RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 USP17L12C9JPN9 530 aa12.75□□□□□ -0.37
PSMC6-215ENST00000557517 USP17L21D6R901 530 aa12.75□□□□□ -0.37
PSMC6-215ENST00000557517 SGPL1O95470 568 aa12.75□□□□□ -0.37
PSMC6-215ENST00000557517 XRCC5P13010 732 aaKnown RBP12.75□□□□□ -0.37
PSMC6-215ENST00000557517 ELNP15502 786 aa12.75□□□□□ -0.37
PSMC6-215ENST00000557517 SEPT2Q15019 361 aa12.75□□□□□ -0.37
PSMC6-215ENST00000557517 LAMA3Q16787 3333 aa12.75□□□□□ -0.37
PSMC6-215ENST00000557517 KBTBD3Q8NAB2 608 aa12.75□□□□□ -0.37
PSMC6-215ENST00000557517 SLC17A8Q8NDX2 589 aa12.75□□□□□ -0.37
PSMC6-215ENST00000557517 U2AF1L4Q8WU68 220 aaKnown RBP12.75□□□□□ -0.37
PSMC6-215ENST00000557517 DOCK2Q92608 1830 aa12.75□□□□□ -0.37
PSMC6-215ENST00000557517 CCDC17Q96LX7 622 aa12.75□□□□□ -0.37
PSMC6-215ENST00000557517 STRBPQ96SI9 672 aaKnown RBP12.75□□□□□ -0.37
PSMC6-215ENST00000557517 UNC93B1Q9H1C4 597 aa12.75□□□□□ -0.37
PSMC6-215ENST00000557517 PAK6Q9NQU5 681 aaPredicted RBP12.75□□□□□ -0.37
PSMC6-215ENST00000557517 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
PSMC6-215ENST00000557517 RABGAP1Q9Y3P9 1069 aa12.75□□□□□ -0.37
PSMC6-215ENST00000557517 PEX10O60683 326 aa12.74□□□□□ -0.37
PSMC6-215ENST00000557517 INHAP05111 366 aa12.74□□□□□ -0.37
PSMC6-215ENST00000557517 CYP2D6P10635 497 aa12.74□□□□□ -0.37
PSMC6-215ENST00000557517 VCAM1P19320 739 aa12.74□□□□□ -0.37
PSMC6-215ENST00000557517 MAPK4P31152 587 aa12.74□□□□□ -0.37
PSMC6-215ENST00000557517 CTR9Q6PD62 1173 aa12.74□□□□□ -0.37
PSMC6-215ENST00000557517 TMEM179Q6ZVK1 233 aa12.74□□□□□ -0.37
PSMC6-215ENST00000557517 USP6NLQ92738 828 aa12.74□□□□□ -0.37
PSMC6-215ENST00000557517 DYNLL2Q96FJ2 89 aa12.74□□□□□ -0.37
PSMC6-215ENST00000557517 A0A1W2PPC1 479 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 SMIM22K7EJ46 135 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 CNMDO75829 334 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 CDK8P49336 464 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 RRP1P56182 461 aaKnown RBP12.73□□□□□ -0.37
PSMC6-215ENST00000557517 ERVK-9P63128 1117 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 ERVK-24P63145 666 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 PDAP1Q13442 181 aaKnown RBP12.73□□□□□ -0.37
PSMC6-215ENST00000557517 GIMAP6Q6P9H5 292 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 SLC44A5Q8NCS7 719 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 DPF3Q92784 378 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 OSBP2Q969R2 916 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 FEZ1Q99689 392 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 CRISPLD2Q9H0B8 497 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 HOXC10Q9NYD6 342 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 TMX2Q9Y320 296 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 SLC4A4Q9Y6R1 1079 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 DOCK1Q14185 1865 aa12.73□□□□□ -0.37
PSMC6-215ENST00000557517 AK9Q5TCS8 1911 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 PHIPQ8WWQ0 1821 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 MAST2Q6P0Q8 1798 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 TTC41PQ6P2S7 1318 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 GSG1L2A8MUP6 293 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 RNF113AO15541 343 aaKnown RBP12.72□□□□□ -0.37
PSMC6-215ENST00000557517 ZFYP08048 801 aaPredicted RBP12.72□□□□□ -0.37
PSMC6-215ENST00000557517 COG2Q14746 738 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 ZYXQ15942 572 aaKnown RBP12.72□□□□□ -0.37
PSMC6-215ENST00000557517 SBK1Q52WX2 424 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 MORN1Q5T089 497 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 MAP3K21Q5TCX8 1036 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 C16orf86Q6ZW13 317 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 APPBP2Q92624 585 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 DDRGK1Q96HY6 314 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 GPATCH3Q96I76 525 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 NUDT12Q9BQG2 462 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 HTATIP2Q9BUP3 242 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 PORCNQ9H237 461 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 SIPA1L1O43166 1804 aa12.72□□□□□ -0.37
PSMC6-215ENST00000557517 RPTORQ8N122 1335 aa12.71□□□□□ -0.37
PSMC6-215ENST00000557517 CYP2D7A0A087X1C5 515 aa12.71□□□□□ -0.37
PSMC6-215ENST00000557517 MPHOSPH10O00566 681 aaKnown RBP12.71□□□□□ -0.37
PSMC6-215ENST00000557517 HMGCRP04035 888 aa12.71□□□□□ -0.37
PSMC6-215ENST00000557517 AKR1B1P15121 316 aa12.71□□□□□ -0.37
PSMC6-215ENST00000557517 GPR142Q7Z601 462 aa12.71□□□□□ -0.37
PSMC6-215ENST00000557517 TRMT44Q8IYL2 757 aaKnown RBP12.71□□□□□ -0.37
PSMC6-215ENST00000557517 PI4K2BQ8TCG2 481 aa12.71□□□□□ -0.37
PSMC6-215ENST00000557517 SOCS4Q8WXH5 440 aa12.71□□□□□ -0.37
PSMC6-215ENST00000557517 LPAR1Q92633 364 aa12.71□□□□□ -0.37
PSMC6-215ENST00000557517 DEFB118Q96PH6 123 aa12.71□□□□□ -0.37
PSMC6-215ENST00000557517 RPAP3Q9H6T3 665 aaPredicted RBP12.71□□□□□ -0.37
PSMC6-215ENST00000557517 KANSL2Q9H9L4 492 aa12.71□□□□□ -0.37
PSMC6-215ENST00000557517 BTBD7Q9P203 1132 aa12.71□□□□□ -0.37
PSMC6-215ENST00000557517 SPDYE16A6NNV3 312 aaPredicted RBP12.7□□□□□ -0.38
PSMC6-215ENST00000557517 GLRX3O76003 335 aaKnown RBP12.7□□□□□ -0.38
PSMC6-215ENST00000557517 TFRCP02786 760 aaKnown RBP12.7□□□□□ -0.38
PSMC6-215ENST00000557517 CYP2B6P20813 491 aa12.7□□□□□ -0.38
PSMC6-215ENST00000557517 CCNA1P78396 465 aa12.7□□□□□ -0.38
PSMC6-215ENST00000557517 HDAC1Q13547 482 aaPredicted RBP12.7□□□□□ -0.38
PSMC6-215ENST00000557517 KIAA1755Q5JYT7 1200 aa12.7□□□□□ -0.38
PSMC6-215ENST00000557517 TSHZ3Q63HK5 1081 aa12.7□□□□□ -0.38
PSMC6-215ENST00000557517 PLEKHH3Q7Z736 793 aa12.7□□□□□ -0.38
PSMC6-215ENST00000557517 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
PSMC6-215ENST00000557517 AMOTL1Q8IY63 956 aa12.7□□□□□ -0.38
PSMC6-215ENST00000557517 TRIB2Q92519 343 aa12.7□□□□□ -0.38
PSMC6-215ENST00000557517 PAGR1Q9BTK6 254 aa12.7□□□□□ -0.38
PSMC6-215ENST00000557517 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.7□□□□□ -0.38
PSMC6-215ENST00000557517 HMX1Q9NP08 348 aaPredicted RBP12.7□□□□□ -0.38
PSMC6-215ENST00000557517 ARPP21Q9UBL0 812 aaPredicted RBP12.7□□□□□ -0.38
PSMC6-215ENST00000557517 NR2E3Q9Y5X4 410 aa12.7□□□□□ -0.38
PSMC6-215ENST00000557517 SALL3Q9BXA9 1300 aa12.69□□□□□ -0.38
PSMC6-215ENST00000557517 PATL2C9JE40 543 aaKnown RBP12.69□□□□□ -0.38
PSMC6-215ENST00000557517 SOX1O00570 391 aaPredicted RBP12.69□□□□□ -0.38
PSMC6-215ENST00000557517 ERC2O15083 957 aa12.69□□□□□ -0.38
PSMC6-215ENST00000557517 IGHA2P01877 340 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms