RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ERVFC1P60507 584 aa7.56□□□□□ -1.2
VRK1-207ENST00000557352 CWF19L2Q2TBE0 894 aaKnown RBP7.56□□□□□ -1.2
VRK1-207ENST00000557352 LCE4AQ5TA78 99 aa7.56□□□□□ -1.2
VRK1-207ENST00000557352 MPZL3Q6UWV2 235 aa7.56□□□□□ -1.2
VRK1-207ENST00000557352 SPOCD1Q6ZMY3 1216 aa7.56□□□□□ -1.2
VRK1-207ENST00000557352 PRR23BQ6ZRT6 265 aa7.56□□□□□ -1.2
VRK1-207ENST00000557352 ASPNQ9BXN1 380 aa7.56□□□□□ -1.2
VRK1-207ENST00000557352 BRMS1Q9HCU9 246 aa7.56□□□□□ -1.2
VRK1-207ENST00000557352 GGT7Q9UJ14 662 aa7.56□□□□□ -1.2
VRK1-207ENST00000557352 SUPT16HQ9Y5B9 1047 aaKnown RBP7.56□□□□□ -1.2
VRK1-207ENST00000557352 SLC22A31A6NKX4 558 aa7.55□□□□□ -1.2
VRK1-207ENST00000557352 RAC2P15153 192 aa7.55□□□□□ -1.2
VRK1-207ENST00000557352 EGR3Q06889 387 aa7.55□□□□□ -1.2
VRK1-207ENST00000557352 ABHD4Q8TB40 342 aa7.55□□□□□ -1.2
VRK1-207ENST00000557352 ZNF296Q8WUU4 475 aaPredicted RBP7.55□□□□□ -1.2
VRK1-207ENST00000557352 VWCEQ96DN2 955 aa7.55□□□□□ -1.2
VRK1-207ENST00000557352 PCDHB14Q9Y5E9 798 aa7.55□□□□□ -1.2
VRK1-207ENST00000557352 RGS13O14921 159 aa7.54□□□□□ -1.2
VRK1-207ENST00000557352 ATE1O95260 518 aa7.54□□□□□ -1.2
VRK1-207ENST00000557352 HPXP02790 462 aa7.54□□□□□ -1.2
VRK1-207ENST00000557352 GBP1P32455 592 aa7.54□□□□□ -1.2
VRK1-207ENST00000557352 MLECQ14165 292 aa7.54□□□□□ -1.2
VRK1-207ENST00000557352 HS2ST1Q7LGA3 356 aa7.54□□□□□ -1.2
VRK1-207ENST00000557352 PCDHA11Q9Y5I1 949 aa7.54□□□□□ -1.2
VRK1-207ENST00000557352 RBM47A0AV96 593 aaKnown RBP7.53□□□□□ -1.2
VRK1-207ENST00000557352 SHISA3A0PJX4 238 aa7.53□□□□□ -1.2
VRK1-207ENST00000557352 LTKP29376 864 aa7.53□□□□□ -1.2
VRK1-207ENST00000557352 CRKP46108 304 aa7.53□□□□□ -1.2
VRK1-207ENST00000557352 FBLN7Q53RD9 439 aa7.53□□□□□ -1.2
VRK1-207ENST00000557352 ARSHQ5FYA8 562 aa7.53□□□□□ -1.2
VRK1-207ENST00000557352 MYLIPQ8WY64 445 aa7.53□□□□□ -1.2
VRK1-207ENST00000557352 ADAMTS1Q9UHI8 967 aa7.53□□□□□ -1.2
VRK1-207ENST00000557352 UBOX5O94941 541 aa7.52□□□□□ -1.21
VRK1-207ENST00000557352 ZGLP1P0C6A0 271 aa7.52□□□□□ -1.21
VRK1-207ENST00000557352 EHMT1Q9H9B1 1298 aa7.52□□□□□ -1.21
VRK1-207ENST00000557352 SP110Q9HB58 689 aa7.52□□□□□ -1.21
VRK1-207ENST00000557352 GMIPQ9P107 970 aa7.52□□□□□ -1.21
VRK1-207ENST00000557352 TSPAN15O95858 294 aa7.51□□□□□ -1.21
VRK1-207ENST00000557352 KRT1P04264 644 aa7.51□□□□□ -1.21
VRK1-207ENST00000557352 RAG1P15918 1043 aa7.51□□□□□ -1.21
VRK1-207ENST00000557352 TRHRP34981 398 aaPredicted RBP7.51□□□□□ -1.21
VRK1-207ENST00000557352 DIRC2Q96SL1 478 aa7.51□□□□□ -1.21
VRK1-207ENST00000557352 NSUN3Q9H649 340 aaKnown RBP7.51□□□□□ -1.21
VRK1-207ENST00000557352 UBP1Q9NZI7 540 aa7.51□□□□□ -1.21
VRK1-207ENST00000557352 RAP1GAPP47736 663 aa7.5□□□□□ -1.21
VRK1-207ENST00000557352 CHMP4BP1P59074 171 aa7.5□□□□□ -1.21
VRK1-207ENST00000557352 CLEC16AQ2KHT3 1053 aa7.5□□□□□ -1.21
VRK1-207ENST00000557352 SEZ6Q53EL9 994 aa7.5□□□□□ -1.21
VRK1-207ENST00000557352 LDLRAD1Q5T700 205 aa7.5□□□□□ -1.21
VRK1-207ENST00000557352 OVOS1Q6IE37 1185 aa7.5□□□□□ -1.21
VRK1-207ENST00000557352 SYDE1Q6ZW31 735 aaPredicted RBP7.5□□□□□ -1.21
VRK1-207ENST00000557352 PDZD8Q8NEN9 1154 aa7.5□□□□□ -1.21
VRK1-207ENST00000557352 BCL11AQ9H165 835 aa7.5□□□□□ -1.21
VRK1-207ENST00000557352 ZNF16P17020 682 aaPredicted RBP7.49□□□□□ -1.21
VRK1-207ENST00000557352 CFPP27918 469 aa7.49□□□□□ -1.21
VRK1-207ENST00000557352 POLR2BP30876 1174 aaKnown RBP7.49□□□□□ -1.21
VRK1-207ENST00000557352 TEKQ02763 1124 aa7.49□□□□□ -1.21
VRK1-207ENST00000557352 CLCQ05315 142 aa7.49□□□□□ -1.21
VRK1-207ENST00000557352 APOBRQ0VD83 1088 aa7.49□□□□□ -1.21
VRK1-207ENST00000557352 CDCP2Q5VXM1 449 aa7.49□□□□□ -1.21
VRK1-207ENST00000557352 C1QL4Q86Z23 238 aa7.49□□□□□ -1.21
VRK1-207ENST00000557352 REXO1Q8N1G1 1221 aaKnown RBP7.49□□□□□ -1.21
VRK1-207ENST00000557352 FBXO15Q8NCQ5 510 aaPredicted RBP7.49□□□□□ -1.21
VRK1-207ENST00000557352 DHX38Q92620 1227 aaKnown RBP7.49□□□□□ -1.21
VRK1-207ENST00000557352 PPP1R16BQ96T49 567 aa7.49□□□□□ -1.21
VRK1-207ENST00000557352 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.49□□□□□ -1.21
VRK1-207ENST00000557352 C19orf44Q9H6X5 657 aa7.49□□□□□ -1.21
VRK1-207ENST00000557352 RNF4P78317 190 aa7.48□□□□□ -1.21
VRK1-207ENST00000557352 NMIQ13287 307 aaPredicted RBP7.48□□□□□ -1.21
VRK1-207ENST00000557352 KRTAP19-4Q3LI73 84 aa7.48□□□□□ -1.21
VRK1-207ENST00000557352 GK5Q6ZS86 529 aa7.48□□□□□ -1.21
VRK1-207ENST00000557352 OXR1Q8N573 874 aa7.48□□□□□ -1.21
VRK1-207ENST00000557352 TMEM87AQ8NBN3 555 aa7.48□□□□□ -1.21
VRK1-207ENST00000557352 ENOX1Q8TC92 643 aaKnown RBP7.48□□□□□ -1.21
VRK1-207ENST00000557352 ATG4CQ96DT6 458 aa7.48□□□□□ -1.21
VRK1-207ENST00000557352 RNF32Q9H0A6 362 aa7.48□□□□□ -1.21
VRK1-207ENST00000557352 ASCC2Q9H1I8 757 aaPredicted RBP7.48□□□□□ -1.21
VRK1-207ENST00000557352 CNNM2Q9H8M5 875 aa7.48□□□□□ -1.21
VRK1-207ENST00000557352 KCNK12Q9HB15 430 aa7.48□□□□□ -1.21
VRK1-207ENST00000557352 EBF1Q9UH73 591 aa7.48□□□□□ -1.21
VRK1-207ENST00000557352 MCM4P33991 863 aa7.47□□□□□ -1.21
VRK1-207ENST00000557352 TIGD5Q53EQ6 642 aa7.47□□□□□ -1.21
VRK1-207ENST00000557352 NBPF12Q5TAG4 269 aaPredicted RBP7.47□□□□□ -1.21
VRK1-207ENST00000557352 LILRA2Q8N149 483 aa7.47□□□□□ -1.21
VRK1-207ENST00000557352 SYTL5Q8TDW5 730 aaPredicted RBP7.47□□□□□ -1.21
VRK1-207ENST00000557352 SYTL4Q96C24 671 aaPredicted RBP7.47□□□□□ -1.21
VRK1-207ENST00000557352 NT5C1AQ9BXI3 368 aa7.47□□□□□ -1.21
VRK1-207ENST00000557352 HDAC8Q9BY41 377 aa7.47□□□□□ -1.21
VRK1-207ENST00000557352 EPB41L4BQ9H329 900 aa7.47□□□□□ -1.21
VRK1-207ENST00000557352 ZNF281Q9Y2X9 895 aa7.47□□□□□ -1.21
VRK1-207ENST00000557352 FITM1A5D6W6 292 aa7.46□□□□□ -1.22
VRK1-207ENST00000557352 C1QTNF9P0C862 333 aa7.46□□□□□ -1.22
VRK1-207ENST00000557352 ZNF165P49910 485 aa7.46□□□□□ -1.22
VRK1-207ENST00000557352 NR0B2Q15466 257 aa7.46□□□□□ -1.22
VRK1-207ENST00000557352 NBPF9Q3BBW0 867 aa7.46□□□□□ -1.22
VRK1-207ENST00000557352 TMCO4Q5TGY1 634 aa7.46□□□□□ -1.22
VRK1-207ENST00000557352 NLRC3Q7RTR2 1065 aa7.46□□□□□ -1.22
VRK1-207ENST00000557352 SLITRK4Q8IW52 837 aa7.46□□□□□ -1.22
VRK1-207ENST00000557352 NKD1Q969G9 470 aa7.46□□□□□ -1.22
VRK1-207ENST00000557352 EAF1Q96JC9 268 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms