RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 STAG1Q8WVM7 1258 aa8.33□□□□□ -1.08
MTHFD1-215ENST00000557370 STRBPQ96SI9 672 aaKnown RBP8.33□□□□□ -1.08
MTHFD1-215ENST00000557370 PUS7LQ9H0K6 701 aaKnown RBP8.33□□□□□ -1.08
MTHFD1-215ENST00000557370 BRMS1Q9HCU9 246 aa8.33□□□□□ -1.08
MTHFD1-215ENST00000557370 RBM28Q9NW13 759 aaKnown RBP8.33□□□□□ -1.08
MTHFD1-215ENST00000557370 ARGLU1Q9NWB6 273 aaPredicted RBP8.33□□□□□ -1.08
MTHFD1-215ENST00000557370 TRMT112Q9UI30 125 aaKnown RBP8.33□□□□□ -1.08
MTHFD1-215ENST00000557370 ZNF330Q9Y3S2 320 aaPredicted RBP8.33□□□□□ -1.08
MTHFD1-215ENST00000557370 CLIC4Q9Y696 253 aa8.33□□□□□ -1.08
MTHFD1-215ENST00000557370 NDUFB9Q9Y6M9 179 aa8.33□□□□□ -1.08
MTHFD1-215ENST00000557370 FAM155AB1AL88 458 aaPredicted RBP8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 SEMA3EO15041 775 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 ARHGAP6O43182 974 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 IDH1O75874 414 aaKnown RBP8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 TBC1D8O95759 1140 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 POLR3DP05423 398 aaPredicted RBP8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 CYP19A1P11511 503 aaPredicted RBP8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 ERCC5P28715 1186 aaPredicted RBP8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 ADORA1P30542 326 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 IGHMBP2P38935 993 aaKnown RBP8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 UBASH3AP57075 661 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 FANCCQ00597 558 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 AKAP17AQ02040 695 aaKnown RBP8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 LRMPQ12912 555 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 COL9A3Q14050 684 aaPredicted RBP8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 CCDC144BQ3MJ40 725 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 CCDC152Q4G0S7 254 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 PPP4R3BQ5MIZ7 849 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 NT5DC1Q5TFE4 455 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 TBC1D9BQ66K14 1250 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 TTLL5Q6EMB2 1281 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 FILIP1Q7Z7B0 1213 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 NOSTRINQ8IVI9 506 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 CCDC144CPQ8IYA2 1237 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 ZNF34Q8IZ26 560 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 IFNL3Q8IZI9 196 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 ZNF710Q8N1W2 664 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 LARGE2Q8N3Y3 721 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 SPATA5Q8NB90 893 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 CNNM3Q8NE01 707 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 IGDCC4Q8TDY8 1250 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 FAM89AQ96GI7 184 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 CTAGE1Q96RT6 745 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 CSRNP1Q96S65 589 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 MPHOSPH8Q99549 860 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 NAA15Q9BXJ9 866 aaKnown RBP8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 RNF26Q9BY78 433 aaPredicted RBP8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 L2HGDHQ9H9P8 463 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 GBA2Q9HCG7 927 aaPredicted RBP8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 NRBP1Q9UHY1 535 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 ANAPC4Q9UJX5 808 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 KCNH3Q9ULD8 1083 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 LAMB2P55268 1798 aa8.32□□□□□ -1.08
MTHFD1-215ENST00000557370 ZNF532Q9HCE3 1301 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 TCRBV5S4A2TA0A5A2 114 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 IFIT3O14879 490 aaKnown RBP8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 FOXP2O15409 715 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 STX10O60499 249 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 SERPINC1P01008 464 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 MMP1P03956 469 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 TUBBP07437 444 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 NPR1P16066 1061 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 PTPREP23469 700 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 HAND2P61296 217 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 GUCY1B3Q02153 619 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 NCBP1Q09161 790 aaKnown RBP8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 WTAPQ15007 396 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 PTPAQ15257 358 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 NTRK3Q16288 839 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 RTN1Q16799 776 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 KRBA2Q6ZNG9 492 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 NIM1KQ8IY84 436 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 C17orf53Q8N3J3 647 aaPredicted RBP8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 ENOX1Q8TC92 643 aaKnown RBP8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 ESR2Q92731 530 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 FERMT2Q96AC1 680 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 SETDB2Q96T68 719 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 XPO4Q9C0E2 1151 aaKnown RBP8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 ZMYND15Q9H091 742 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 GREM2Q9H772 168 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 LY9Q9HBG7 655 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 GPRC5DQ9NZD1 345 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 IFNKQ9P0W0 207 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 ZNF652Q9Y2D9 606 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 ZBTB1Q9Y2K1 713 aa8.31□□□□□ -1.08
MTHFD1-215ENST00000557370 PDS5AQ29RF7 1337 aaKnown RBP8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 SLC10A3P09131 477 aa8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 TOP1P11387 765 aaKnown RBP8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 EN2P19622 333 aaPredicted RBP8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 HOXA7P31268 230 aaPredicted RBP8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 TRAPPC10P48553 1259 aa8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 ETF1P62495 437 aaKnown RBP8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 DMTNQ08495 405 aa8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 BMS1Q14692 1282 aaKnown RBP8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 NCAPHQ15003 741 aa8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 DPCR1Q3MIW9 517 aa8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 CCDC178Q5BJE1 867 aa8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 JAKMIP3Q5VZ66 844 aa8.3□□□□□ -1.08
MTHFD1-215ENST00000557370 CHST3Q7LGC8 479 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms