RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SLC15A5A6NIM6 579 aa17.1■□□□□ 0.33
SLIRP-210ENST00000557431 GOLIM4O00461 696 aa17.1■□□□□ 0.33
SLIRP-210ENST00000557431 ATP2B2Q01814 1243 aa17.1■□□□□ 0.33
SLIRP-210ENST00000557431 GRB14Q14449 540 aa17.1■□□□□ 0.33
SLIRP-210ENST00000557431 SLC9C2Q5TAH2 1124 aa17.1■□□□□ 0.33
SLIRP-210ENST00000557431 RHPN1Q8TCX5 695 aa17.1■□□□□ 0.33
SLIRP-210ENST00000557431 MOV10L1Q9BXT6 1211 aaKnown RBP17.1■□□□□ 0.33
SLIRP-210ENST00000557431 TANGO6Q9C0B7 1094 aa17.1■□□□□ 0.33
SLIRP-210ENST00000557431 ARMT1Q9H993 441 aa17.1■□□□□ 0.33
SLIRP-210ENST00000557431 DDX20Q9UHI6 824 aaKnown RBP17.1■□□□□ 0.33
SLIRP-210ENST00000557431 IVNS1ABPQ9Y6Y0 642 aa17.1■□□□□ 0.33
SLIRP-210ENST00000557431 CYP2D7A0A087X1C5 515 aa17.09■□□□□ 0.33
SLIRP-210ENST00000557431 PRKAB2O43741 272 aa17.09■□□□□ 0.33
SLIRP-210ENST00000557431 GLRX3O76003 335 aaKnown RBP17.09■□□□□ 0.33
SLIRP-210ENST00000557431 MYCNP04198 464 aaPredicted RBP17.09■□□□□ 0.33
SLIRP-210ENST00000557431 LRIT3Q3SXY7 679 aa17.09■□□□□ 0.33
SLIRP-210ENST00000557431 GJC2Q5T442 439 aaPredicted RBP17.09■□□□□ 0.33
SLIRP-210ENST00000557431 LBX2Q6XYB7 198 aa17.09■□□□□ 0.33
SLIRP-210ENST00000557431 CRNKL1Q9BZJ0 848 aaKnown RBP17.09■□□□□ 0.33
SLIRP-210ENST00000557431 MTMR10Q9NXD2 777 aa17.09■□□□□ 0.33
SLIRP-210ENST00000557431 GREB1LQ9C091 1923 aaPredicted RBP17.09■□□□□ 0.33
SLIRP-210ENST00000557431 DNAH12Q6ZR08 3092 aa17.08■□□□□ 0.33
SLIRP-210ENST00000557431 TCRBV5S4A2TA0A5A2 114 aa17.08■□□□□ 0.32
SLIRP-210ENST00000557431 ADORA2AP29274 412 aa17.08■□□□□ 0.32
SLIRP-210ENST00000557431 PRAMEF19Q5SWL8 479 aa17.08■□□□□ 0.32
SLIRP-210ENST00000557431 ERC1Q8IUD2 1116 aa17.08■□□□□ 0.32
SLIRP-210ENST00000557431 SPICE1Q8N0Z3 855 aa17.08■□□□□ 0.32
SLIRP-210ENST00000557431 FAM161BQ96MY7 647 aa17.08■□□□□ 0.32
SLIRP-210ENST00000557431 DCP1AQ9NPI6 582 aaPredicted RBP17.08■□□□□ 0.32
SLIRP-210ENST00000557431 CYBAP13498 195 aa17.07■□□□□ 0.32
SLIRP-210ENST00000557431 AKR1B1P15121 316 aa17.07■□□□□ 0.32
SLIRP-210ENST00000557431 ERCC3P19447 782 aa17.07■□□□□ 0.32
SLIRP-210ENST00000557431 RTP1P59025 263 aa17.07■□□□□ 0.32
SLIRP-210ENST00000557431 PLS1Q14651 629 aa17.07■□□□□ 0.32
SLIRP-210ENST00000557431 DPP9Q86TI2 863 aa17.07■□□□□ 0.32
SLIRP-210ENST00000557431 CERS3Q8IU89 383 aa17.07■□□□□ 0.32
SLIRP-210ENST00000557431 ATG4CQ96DT6 458 aa17.07■□□□□ 0.32
SLIRP-210ENST00000557431 IGSF3O75054 1194 aa17.06■□□□□ 0.32
SLIRP-210ENST00000557431 COBLO75128 1261 aa17.06■□□□□ 0.32
SLIRP-210ENST00000557431 HOXC6P09630 235 aa17.06■□□□□ 0.32
SLIRP-210ENST00000557431 MIER1Q8N108 512 aa17.06■□□□□ 0.32
SLIRP-210ENST00000557431 SPATC1LQ9H0A9 340 aa17.06■□□□□ 0.32
SLIRP-210ENST00000557431 BOLA2Q9H3K6 86 aa17.06■□□□□ 0.32
SLIRP-210ENST00000557431 ATP11BQ9Y2G3 1177 aa17.06■□□□□ 0.32
SLIRP-210ENST00000557431 MBD4O95243 580 aa17.05■□□□□ 0.32
SLIRP-210ENST00000557431 COG2Q14746 738 aa17.05■□□□□ 0.32
SLIRP-210ENST00000557431 NCAPG2Q86XI2 1143 aa17.05■□□□□ 0.32
SLIRP-210ENST00000557431 SIAH1Q8IUQ4 282 aa17.05■□□□□ 0.32
SLIRP-210ENST00000557431 SIRT2Q8IXJ6 389 aa17.05■□□□□ 0.32
SLIRP-210ENST00000557431 LPAR1Q92633 364 aa17.05■□□□□ 0.32
SLIRP-210ENST00000557431 FLOT1O75955 427 aa17.04■□□□□ 0.32
SLIRP-210ENST00000557431 IGHA2P01877 340 aa17.04■□□□□ 0.32
SLIRP-210ENST00000557431 DSG3P32926 999 aa17.04■□□□□ 0.32
SLIRP-210ENST00000557431 TTF1Q15361 905 aaPredicted RBP17.04■□□□□ 0.32
SLIRP-210ENST00000557431 FERMT2Q96AC1 680 aa17.04■□□□□ 0.32
SLIRP-210ENST00000557431 PRDM5Q9NQX1 630 aaPredicted RBP17.04■□□□□ 0.32
SLIRP-210ENST00000557431 COG6Q9Y2V7 657 aa17.04■□□□□ 0.32
SLIRP-210ENST00000557431 DNM1LO00429 736 aa17.03■□□□□ 0.32
SLIRP-210ENST00000557431 IFIT2P09913 472 aaKnown RBP17.03■□□□□ 0.32
SLIRP-210ENST00000557431 ICA1Q05084 483 aa17.03■□□□□ 0.32
SLIRP-210ENST00000557431 GPR153Q6NV75 609 aa17.03■□□□□ 0.32
SLIRP-210ENST00000557431 TMEM179Q6ZVK1 233 aa17.03■□□□□ 0.32
SLIRP-210ENST00000557431 CLASRPQ8N2M8 674 aaKnown RBP17.03■□□□□ 0.32
SLIRP-210ENST00000557431 GUCD1Q96NT3 240 aa17.03■□□□□ 0.32
SLIRP-210ENST00000557431 LBHD1Q9BQE6 289 aaPredicted RBP17.03■□□□□ 0.32
SLIRP-210ENST00000557431 FBXO28Q9NVF7 368 aa17.03■□□□□ 0.32
SLIRP-210ENST00000557431 STXBP5LQ9Y2K9 1186 aa17.03■□□□□ 0.32
SLIRP-210ENST00000557431 MYO9BQ13459 2157 aa17.03■□□□□ 0.32
SLIRP-210ENST00000557431 ADD2P35612 726 aa17.02■□□□□ 0.32
SLIRP-210ENST00000557431 TRIM60Q495X7 471 aa17.02■□□□□ 0.32
SLIRP-210ENST00000557431 FAM47AQ5JRC9 791 aa17.02■□□□□ 0.32
SLIRP-210ENST00000557431 STK11IPQ8N1F8 1099 aa17.02■□□□□ 0.32
SLIRP-210ENST00000557431 KIF1BPQ96EK5 621 aa17.02■□□□□ 0.32
SLIRP-210ENST00000557431 PAG1Q9NWQ8 432 aa17.02■□□□□ 0.32
SLIRP-210ENST00000557431 HOXC10Q9NYD6 342 aa17.02■□□□□ 0.32
SLIRP-210ENST00000557431 RAD21O60216 631 aa17.01■□□□□ 0.31
SLIRP-210ENST00000557431 MSCO60682 206 aa17.01■□□□□ 0.31
SLIRP-210ENST00000557431 CDK8P49336 464 aa17.01■□□□□ 0.31
SLIRP-210ENST00000557431 HSP90AB4PQ58FF6 505 aa17.01■□□□□ 0.31
SLIRP-210ENST00000557431 C9orf50Q5SZB4 431 aa17.01■□□□□ 0.31
SLIRP-210ENST00000557431 OLFML2BQ68BL8 750 aa17.01■□□□□ 0.31
SLIRP-210ENST00000557431 SLC39A5Q6ZMH5 540 aa17.01■□□□□ 0.31
SLIRP-210ENST00000557431 SH3RF1Q7Z6J0 888 aa17.01■□□□□ 0.31
SLIRP-210ENST00000557431 LENG1Q96BZ8 264 aaPredicted RBP17.01■□□□□ 0.31
SLIRP-210ENST00000557431 MAML3Q96JK9 1138 aa17.01■□□□□ 0.31
SLIRP-210ENST00000557431 VCPKMTQ9H867 229 aa17.01■□□□□ 0.31
SLIRP-210ENST00000557431 ARHGEF10LQ9HCE6 1279 aa17.01■□□□□ 0.31
SLIRP-210ENST00000557431 GBF1Q92538 1859 aa17.01■□□□□ 0.31
SLIRP-210ENST00000557431 USP17L12C9JPN9 530 aa17■□□□□ 0.31
SLIRP-210ENST00000557431 KBTBD13C9JR72 458 aa17■□□□□ 0.31
SLIRP-210ENST00000557431 USP17L21D6R901 530 aa17■□□□□ 0.31
SLIRP-210ENST00000557431 PGK2P07205 417 aa17■□□□□ 0.31
SLIRP-210ENST00000557431 ADCYAP1R1P41586 468 aa17■□□□□ 0.31
SLIRP-210ENST00000557431 TMEM132BQ14DG7 1078 aa17■□□□□ 0.31
SLIRP-210ENST00000557431 SHHQ15465 462 aa17■□□□□ 0.31
SLIRP-210ENST00000557431 SHCBP1Q8NEM2 672 aa17■□□□□ 0.31
SLIRP-210ENST00000557431 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17■□□□□ 0.31
SLIRP-210ENST00000557431 PRKAG2Q9UGJ0 569 aa17■□□□□ 0.31
SLIRP-210ENST00000557431 SWAP70Q9UH65 585 aa17■□□□□ 0.31
SLIRP-210ENST00000557431 TMX2Q9Y320 296 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms