RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CYFIP1Q7L576 1253 aa4.86□□□□□ -1.63
TDP1-217ENST00000557782 CRACR2BQ8N4Y2 399 aaPredicted RBP4.86□□□□□ -1.63
TDP1-217ENST00000557782 PI4K2BQ8TCG2 481 aa4.86□□□□□ -1.63
TDP1-217ENST00000557782 JPH3Q8WXH2 748 aaPredicted RBP4.86□□□□□ -1.63
TDP1-217ENST00000557782 SLC6A18Q96N87 628 aa4.86□□□□□ -1.63
TDP1-217ENST00000557782 HAUS7Q99871 368 aa4.86□□□□□ -1.63
TDP1-217ENST00000557782 SMG9Q9H0W8 520 aaKnown RBP4.86□□□□□ -1.63
TDP1-217ENST00000557782 SLC52A2Q9HAB3 445 aa4.86□□□□□ -1.63
TDP1-217ENST00000557782 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.86□□□□□ -1.63
TDP1-217ENST00000557782 SH2B1Q9NRF2 756 aaPredicted RBP4.86□□□□□ -1.63
TDP1-217ENST00000557782 FAM86C1Q9NVL1 165 aa4.86□□□□□ -1.63
TDP1-217ENST00000557782 PNMA2Q9UL42 364 aa4.86□□□□□ -1.63
TDP1-217ENST00000557782 SENP3-EIF4A1A0A087X0R7 540 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 FAM83GA6ND36 823 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 DCDC2CA8MYV0 355 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 SOX1O00570 391 aaPredicted RBP4.85□□□□□ -1.63
TDP1-217ENST00000557782 GABRDO14764 452 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 PPM1BO75688 479 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 ABLIM3O94929 683 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 TP53P04637 393 aaPredicted RBP4.85□□□□□ -1.63
TDP1-217ENST00000557782 EPHX1P07099 455 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 JMJD7P0C870 316 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 FGFR3P22607 806 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 POLR2BP30876 1174 aaKnown RBP4.85□□□□□ -1.63
TDP1-217ENST00000557782 SCNN1BP51168 640 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 PRR20EP86478 221 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 PRR20CP86479 221 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 PRR20DP86480 221 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 PRR20BP86481 221 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 PRR20AP86496 221 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 PICALMQ13492 652 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 MORC3Q14149 939 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 SART3Q15020 963 aaKnown RBP4.85□□□□□ -1.63
TDP1-217ENST00000557782 SEPT7Q16181 437 aaKnown RBP4.85□□□□□ -1.63
TDP1-217ENST00000557782 RGL3Q3MIN7 710 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 HP1BP3Q5SSJ5 553 aaPredicted RBP4.85□□□□□ -1.63
TDP1-217ENST00000557782 C10orf62Q5T681 223 aaPredicted RBP4.85□□□□□ -1.63
TDP1-217ENST00000557782 TDRD10Q5VZ19 366 aaKnown RBP4.85□□□□□ -1.63
TDP1-217ENST00000557782 FAM117BQ6P1L5 589 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 POMZP3Q6PJE2 187 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 PPFIBP1Q86W92 1011 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 GSTCDQ8NEC7 633 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 SLC7A14Q8TBB6 771 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 OSBP2Q969R2 916 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 ACSF2Q96CM8 615 aaPredicted RBP4.85□□□□□ -1.63
TDP1-217ENST00000557782 GMCL1Q96IK5 515 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 RHOBTB2Q9BYZ6 727 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 MTFR1LQ9H019 292 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 PICK1Q9NRD5 415 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 ENAMQ9NRM1 1142 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 OBP2AQ9NY56 170 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 DNMT3LQ9UJW3 386 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 TRIM33Q9UPN9 1127 aa4.85□□□□□ -1.63
TDP1-217ENST00000557782 TNKSO95271 1327 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 VSTM5A8MXK1 200 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 RGS13O14921 159 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 NPHP1O15259 732 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 PRPF3O43395 683 aaKnown RBP4.84□□□□□ -1.63
TDP1-217ENST00000557782 NRDCO43847 1150 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 CLEC3AO75596 197 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 F2P00734 622 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 C6orf222P0C671 652 aaPredicted RBP4.84□□□□□ -1.63
TDP1-217ENST00000557782 EPHA1P21709 976 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 CCND1P24385 295 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 GBP1P32455 592 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 DGKGP49619 791 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 POU5F1BQ06416 359 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 C19orf57Q0VDD7 668 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 RAPGEF1Q13905 1077 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 ZNF460Q14592 562 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 PTPN21Q16825 1174 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 GRAMD1BQ3KR37 738 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 MINDY4Q4G0A6 757 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 IFFO2Q5TF58 517 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 IQSEC1Q6DN90 963 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 MAMDC2Q7Z304 686 aaPredicted RBP4.84□□□□□ -1.63
TDP1-217ENST00000557782 FGD2Q7Z6J4 655 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 ADAT2Q7Z6V5 191 aaKnown RBP4.84□□□□□ -1.63
TDP1-217ENST00000557782 SYT9Q86SS6 491 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 ANKLE2Q86XL3 938 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 CCDC144CPQ8IYA2 1237 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 SLFN12Q8IYM2 578 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 TRIM22Q8IYM9 498 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 IFNL3Q8IZI9 196 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 BVESQ8NE79 360 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 PTPRN2Q92932 1015 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 E2F7Q96AV8 911 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 CCDC74BQ96LY2 380 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 MAGEB10Q96LZ2 347 aaPredicted RBP4.84□□□□□ -1.63
TDP1-217ENST00000557782 FGD4Q96M96 766 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 MENTQ9BUN1 341 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 TRIM8Q9BZR9 551 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 WNT10AQ9GZT5 417 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 KLHL25Q9H0H3 589 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 CCDC86Q9H6F5 360 aaKnown RBP4.84□□□□□ -1.63
TDP1-217ENST00000557782 FRRS1LQ9P0K9 344 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 SUSD2Q9UGT4 822 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 IP6K2Q9UHH9 426 aa4.84□□□□□ -1.63
TDP1-217ENST00000557782 LUC7L2Q9Y383 392 aaKnown RBP4.84□□□□□ -1.63
TDP1-217ENST00000557782 SPDYE3A6NKU9 549 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms