RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 SMTNP53814 917 aa11.77□□□□□ -0.52
SUPT16H-207ENST00000557394 AKAP17AQ02040 695 aaKnown RBP11.77□□□□□ -0.52
SUPT16H-207ENST00000557394 CRYMQ14894 314 aa11.77□□□□□ -0.52
SUPT16H-207ENST00000557394 CCDC102BQ68D86 513 aa11.77□□□□□ -0.52
SUPT16H-207ENST00000557394 CCNI2Q6ZMN8 369 aaPredicted RBP11.77□□□□□ -0.52
SUPT16H-207ENST00000557394 RPGRIP1Q96KN7 1286 aa11.77□□□□□ -0.52
SUPT16H-207ENST00000557394 SELENOOQ9BVL4 669 aa11.77□□□□□ -0.52
SUPT16H-207ENST00000557394 CHPF2Q9P2E5 772 aa11.77□□□□□ -0.52
SUPT16H-207ENST00000557394 DACH1Q9UI36 760 aa11.77□□□□□ -0.52
SUPT16H-207ENST00000557394 HOOK1Q9UJC3 728 aaKnown RBP11.77□□□□□ -0.52
SUPT16H-207ENST00000557394 SH3TC1Q8TE82 1336 aa11.77□□□□□ -0.52
SUPT16H-207ENST00000557394 FLT4P35916 1363 aa11.77□□□□□ -0.52
SUPT16H-207ENST00000557394 PPFIA3O75145 1194 aa11.77□□□□□ -0.53
SUPT16H-207ENST00000557394 ABL1P00519 1130 aa11.77□□□□□ -0.53
SUPT16H-207ENST00000557394 EPB41P11171 864 aaKnown RBP11.77□□□□□ -0.53
SUPT16H-207ENST00000557394 MARCKSP29966 332 aaPredicted RBP11.77□□□□□ -0.53
SUPT16H-207ENST00000557394 SARSP49591 514 aaKnown RBP11.77□□□□□ -0.53
SUPT16H-207ENST00000557394 HSP90AA4PQ58FG1 418 aa11.77□□□□□ -0.53
SUPT16H-207ENST00000557394 NBPF14Q5TI25 921 aa11.77□□□□□ -0.53
SUPT16H-207ENST00000557394 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.77□□□□□ -0.53
SUPT16H-207ENST00000557394 UBE3BQ7Z3V4 1068 aa11.77□□□□□ -0.53
SUPT16H-207ENST00000557394 PPFIBP1Q86W92 1011 aa11.77□□□□□ -0.53
SUPT16H-207ENST00000557394 N4BP2L2Q92802 583 aaPredicted RBP11.77□□□□□ -0.53
SUPT16H-207ENST00000557394 KAZALD1Q96I82 304 aa11.77□□□□□ -0.53
SUPT16H-207ENST00000557394 DSCC1Q9BVC3 393 aa11.77□□□□□ -0.53
SUPT16H-207ENST00000557394 IPO5O00410 1097 aaKnown RBP11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 KIAA0754O94854 1291 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 NF2P35240 595 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 CERKQ8TCT0 537 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 SNRNP27Q8WVK2 155 aaKnown RBP11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 PHLPP1O60346 1717 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 ABCA3Q99758 1704 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 E7EWF7 191 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 PSMD14O00487 310 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 TEX33O43247 280 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 LMNB1P20700 586 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 PPP4CP60510 307 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 EIF4A1P60842 406 aaKnown RBP11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 MORC3Q14149 939 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 E2F5Q15329 346 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 TMTC1Q8IUR5 882 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 CNGA4Q8IV77 575 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 TRIML1Q8N9V2 468 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 MAGEC3Q8TD91 643 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 AENQ8WTP8 325 aaKnown RBP11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 RSPH1Q8WYR4 309 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 VCPKMTQ9H867 229 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 SAMSN1Q9NSI8 373 aaKnown RBP11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 KLC4Q9NSK0 619 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 GGA2Q9UJY4 613 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 WWC3Q9ULE0 1092 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 ODF2LQ9ULJ1 636 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 SAMM50Q9Y512 469 aa11.76□□□□□ -0.53
SUPT16H-207ENST00000557394 H0YHG0 523 aa11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 RTN2O75298 545 aa11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 MYBL2P10244 700 aa11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 IRX1P78414 480 aaPredicted RBP11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 IQCA1Q86XH1 822 aa11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 FMNL3Q8IVF7 1028 aa11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 SUCLG2Q96I99 432 aa11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 MAP3K14Q99558 947 aa11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 RMI1Q9H9A7 625 aa11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 ADD3Q9UEY8 706 aaKnown RBP11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 ITIH6Q6UXX5 1313 aa11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 ERCC5P28715 1186 aaPredicted RBP11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 ACTN3Q08043 901 aaPredicted RBP11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 PAPD7Q5XG87 772 aaKnown RBP11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 C16orf87Q6PH81 154 aa11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 MICALCLQ6ZW33 695 aa11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 MMS19Q96T76 1030 aa11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 CWC25Q9NXE8 425 aaPredicted RBP11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 KCNH3Q9ULD8 1083 aa11.75□□□□□ -0.53
SUPT16H-207ENST00000557394 ZMYM6O95789 1325 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 UBAP1LF5GYI3 381 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 NDUFAB1O14561 156 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 GCP02774 474 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 CHGBP05060 677 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 EIF2S2P20042 333 aaKnown RBP11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 PLCD1P51178 756 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 ERVK-24P63145 666 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 CDC37Q16543 378 aaPredicted RBP11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 TRMT44Q8IYL2 757 aaKnown RBP11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 C1orf131Q8NDD1 294 aaKnown RBP11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 RUBCNQ92622 972 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 FAM184BQ9ULE4 1060 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 ZNF232Q9UNY5 417 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 COL16A1Q07092 1604 aaPredicted RBP11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 COL22A1Q8NFW1 1626 aaPredicted RBP11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 FOXN1O15353 648 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 GYPCP04921 128 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 CKAP4Q07065 602 aaKnown RBP11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 IFT88Q13099 833 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 DRP2Q13474 957 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 EMC10Q5UCC4 262 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 LRRC27Q9C0I9 530 aa11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 IQSEC3Q9UPP2 1182 aaPredicted RBP11.74□□□□□ -0.53
SUPT16H-207ENST00000557394 KDM3BQ7LBC6 1761 aa11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 SEMA3EO15041 775 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms