RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 CALML3P27482 149 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 GJB2P29033 226 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 CSPP1Q1MSJ5 1256 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 LARP1BQ659C4 914 aaKnown RBP12.19□□□□□ -0.46
GABRB3-213ENST00000557765 PPP1R18Q6NYC8 613 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 CHST3Q7LGC8 479 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 FAM160B2Q86V87 743 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 ANKRD13AQ8IZ07 590 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 SAMD3Q8N6K7 520 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 SLC44A5Q8NCS7 719 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 CCDC148Q8NFR7 591 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 CHURC1Q8WUH1 139 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 TCEANC2Q96MN5 208 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 GBP4Q96PP9 640 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 LRRC2Q9BYS8 371 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 CLIP2Q9UDT6 1046 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 CSADQ9Y600 493 aa12.19□□□□□ -0.46
GABRB3-213ENST00000557765 MYPNQ86TC9 1320 aa12.18□□□□□ -0.46
GABRB3-213ENST00000557765 PTPDC1A2A3K4 754 aa12.18□□□□□ -0.46
GABRB3-213ENST00000557765 GOLGA6L22H0YM25 854 aa12.18□□□□□ -0.46
GABRB3-213ENST00000557765 STX6O43752 255 aa12.18□□□□□ -0.46
GABRB3-213ENST00000557765 GH2P01242 217 aa12.18□□□□□ -0.46
GABRB3-213ENST00000557765 PDHBP11177 359 aa12.18□□□□□ -0.46
GABRB3-213ENST00000557765 MAP3K9P80192 1104 aa12.18□□□□□ -0.46
GABRB3-213ENST00000557765 RAB3GAP1Q15042 981 aa12.18□□□□□ -0.46
GABRB3-213ENST00000557765 SAFBQ15424 915 aaKnown RBP eCLIP12.18□□□□□ -0.46
GABRB3-213ENST00000557765 BTNL9Q6UXG8 535 aa12.18□□□□□ -0.46
GABRB3-213ENST00000557765 BRAPQ7Z569 592 aa12.18□□□□□ -0.46
GABRB3-213ENST00000557765 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.18□□□□□ -0.46
GABRB3-213ENST00000557765 C12orf42Q96LP6 360 aa12.18□□□□□ -0.46
GABRB3-213ENST00000557765 ZKSCAN3Q9BRR0 538 aa12.18□□□□□ -0.46
GABRB3-213ENST00000557765 BRMS1Q9HCU9 246 aa12.18□□□□□ -0.46
GABRB3-213ENST00000557765 NAP1L2Q9ULW6 460 aaPredicted RBP12.18□□□□□ -0.46
GABRB3-213ENST00000557765 USP17L10C9JJH3 530 aa12.17□□□□□ -0.46
GABRB3-213ENST00000557765 WDR46O15213 610 aaKnown RBP12.17□□□□□ -0.46
GABRB3-213ENST00000557765 BRD1O95696 1058 aa12.17□□□□□ -0.46
GABRB3-213ENST00000557765 EEF2P13639 858 aaKnown RBP12.17□□□□□ -0.46
GABRB3-213ENST00000557765 SLC1A4P43007 532 aa12.17□□□□□ -0.46
GABRB3-213ENST00000557765 PPATQ06203 517 aa12.17□□□□□ -0.46
GABRB3-213ENST00000557765 ZNF543Q08ER8 600 aa12.17□□□□□ -0.46
GABRB3-213ENST00000557765 FBXO18Q8NFZ0 1043 aa12.17□□□□□ -0.46
GABRB3-213ENST00000557765 BICD2Q8TD16 824 aa12.17□□□□□ -0.46
GABRB3-213ENST00000557765 NUP133Q8WUM0 1156 aa12.17□□□□□ -0.46
GABRB3-213ENST00000557765 RIOX1Q9H6W3 641 aa12.17□□□□□ -0.46
GABRB3-213ENST00000557765 VCPKMTQ9H867 229 aa12.17□□□□□ -0.46
GABRB3-213ENST00000557765 INCENPQ9NQS7 918 aa12.17□□□□□ -0.46
GABRB3-213ENST00000557765 ORC3Q9UBD5 711 aaPredicted RBP12.17□□□□□ -0.46
GABRB3-213ENST00000557765 SEC63Q9UGP8 760 aaKnown RBP12.17□□□□□ -0.46
GABRB3-213ENST00000557765 ESYT2A0FGR8 921 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 SHTN1A0MZ66 631 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 POTECB2RU33 542 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 KLRF2D3W0D1 207 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 F5H6K3 240 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 H3BQV1 296 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 CXCL11O14625 94 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 SYT1P21579 422 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 GNA11P29992 359 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 KLRC3Q07444 240 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 STK3Q13188 491 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 SEPT2Q15019 361 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 SH3D19Q5HYK7 790 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 NBPF12Q5TAG4 269 aaPredicted RBP12.16□□□□□ -0.46
GABRB3-213ENST00000557765 IFFO2Q5TF58 517 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 ERO1BQ86YB8 467 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 ZNF280CQ8ND82 737 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 RRP36Q96EU6 259 aaKnown RBP12.16□□□□□ -0.46
GABRB3-213ENST00000557765 WRNIP1Q96S55 665 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 FAM217BQ9NTX9 383 aaPredicted RBP12.16□□□□□ -0.46
GABRB3-213ENST00000557765 MAD2L2Q9UI95 211 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 FEM1BQ9UK73 627 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 DOCK1Q14185 1865 aa12.16□□□□□ -0.46
GABRB3-213ENST00000557765 LARGE1O95461 756 aa12.15□□□□□ -0.46
GABRB3-213ENST00000557765 ZSCAN22P10073 491 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-213ENST00000557765 BMP3P12645 472 aa12.15□□□□□ -0.46
GABRB3-213ENST00000557765 CDC27P30260 824 aa12.15□□□□□ -0.46
GABRB3-213ENST00000557765 GUCY1A2P33402 732 aa12.15□□□□□ -0.46
GABRB3-213ENST00000557765 ADD1P35611 737 aaKnown RBP12.15□□□□□ -0.46
GABRB3-213ENST00000557765 STAT2P52630 851 aa12.15□□□□□ -0.46
GABRB3-213ENST00000557765 BACE1P56817 501 aa12.15□□□□□ -0.46
GABRB3-213ENST00000557765 CCT2P78371 535 aaKnown RBP12.15□□□□□ -0.46
GABRB3-213ENST00000557765 FUT2Q10981 343 aa12.15□□□□□ -0.46
GABRB3-213ENST00000557765 PABPC4Q13310 644 aaKnown RBP eCLIP12.15□□□□□ -0.46
GABRB3-213ENST00000557765 PFKFB3Q16875 520 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-213ENST00000557765 SLFN13Q68D06 897 aa12.15□□□□□ -0.46
GABRB3-213ENST00000557765 USP17L2Q6R6M4 530 aa12.15□□□□□ -0.46
GABRB3-213ENST00000557765 NOL8Q76FK4 1167 aaKnown RBP12.15□□□□□ -0.46
GABRB3-213ENST00000557765 NBPF11Q86T75 865 aa12.15□□□□□ -0.46
GABRB3-213ENST00000557765 STK11IPQ8N1F8 1099 aa12.15□□□□□ -0.46
GABRB3-213ENST00000557765 NECAB1Q8N987 351 aa12.15□□□□□ -0.46
GABRB3-213ENST00000557765 PROCA1Q8NCQ7 364 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-213ENST00000557765 GTF3C2Q8WUA4 911 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-213ENST00000557765 CDCA5Q96FF9 252 aa12.15□□□□□ -0.46
GABRB3-213ENST00000557765 C8orf76Q96K31 380 aa12.15□□□□□ -0.46
GABRB3-213ENST00000557765 FOXP1Q9H334 677 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-213ENST00000557765 MAP3K20Q9NYL2 800 aaKnown RBP12.15□□□□□ -0.46
GABRB3-213ENST00000557765 MORC2Q9Y6X9 1032 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-213ENST00000557765 PAPPA2Q9BXP8 1791 aa12.15□□□□□ -0.46
GABRB3-213ENST00000557765 PNMA6FA0A0J9YX94 578 aa12.14□□□□□ -0.47
GABRB3-213ENST00000557765 NMT2O60551 498 aa12.14□□□□□ -0.47
GABRB3-213ENST00000557765 CTDNEP1O95476 244 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms