RNA–Protein interactions for RNA: ENST00000557488.1

ITGA7-219, Transcript of integrin subunit alpha 7, humanhuman

TSL 3

Gene ITGA7, Length 296 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-219ENST00000557488 NYAP2Q9P242 653 aa17.13■□□□□ 0.33
ITGA7-219ENST00000557488 SLC45A1Q9Y2W3 748 aa17.13■□□□□ 0.33
ITGA7-219ENST00000557488 RBM8AQ9Y5S9 174 aaKnown RBP17.13■□□□□ 0.33
ITGA7-219ENST00000557488 PARP14Q460N5 1801 aa17.12■□□□□ 0.33
ITGA7-219ENST00000557488 TSPY2A6NKD2 308 aa17.12■□□□□ 0.33
ITGA7-219ENST00000557488 B4E1Z4 1266 aa17.12■□□□□ 0.33
ITGA7-219ENST00000557488 CDC45O75419 566 aa17.12■□□□□ 0.33
ITGA7-219ENST00000557488 SP3Q02447 781 aa17.12■□□□□ 0.33
ITGA7-219ENST00000557488 NOM1Q5C9Z4 860 aaKnown RBP17.12■□□□□ 0.33
ITGA7-219ENST00000557488 MFSD6Q6ZSS7 791 aa17.12■□□□□ 0.33
ITGA7-219ENST00000557488 MKL1Q969V6 931 aa17.12■□□□□ 0.33
ITGA7-219ENST00000557488 VCPKMTQ9H867 229 aa17.12■□□□□ 0.33
ITGA7-219ENST00000557488 ARHGEF10LQ9HCE6 1279 aa17.12■□□□□ 0.33
ITGA7-219ENST00000557488 RBPJLQ9UBG7 517 aa17.12■□□□□ 0.33
ITGA7-219ENST00000557488 MGAMO43451 1857 aa17.12■□□□□ 0.33
ITGA7-219ENST00000557488 CNMDO75829 334 aa17.11■□□□□ 0.33
ITGA7-219ENST00000557488 NOVP48745 357 aa17.11■□□□□ 0.33
ITGA7-219ENST00000557488 RCSD1Q6JBY9 416 aa17.11■□□□□ 0.33
ITGA7-219ENST00000557488 CYB5R4Q7L1T6 521 aa17.11■□□□□ 0.33
ITGA7-219ENST00000557488 ANKRD13CQ8N6S4 541 aa17.11■□□□□ 0.33
ITGA7-219ENST00000557488 FBXO28Q9NVF7 368 aa17.11■□□□□ 0.33
ITGA7-219ENST00000557488 ZSWIM5Q9P217 1185 aa17.11■□□□□ 0.33
ITGA7-219ENST00000557488 USP17L15C9J2P7 530 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 USP17L13C9JLJ4 530 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 USP17L11C9JVI0 530 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 USP17L18D6R9N7 530 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 USP17L22D6RA61 530 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 USP17L17D6RBQ6 530 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 USP17L19D6RCP7 530 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 USP17L20D6RJB6 530 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 F5H6K3 240 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 KDM4AO75164 1064 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 OSBPP22059 807 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 USP14P54578 494 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 KLRC3Q07444 240 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 USP17L24Q0WX57 530 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 NECTIN1Q15223 517 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 IMMTQ16891 758 aaKnown RBP17.1■□□□□ 0.33
ITGA7-219ENST00000557488 PARK7Q99497 189 aaKnown RBP17.1■□□□□ 0.33
ITGA7-219ENST00000557488 ZNF287Q9HBT7 754 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 CTNNA3Q9UI47 895 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 U3KPZ7 1027 aaPredicted RBP17.1■□□□□ 0.33
ITGA7-219ENST00000557488 PLIN4Q96Q06 1357 aa17.1■□□□□ 0.33
ITGA7-219ENST00000557488 RAD21O60216 631 aa17.09■□□□□ 0.33
ITGA7-219ENST00000557488 NDUFB10O96000 172 aa17.09■□□□□ 0.33
ITGA7-219ENST00000557488 HERVK_113P62684 666 aa17.09■□□□□ 0.33
ITGA7-219ENST00000557488 FAM83BQ5T0W9 1011 aa17.09■□□□□ 0.33
ITGA7-219ENST00000557488 ANO2Q9NQ90 1003 aa17.09■□□□□ 0.33
ITGA7-219ENST00000557488 BTBD7Q9P203 1132 aa17.09■□□□□ 0.33
ITGA7-219ENST00000557488 SMCHD1A6NHR9 2005 aa17.08■□□□□ 0.33
ITGA7-219ENST00000557488 COL11A1P12107 1806 aaPredicted RBP17.08■□□□□ 0.33
ITGA7-219ENST00000557488 E7EWF7 191 aa17.08■□□□□ 0.32
ITGA7-219ENST00000557488 SLC27A2O14975 620 aa17.08■□□□□ 0.32
ITGA7-219ENST00000557488 TTLL1O95922 423 aa17.08■□□□□ 0.32
ITGA7-219ENST00000557488 IRX3P78415 501 aaPredicted RBP17.08■□□□□ 0.32
ITGA7-219ENST00000557488 LACTBP83111 547 aaPredicted RBP17.08■□□□□ 0.32
ITGA7-219ENST00000557488 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
ITGA7-219ENST00000557488 CHST3Q7LGC8 479 aa17.08■□□□□ 0.32
ITGA7-219ENST00000557488 TMEM47Q9BQJ4 181 aa17.08■□□□□ 0.32
ITGA7-219ENST00000557488 MCOLN1Q9GZU1 580 aa17.08■□□□□ 0.32
ITGA7-219ENST00000557488 SENP2Q9HC62 589 aa17.08■□□□□ 0.32
ITGA7-219ENST00000557488 TCP11L1Q9NUJ3 509 aa17.08■□□□□ 0.32
ITGA7-219ENST00000557488 MTMR7Q9Y216 660 aa17.08■□□□□ 0.32
ITGA7-219ENST00000557488 SPDYE16A6NNV3 312 aaPredicted RBP17.07■□□□□ 0.32
ITGA7-219ENST00000557488 DSG3P32926 999 aa17.07■□□□□ 0.32
ITGA7-219ENST00000557488 CREB3L3Q68CJ9 461 aa17.07■□□□□ 0.32
ITGA7-219ENST00000557488 KIAA1211Q6ZU35 1233 aa17.07■□□□□ 0.32
ITGA7-219ENST00000557488 OTOP1Q7RTM1 612 aa17.07■□□□□ 0.32
ITGA7-219ENST00000557488 RASEFQ8IZ41 740 aa17.07■□□□□ 0.32
ITGA7-219ENST00000557488 SMCR8Q8TEV9 937 aaPredicted RBP17.07■□□□□ 0.32
ITGA7-219ENST00000557488 ATG4CQ96DT6 458 aa17.07■□□□□ 0.32
ITGA7-219ENST00000557488 TRIM47Q96LD4 638 aa17.07■□□□□ 0.32
ITGA7-219ENST00000557488 GPHNQ9NQX3 736 aaPredicted RBP17.07■□□□□ 0.32
ITGA7-219ENST00000557488 STX8Q9UNK0 236 aa17.07■□□□□ 0.32
ITGA7-219ENST00000557488 MCCP23508 829 aa17.06■□□□□ 0.32
ITGA7-219ENST00000557488 PSMC4P43686 418 aa17.06■□□□□ 0.32
ITGA7-219ENST00000557488 ANTXR2P58335 489 aa17.06■□□□□ 0.32
ITGA7-219ENST00000557488 PABPC4Q13310 644 aaKnown RBP eCLIP17.06■□□□□ 0.32
ITGA7-219ENST00000557488 COG2Q14746 738 aa17.06■□□□□ 0.32
ITGA7-219ENST00000557488 SLFN13Q68D06 897 aa17.06■□□□□ 0.32
ITGA7-219ENST00000557488 CTU1Q7Z7A3 348 aaKnown RBP17.06■□□□□ 0.32
ITGA7-219ENST00000557488 PAGR1Q9BTK6 254 aa17.06■□□□□ 0.32
ITGA7-219ENST00000557488 TANGO6Q9C0B7 1094 aa17.06■□□□□ 0.32
ITGA7-219ENST00000557488 RNF41Q9H4P4 317 aaPredicted RBP17.06■□□□□ 0.32
ITGA7-219ENST00000557488 PNMA3Q9UL41 463 aa17.06■□□□□ 0.32
ITGA7-219ENST00000557488 GABRQQ9UN88 632 aa17.06■□□□□ 0.32
ITGA7-219ENST00000557488 TRIM17Q9Y577 477 aa17.06■□□□□ 0.32
ITGA7-219ENST00000557488 PLXNB2O15031 1838 aa17.05■□□□□ 0.32
ITGA7-219ENST00000557488 TTBK2Q6IQ55 1244 aa17.05■□□□□ 0.32
ITGA7-219ENST00000557488 LPAR1Q92633 364 aa17.05■□□□□ 0.32
ITGA7-219ENST00000557488 ESR2Q92731 530 aa17.05■□□□□ 0.32
ITGA7-219ENST00000557488 ERO1AQ96HE7 468 aa17.05■□□□□ 0.32
ITGA7-219ENST00000557488 PORCNQ9H237 461 aa17.05■□□□□ 0.32
ITGA7-219ENST00000557488 MORF4L1Q9UBU8 362 aa17.05■□□□□ 0.32
ITGA7-219ENST00000557488 WDR46O15213 610 aaKnown RBP17.04■□□□□ 0.32
ITGA7-219ENST00000557488 FLOT1O75955 427 aa17.04■□□□□ 0.32
ITGA7-219ENST00000557488 PCP11498 1178 aaKnown RBP17.04■□□□□ 0.32
ITGA7-219ENST00000557488 GCLCP48506 637 aaPredicted RBP17.04■□□□□ 0.32
ITGA7-219ENST00000557488 SNAP25P60880 206 aa17.04■□□□□ 0.32
ITGA7-219ENST00000557488 SEC23AQ15436 765 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms