 0.73
SNX1-203ENST00000558040 ASPRV1Q53RT3 343 aa19.62■□□□□ 0.73
SNX1-203ENST00000558040 SIAH1Q8IUQ4 282 aa19.62■□□□□ 0.73
SNX1-203ENST00000558040 DCAF4Q8WV16 495 aa19.62■□□□□ 0.73
SNX1-203ENST00000558040 CIZ1Q9ULV3 898 aaPredicted RBP19.62■□□□□ 0.73
SNX1-203ENST00000558040 TMX2Q9Y320 296 aa19.62■□□□□ 0.73
SNX1-203ENST00000558040 CSADQ9Y600 493 aa19.62■□□□□ 0.73
SNX1-203ENST00000558040 SNHG28P0DPA3 235 aa19.61■□□□□ 0.73
SNX1-203ENST00000558040 MAP3K11Q16584 847 aa19.61■□□□□ 0.73
SNX1-203ENST00000558040 CHADLQ6NUI6 762 aa19.61■□□□□ 0.73
SNX1-203ENST00000558040 TMTC3Q6ZXV5 915 aa19.61■□□□□ 0.73
SNX1-203ENST00000558040 TRIM22Q8IYM9 498 aa19.61■□□□□ 0.73
SNX1-203ENST00000558040 FAM184AQ8NB25 1140 aa19.61■□□□□ 0.73
SNX1-203ENST00000558040 ZKSCAN4Q969J2 545 aaPredicted RBP19.61■□□□□ 0.73
SNX1-203ENST00000558040 FEZ1Q99689 392 aa19.61■□□□□ 0.73
SNX1-203ENST00000558040 FZD1Q9UP38 647 aa19.61■□□□□ 0.73
SNX1-203ENST00000558040 STK36Q9NRP7 1315 aa19.6■□□□□ 0.73
SNX1-203ENST00000558040 PALM3A6NDB9 673 aaPredicted RBP19.6■□□□□ 0.73
SNX1-203ENST00000558040 RAD21O60216 631 aa19.6■□□□□ 0.73
SNX1-203ENST00000558040 JAK2O60674 1132 aa19.6■□□□□ 0.73
SNX1-203ENST00000558040 PDIA4P13667 645 aaKnown RBP19.6■□□□□ 0.73
SNX1-203ENST00000558040 PTPRAP18433 802 aa19.6■□□□□ 0.73
SNX1-203ENST00000558040 PDCP20941 246 aa19.6■□□□□ 0.73
SNX1-203ENST00000558040 SSRP1Q08945 709 aaKnown RBP19.6■□□□□ 0.73
SNX1-203ENST00000558040 NTRK3Q16288 839 aa19.6■□□□□ 0.73
SNX1-203ENST00000558040 GPATCH4Q5T3I0 446 aaKnown RBP19.6■□□□□ 0.73
SNX1-203ENST00000558040 SLFN13Q68D06 897 aa19.6■□□□□ 0.73
SNX1-203ENST00000558040 ANKRD13AQ8IZ07 590 aa19.6■□□□□ 0.73
SNX1-203ENST00000558040 GMCL1Q96IK5 515 aa19.6■□□□□ 0.73
SNX1-203ENST00000558040 MAD2L2Q9UI95 211 aa19.6■□□□□ 0.73
SNX1-203ENST00000558040 A0A1W2PRG0 241 aa19.59■□□□□ 0.73
SNX1-203ENST00000558040 F5H6K3 240 aa19.59■□□□□ 0.73
SNX1-203ENST00000558040 TRAF5O00463 557 aa19.59■□□□□ 0.73
SNX1-203ENST00000558040 DDIT3P35638 169 aa19.59■□□□□ 0.73
SNX1-203ENST00000558040 ECE1P42892 770 aa19.59■□□□□ 0.73
SNX1-203ENST00000558040 SLC1A4P43007 532 aa19.59■□□□□ 0.73
SNX1-203ENST00000558040 FKBP1BP68106 108 aa19.59■□□□□ 0.73
SNX1-203ENST00000558040 AKAP17AQ02040 695 aaKnown RBP19.59■□□□□ 0.73
SNX1-203ENST00000558040 KLRC3Q07444 240 aa19.59■□□□□ 0.73
SNX1-203ENST00000558040 VGLL4Q14135 290 aa19.59■□□□□ 0.73
SNX1-203ENST00000558040 CCDC96Q2M329 555 aa19.59■□□□□ 0.73
SNX1-203ENST00000558040 USP17L2Q6R6M4 530 aa19.59■□□□□ 0.73
SNX1-203ENST00000558040 ACER1Q8TDN7 264 aa19.59■□□□□ 0.73
SNX1-203ENST00000558040 WASF1Q92558 559 aa19.59■□□□□ 0.73
SNX1-203ENST00000558040 DDX11Q96FC9 970 aa19.59■□□□□ 0.73
SNX1-203ENST00000558040 WDR18Q9BV38 432 aa19.59■□□□□ 0.73
SNX1-203ENST00000558040 RBM27Q9P2N5 1060 aaKnown RBP19.59■□□□□ 0.73
SNX1-203ENST00000558040 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.59■□□□□ 0.73
SNX1-203ENST00000558040 ORC3Q9UBD5 711 aaPredicted RBP19.59■□□□□ 0.73
SNX1-203ENST00000558040 PAPPA2Q9BXP8 1791 aa19.58■□□□□ 0.73
SNX1-203ENST00000558040 UNCXA6NJT0 531 aa19.58■□□□□ 0.72
SNX1-203ENST00000558040 KLRF2D3W0D1 207 aa19.58■□□□□ 0.72
SNX1-203ENST00000558040 PLEKHA8P1O95397 391 aa19.58■□□□□ 0.72
SNX1-203ENST00000558040 FMNL1O95466 1100 aaPredicted RBP19.58■□□□□ 0.72
SNX1-203ENST00000558040 NDUFB10O96000 172 aa19.58■□□□□ 0.72
SNX1-203ENST00000558040 SMARCA1P28370 1054 aa19.58■□□□□ 0.72
SNX1-203ENST00000558040 ZNF543Q08ER8 600 aa19.58■□□□□ 0.72
SNX1-203ENST00000558040 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.58■□□□□ 0.72
SNX1-203ENST00000558040 SLC26A6Q9BXS9 759 aa19.58■□□□□ 0.72
SNX1-203ENST00000558040 RNF26Q9BY78 433 aaPredicted RBP19.58■□□□□ 0.72
SNX1-203ENST00000558040 KIAA1683Q9H0B3 1180 aa19.58■□□□□ 0.72
SNX1-203ENST00000558040 VCPKMTQ9H867 229 aa19.58■□□□□ 0.72
SNX1-203ENST00000558040 ZNF408Q9H9D4 720 aa19.58■□□□□ 0.72
SNX1-203ENST00000558040 CHMP5Q9NZZ3 219 aa19.58■□□□□ 0.72
SNX1-203ENST00000558040 USP17L10C9JJH3 530 aa19.57■□□□□ 0.72
SNX1-203ENST00000558040 USP14P54578 494 aa19.57■□□□□ 0.72
SNX1-203ENST00000558040 CCDC84Q86UT8 332 aaPredicted RBP19.57■□□□□ 0.72
SNX1-203ENST00000558040 STAG2Q8N3U4 1231 aa19.57■□□□□ 0.72
SNX1-203ENST00000558040 SRBD1Q8N5C6 995 aaKnown RBP19.57■□□□□ 0.72
SNX1-203ENST00000558040 ZNF280CQ8ND82 737 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms