RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 CEP95Q96GE4 821 aa12.53□□□□□ -0.4
HNRNPC-232ENST00000557442 ASCC2Q9H1I8 757 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-232ENST00000557442 ANO2Q9NQ90 1003 aa12.53□□□□□ -0.4
HNRNPC-232ENST00000557442 CPA4Q9UI42 421 aa12.53□□□□□ -0.4
HNRNPC-232ENST00000557442 TMX2Q9Y320 296 aa12.53□□□□□ -0.4
HNRNPC-232ENST00000557442 U3KPZ7 1027 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-232ENST00000557442 HTTP42858 3142 aa12.52□□□□□ -0.41
HNRNPC-232ENST00000557442 IGKV6D-41A0A0C4DH26 115 aa12.52□□□□□ -0.41
HNRNPC-232ENST00000557442 FGRP09769 529 aa12.52□□□□□ -0.41
HNRNPC-232ENST00000557442 SIAH1Q8IUQ4 282 aa12.52□□□□□ -0.41
HNRNPC-232ENST00000557442 SPICE1Q8N0Z3 855 aa12.52□□□□□ -0.41
HNRNPC-232ENST00000557442 VCPKMTQ9H867 229 aa12.52□□□□□ -0.41
HNRNPC-232ENST00000557442 GOPCQ9HD26 462 aa12.52□□□□□ -0.41
HNRNPC-232ENST00000557442 NYAP2Q9P242 653 aa12.52□□□□□ -0.41
HNRNPC-232ENST00000557442 PLXNA1Q9UIW2 1896 aa12.52□□□□□ -0.41
HNRNPC-232ENST00000557442 NMT2O60551 498 aa12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 TTLL1O95922 423 aa12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 HOXA7P31268 230 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 SP3Q02447 781 aa12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 COL13A1Q5TAT6 717 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 LRRC47Q8N1G4 583 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 LPAR1Q92633 364 aa12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 ESR2Q92731 530 aa12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 ERO1AQ96HE7 468 aa12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 TANGO6Q9C0B7 1094 aa12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 LSG1Q9H089 658 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 RPAP3Q9H6T3 665 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 MTMR4Q9NYA4 1195 aa12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 CLIP2Q9UDT6 1046 aa12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 STX8Q9UNK0 236 aa12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 RBM8AQ9Y5S9 174 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-232ENST00000557442 CENPFP49454 3210 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 B4E1Z4 1266 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 USP17L15C9J2P7 530 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 USP17L13C9JLJ4 530 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 USP17L11C9JVI0 530 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 USP17L18D6R9N7 530 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 USP17L22D6RA61 530 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 USP17L17D6RBQ6 530 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 USP17L19D6RCP7 530 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 USP17L20D6RJB6 530 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 WDR46O15213 610 aaKnown RBP12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 CAPN15O75808 1086 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 CYP21A2P08686 494 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 USP17L24Q0WX57 530 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 KIAA1755Q5JYT7 1200 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 PPP4R3BQ5MIZ7 849 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 C17orf99Q6UX52 265 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 ANKRD13CQ8N6S4 541 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 CD99L2Q8TCZ2 262 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 MAP4K1Q92918 833 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 CNNM2Q9H8M5 875 aa12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 RBBP6Q7Z6E9 1792 aaKnown RBP12.5□□□□□ -0.41
HNRNPC-232ENST00000557442 SMCHD1A6NHR9 2005 aa12.49□□□□□ -0.41
HNRNPC-232ENST00000557442 KDM4AO75164 1064 aa12.49□□□□□ -0.41
HNRNPC-232ENST00000557442 ECM2O94769 699 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-232ENST00000557442 BCRP11274 1271 aa12.49□□□□□ -0.41
HNRNPC-232ENST00000557442 GCLCP48506 637 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-232ENST00000557442 HERVK_113P62684 666 aa12.49□□□□□ -0.41
HNRNPC-232ENST00000557442 LACTBP83111 547 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-232ENST00000557442 KIF22Q14807 665 aa12.49□□□□□ -0.41
HNRNPC-232ENST00000557442 KRT23Q9C075 422 aa12.49□□□□□ -0.41
HNRNPC-232ENST00000557442 IL17RBQ9NRM6 502 aa12.49□□□□□ -0.41
HNRNPC-232ENST00000557442 F5H6K3 240 aa12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 NDUFB10O96000 172 aa12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 NT5C2P49902 561 aa12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 KLRC3Q07444 240 aa12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 TRDNQ13061 729 aa12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 FAM110CQ1W6H9 321 aa12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 FAM83BQ5T0W9 1011 aa12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 CATSPERGQ6ZRH7 1159 aa12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 CTU1Q7Z7A3 348 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 NKX2-3Q8TAU0 364 aa12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 NUP88Q99567 741 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 P2RX7Q99572 595 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 ZKSCAN3Q9BRR0 538 aa12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 PAGR1Q9BTK6 254 aa12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 ISY1Q9ULR0 285 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 SYNPO2Q9UMS6 1093 aa12.48□□□□□ -0.41
HNRNPC-232ENST00000557442 FLOT1O75955 427 aa12.47□□□□□ -0.41
HNRNPC-232ENST00000557442 RALYLQ86SE5 291 aaKnown RBP12.47□□□□□ -0.41
HNRNPC-232ENST00000557442 IQCA1Q86XH1 822 aa12.47□□□□□ -0.41
HNRNPC-232ENST00000557442 GMCL1P1Q8NEA9 526 aa12.47□□□□□ -0.41
HNRNPC-232ENST00000557442 GTF3C2Q8WUA4 911 aaPredicted RBP12.47□□□□□ -0.41
HNRNPC-232ENST00000557442 MKL1Q969V6 931 aa12.47□□□□□ -0.41
HNRNPC-232ENST00000557442 ARHGAP39Q9C0H5 1083 aa12.47□□□□□ -0.41
HNRNPC-232ENST00000557442 TCP11L1Q9NUJ3 509 aa12.47□□□□□ -0.41
HNRNPC-232ENST00000557442 TRIM17Q9Y577 477 aa12.47□□□□□ -0.41
HNRNPC-232ENST00000557442 TAF6LQ9Y6J9 622 aa12.47□□□□□ -0.41
HNRNPC-232ENST00000557442 ZNF236Q9UL36 1845 aa12.47□□□□□ -0.41
HNRNPC-232ENST00000557442 SPDYE16A6NNV3 312 aaPredicted RBP12.46□□□□□ -0.41
HNRNPC-232ENST00000557442 E7EWF7 191 aa12.46□□□□□ -0.41
HNRNPC-232ENST00000557442 CAP1Q01518 475 aa12.46□□□□□ -0.41
HNRNPC-232ENST00000557442 COG2Q14746 738 aa12.46□□□□□ -0.41
HNRNPC-232ENST00000557442 ARHGEF6Q15052 776 aa12.46□□□□□ -0.41
HNRNPC-232ENST00000557442 CREB3L3Q68CJ9 461 aa12.46□□□□□ -0.41
HNRNPC-232ENST00000557442 SLFN13Q68D06 897 aa12.46□□□□□ -0.41
HNRNPC-232ENST00000557442 STOX1Q6ZVD7 989 aa12.46□□□□□ -0.41
HNRNPC-232ENST00000557442 TNS4Q8IZW8 715 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms