RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 PRKAB2O43741 272 aa19.28■□□□□ 0.68
SCFD1-224ENST00000557713 ATP5JP18859 108 aa19.28■□□□□ 0.68
SCFD1-224ENST00000557713 ADD2P35612 726 aa19.28■□□□□ 0.68
SCFD1-224ENST00000557713 ATP2B2Q01814 1243 aa19.28■□□□□ 0.68
SCFD1-224ENST00000557713 SLFNL1Q499Z3 407 aa19.28■□□□□ 0.68
SCFD1-224ENST00000557713 KIAA1755Q5JYT7 1200 aa19.28■□□□□ 0.68
SCFD1-224ENST00000557713 TMEM179Q6ZVK1 233 aa19.28■□□□□ 0.68
SCFD1-224ENST00000557713 SLC44A5Q8NCS7 719 aa19.28■□□□□ 0.68
SCFD1-224ENST00000557713 DYNLL2Q96FJ2 89 aa19.28■□□□□ 0.68
SCFD1-224ENST00000557713 MOV10L1Q9BXT6 1211 aaKnown RBP19.28■□□□□ 0.68
SCFD1-224ENST00000557713 PAG1Q9NWQ8 432 aa19.28■□□□□ 0.68
SCFD1-224ENST00000557713 LAMA3Q16787 3333 aa19.28■□□□□ 0.68
SCFD1-224ENST00000557713 STRNO43815 780 aa19.27■□□□□ 0.68
SCFD1-224ENST00000557713 GPR153Q6NV75 609 aa19.27■□□□□ 0.68
SCFD1-224ENST00000557713 BOLA2Q9H3K6 86 aa19.27■□□□□ 0.68
SCFD1-224ENST00000557713 ATP8A2Q9NTI2 1148 aa19.27■□□□□ 0.68
SCFD1-224ENST00000557713 DDX20Q9UHI6 824 aaKnown RBP19.27■□□□□ 0.68
SCFD1-224ENST00000557713 CYP2C19P33261 490 aa19.26■□□□□ 0.67
SCFD1-224ENST00000557713 LRIT3Q3SXY7 679 aa19.26■□□□□ 0.67
SCFD1-224ENST00000557713 SHCBP1Q8NEM2 672 aa19.26■□□□□ 0.67
SCFD1-224ENST00000557713 TRPV1Q8NER1 839 aa19.26■□□□□ 0.67
SCFD1-224ENST00000557713 HAUS7Q99871 368 aa19.26■□□□□ 0.67
SCFD1-224ENST00000557713 TANGO6Q9C0B7 1094 aa19.26■□□□□ 0.67
SCFD1-224ENST00000557713 SPATC1LQ9H0A9 340 aa19.26■□□□□ 0.67
SCFD1-224ENST00000557713 SMIM22K7EJ46 135 aa19.25■□□□□ 0.67
SCFD1-224ENST00000557713 MSCO60682 206 aa19.25■□□□□ 0.67
SCFD1-224ENST00000557713 MBD4O95243 580 aa19.25■□□□□ 0.67
SCFD1-224ENST00000557713 AKR1B1P15121 316 aa19.25■□□□□ 0.67
SCFD1-224ENST00000557713 CNGA1P29973 690 aa19.25■□□□□ 0.67
SCFD1-224ENST00000557713 DSG3P32926 999 aa19.25■□□□□ 0.67
SCFD1-224ENST00000557713 C12orf60Q5U649 245 aa19.25■□□□□ 0.67
SCFD1-224ENST00000557713 TDHQ8IZJ6 230 aa19.25■□□□□ 0.67
SCFD1-224ENST00000557713 LPAR1Q92633 364 aa19.25■□□□□ 0.67
SCFD1-224ENST00000557713 UBE2OQ9C0C9 1292 aaKnown RBP19.25■□□□□ 0.67
SCFD1-224ENST00000557713 BCL11AQ9H165 835 aa19.25■□□□□ 0.67
SCFD1-224ENST00000557713 TMX2Q9Y320 296 aa19.25■□□□□ 0.67
SCFD1-224ENST00000557713 RLFQ13129 1914 aa19.25■□□□□ 0.67
SCFD1-224ENST00000557713 CHGBP05060 677 aa19.24■□□□□ 0.67
SCFD1-224ENST00000557713 CYBAP13498 195 aa19.24■□□□□ 0.67
SCFD1-224ENST00000557713 ERCC3P19447 782 aa19.24■□□□□ 0.67
SCFD1-224ENST00000557713 ADORA2AP29274 412 aa19.24■□□□□ 0.67
SCFD1-224ENST00000557713 UBE3CQ15386 1083 aa19.24■□□□□ 0.67
SCFD1-224ENST00000557713 OLFML2BQ68BL8 750 aa19.24■□□□□ 0.67
SCFD1-224ENST00000557713 DPP9Q86TI2 863 aa19.24■□□□□ 0.67
SCFD1-224ENST00000557713 CLEC10AQ8IUN9 316 aa19.24■□□□□ 0.67
SCFD1-224ENST00000557713 MB21D1Q8N884 522 aa19.24■□□□□ 0.67
SCFD1-224ENST00000557713 SENP6Q9GZR1 1112 aaPredicted RBP19.24■□□□□ 0.67
SCFD1-224ENST00000557713 ARHGEF10LQ9HCE6 1279 aa19.24■□□□□ 0.67
SCFD1-224ENST00000557713 FRMPD3Q5JV73 1810 aa19.23■□□□□ 0.67
SCFD1-224ENST00000557713 A0A0G2JMZ2 1700 aa19.23■□□□□ 0.67
SCFD1-224ENST00000557713 CYP2D7A0A087X1C5 515 aa19.23■□□□□ 0.67
SCFD1-224ENST00000557713 CDK8P49336 464 aa19.23■□□□□ 0.67
SCFD1-224ENST00000557713 CCDC17Q96LX7 622 aa19.23■□□□□ 0.67
SCFD1-224ENST00000557713 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.23■□□□□ 0.67
SCFD1-224ENST00000557713 CHMP4BQ9H444 224 aaKnown RBP19.23■□□□□ 0.67
SCFD1-224ENST00000557713 VCPKMTQ9H867 229 aa19.23■□□□□ 0.67
SCFD1-224ENST00000557713 ZNF236Q9UL36 1845 aa19.23■□□□□ 0.67
SCFD1-224ENST00000557713 USP17L12C9JPN9 530 aa19.22■□□□□ 0.67
SCFD1-224ENST00000557713 USP17L21D6R901 530 aa19.22■□□□□ 0.67
SCFD1-224ENST00000557713 COBLO75128 1261 aa19.22■□□□□ 0.67
SCFD1-224ENST00000557713 ICA1Q05084 483 aa19.22■□□□□ 0.67
SCFD1-224ENST00000557713 C16orf86Q6ZW13 317 aa19.22■□□□□ 0.67
SCFD1-224ENST00000557713 ABRAQ8N0Z2 381 aa19.22■□□□□ 0.67
SCFD1-224ENST00000557713 SPICE1Q8N0Z3 855 aa19.22■□□□□ 0.67
SCFD1-224ENST00000557713 ATG4CQ96DT6 458 aa19.22■□□□□ 0.67
SCFD1-224ENST00000557713 MROH8Q9H579 483 aa19.22■□□□□ 0.67
SCFD1-224ENST00000557713 SH2D4AQ9H788 454 aa19.22■□□□□ 0.67
SCFD1-224ENST00000557713 DNM1LO00429 736 aa19.21■□□□□ 0.67
SCFD1-224ENST00000557713 FLOT1O75955 427 aa19.21■□□□□ 0.67
SCFD1-224ENST00000557713 ADAMTS5Q9UNA0 930 aa19.21■□□□□ 0.67
SCFD1-224ENST00000557713 WDR46O15213 610 aaKnown RBP19.2■□□□□ 0.66
SCFD1-224ENST00000557713 MDM2Q00987 491 aaPredicted RBP19.2■□□□□ 0.66
SCFD1-224ENST00000557713 PLS1Q14651 629 aa19.2■□□□□ 0.66
SCFD1-224ENST00000557713 CTR9Q6PD62 1173 aa19.2■□□□□ 0.66
SCFD1-224ENST00000557713 NCAPG2Q86XI2 1143 aa19.2■□□□□ 0.66
SCFD1-224ENST00000557713 PUS7LQ9H0K6 701 aaKnown RBP19.2■□□□□ 0.66
SCFD1-224ENST00000557713 SLC4A4Q9Y6R1 1079 aa19.2■□□□□ 0.66
SCFD1-224ENST00000557713 EEF2P13639 858 aaKnown RBP19.19■□□□□ 0.66
SCFD1-224ENST00000557713 ATN1P54259 1190 aaPredicted RBP19.19■□□□□ 0.66
SCFD1-224ENST00000557713 TMEM132BQ14DG7 1078 aa19.19■□□□□ 0.66
SCFD1-224ENST00000557713 GJC2Q5T442 439 aaPredicted RBP19.19■□□□□ 0.66
SCFD1-224ENST00000557713 ZSCAN25Q6NSZ9 544 aa19.19■□□□□ 0.66
SCFD1-224ENST00000557713 AMOTL1Q8IY63 956 aa19.19■□□□□ 0.66
SCFD1-224ENST00000557713 DEFB123Q8N688 67 aa19.19■□□□□ 0.66
SCFD1-224ENST00000557713 ARRDC4Q8NCT1 418 aa19.19■□□□□ 0.66
SCFD1-224ENST00000557713 SLC17A8Q8NDX2 589 aa19.19■□□□□ 0.66
SCFD1-224ENST00000557713 LRRCC1Q9C099 1032 aa19.19■□□□□ 0.66
SCFD1-224ENST00000557713 KANSL2Q9H9L4 492 aa19.19■□□□□ 0.66
SCFD1-224ENST00000557713 SLC5A4Q9NY91 659 aa19.19■□□□□ 0.66
SCFD1-224ENST00000557713 RCAN3Q9UKA8 241 aa19.19■□□□□ 0.66
SCFD1-224ENST00000557713 BAZ2AQ9UIF9 1905 aaKnown RBP19.19■□□□□ 0.66
SCFD1-224ENST00000557713 SEPT4O43236 478 aa19.18■□□□□ 0.66
SCFD1-224ENST00000557713 SMARCA5O60264 1052 aaPredicted RBP19.18■□□□□ 0.66
SCFD1-224ENST00000557713 PRAMEF19Q5SWL8 479 aa19.18■□□□□ 0.66
SCFD1-224ENST00000557713 Q7L0L9 218 aa19.18■□□□□ 0.66
SCFD1-224ENST00000557713 DDRGK1Q96HY6 314 aa19.18■□□□□ 0.66
SCFD1-224ENST00000557713 MAML3Q96JK9 1138 aa19.18■□□□□ 0.66
SCFD1-224ENST00000557713 MYH8P13535 1937 aa19.17■□□□□ 0.66
SCFD1-224ENST00000557713 SLC25A27O95847 323 aa19.17■□□□□ 0.66
SCFD1-224ENST00000557713 FCER1AP12319 257 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms