RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	TTC6	Q86TZ1	520 aa		13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	SIAH1	Q8IUQ4	282 aa		13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	ANKLE1	Q8NAG6	615 aa		13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	NUDT12	Q9BQG2	462 aa		13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	PAGR1	Q9BTK6	254 aa		13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	BTBD7	Q9P203	1132 aa		13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	STAP2	Q9UGK3	403 aa		13.57	□□□□□ -0.24
HNRNPC-231	ENST00000557336	MAGEB6P1	A0A0J9YX57	407 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	USP17L15	C9J2P7	530 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	USP17L13	C9JLJ4	530 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	USP17L11	C9JVI0	530 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	USP17L18	D6R9N7	530 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	USP17L22	D6RA61	530 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	USP17L17	D6RBQ6	530 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	USP17L19	D6RCP7	530 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	USP17L20	D6RJB6	530 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	APBB1	O00213	710 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	GOLIM4	O00461	696 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	SOX1	O00570	391 aa	Predicted RBP	13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	IGHA2	P01877	340 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	CYP2D6	P10635	497 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	USP17L24	Q0WX57	530 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	SEPT2	Q15019	361 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	RAB3GAP1	Q15042	981 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	KIAA1755	Q5JYT7	1200 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	LBX2	Q6XYB7	198 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	PLEKHH3	Q7Z736	793 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	LCORL	Q8N3X6	602 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	SOCS4	Q8WXH5	440 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	FLRT1	Q9NZU1	646 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	COG6	Q9Y2V7	657 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	RABGAP1	Q9Y3P9	1069 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	PFAS	O15067	1338 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	ZNF532	Q9HCE3	1301 aa		13.56	□□□□□ -0.24
HNRNPC-231	ENST00000557336	PRKAB2	O43741	272 aa		13.55	□□□□□ -0.24
HNRNPC-231	ENST00000557336	COL6A1	P12109	1028 aa		13.55	□□□□□ -0.24
HNRNPC-231	ENST00000557336	CCND3	P30281	292 aa	Predicted RBP	13.55	□□□□□ -0.24
HNRNPC-231	ENST00000557336	HSP90AB4P	Q58FF6	505 aa		13.55	□□□□□ -0.24
HNRNPC-231	ENST00000557336	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.55	□□□□□ -0.24
HNRNPC-231	ENST00000557336	SLC44A5	Q8NCS7	719 aa		13.55	□□□□□ -0.24
HNRNPC-231	ENST00000557336	SDR42E1	Q8WUS8	393 aa		13.55	□□□□□ -0.24
HNRNPC-231	ENST00000557336	KIF1BP	Q96EK5	621 aa		13.55	□□□□□ -0.24
HNRNPC-231	ENST00000557336	GDF15	Q99988	308 aa		13.55	□□□□□ -0.24
HNRNPC-231	ENST00000557336	NBPF3	Q9H094	633 aa		13.55	□□□□□ -0.24
HNRNPC-231	ENST00000557336	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.55	□□□□□ -0.24
HNRNPC-231	ENST00000557336	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.54	□□□□□ -0.24
HNRNPC-231	ENST00000557336	PPP1R37	O75864	691 aa		13.54	□□□□□ -0.24
HNRNPC-231	ENST00000557336	MAP2K5	Q13163	448 aa		13.54	□□□□□ -0.24
HNRNPC-231	ENST00000557336	TTF1	Q15361	905 aa	Predicted RBP	13.54	□□□□□ -0.24
HNRNPC-231	ENST00000557336	CLASRP	Q8N2M8	674 aa	Known RBP	13.54	□□□□□ -0.24
HNRNPC-231	ENST00000557336	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.54	□□□□□ -0.24
HNRNPC-231	ENST00000557336	FEZ1	Q99689	392 aa		13.54	□□□□□ -0.24
HNRNPC-231	ENST00000557336	ARMT1	Q9H993	441 aa		13.54	□□□□□ -0.24
HNRNPC-231	ENST00000557336	MCM9	Q9NXL9	1143 aa		13.54	□□□□□ -0.24
HNRNPC-231	ENST00000557336	POLR3D	P05423	398 aa	Predicted RBP	13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	ZKSCAN1	P17029	563 aa	Predicted RBP	13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	PTPRE	P23469	700 aa		13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	ADD2	P35612	726 aa		13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	RGS2	P41220	211 aa		13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	USP14	P54578	494 aa		13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	C20orf194	Q5TEA3	1177 aa		13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	CLEC10A	Q8IUN9	316 aa		13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	C7orf61	Q8IZ16	206 aa		13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	DYNLL2	Q96FJ2	89 aa		13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	DNAJC2	Q99543	621 aa	Known RBP	13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	APBA2	Q99767	749 aa		13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	C11orf49	Q9H6J7	331 aa		13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.53	□□□□□ -0.24
HNRNPC-231	ENST00000557336	CYP2D7	A0A087X1C5	515 aa		13.52	□□□□□ -0.25
HNRNPC-231	ENST00000557336		A0A1W2PPC1	479 aa		13.52	□□□□□ -0.25
HNRNPC-231	ENST00000557336	HOXC6	P09630	235 aa		13.52	□□□□□ -0.25
HNRNPC-231	ENST00000557336	ATP5J	P18859	108 aa		13.52	□□□□□ -0.25
HNRNPC-231	ENST00000557336	PDE3A	Q14432	1141 aa		13.52	□□□□□ -0.25
HNRNPC-231	ENST00000557336	GRB14	Q14449	540 aa		13.52	□□□□□ -0.25
HNRNPC-231	ENST00000557336	TRMT44	Q8IYL2	757 aa	Known RBP	13.52	□□□□□ -0.25
HNRNPC-231	ENST00000557336	TRPV1	Q8NER1	839 aa		13.52	□□□□□ -0.25
HNRNPC-231	ENST00000557336	NPLOC4	Q8TAT6	608 aa		13.52	□□□□□ -0.25
HNRNPC-231	ENST00000557336	LRCH3	Q96II8	777 aa		13.52	□□□□□ -0.25
HNRNPC-231	ENST00000557336	BOLA2	Q9H3K6	86 aa		13.52	□□□□□ -0.25
HNRNPC-231	ENST00000557336	CABP5	Q9NP86	173 aa		13.52	□□□□□ -0.25
HNRNPC-231	ENST00000557336	DDX19B	Q9UMR2	479 aa		13.52	□□□□□ -0.25
HNRNPC-231	ENST00000557336	RLF	Q13129	1914 aa		13.52	□□□□□ -0.25
HNRNPC-231	ENST00000557336	SLC15A5	A6NIM6	579 aa		13.51	□□□□□ -0.25
HNRNPC-231	ENST00000557336	RAB11FIP3	O75154	756 aa		13.51	□□□□□ -0.25
HNRNPC-231	ENST00000557336	IFIT2	P09913	472 aa	Known RBP	13.51	□□□□□ -0.25
HNRNPC-231	ENST00000557336	AKR1B1	P15121	316 aa		13.51	□□□□□ -0.25
HNRNPC-231	ENST00000557336	SYN1	P17600	705 aa		13.51	□□□□□ -0.25
HNRNPC-231	ENST00000557336	BMP8B	P34820	402 aa		13.51	□□□□□ -0.25
HNRNPC-231	ENST00000557336	HAUS7	Q99871	368 aa		13.51	□□□□□ -0.25
HNRNPC-231	ENST00000557336	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.51	□□□□□ -0.25
HNRNPC-231	ENST00000557336	PAG1	Q9NWQ8	432 aa		13.51	□□□□□ -0.25
HNRNPC-231	ENST00000557336	MBD4	O95243	580 aa		13.5	□□□□□ -0.25
HNRNPC-231	ENST00000557336	MS4A1	P11836	297 aa		13.5	□□□□□ -0.25
HNRNPC-231	ENST00000557336	CYP2C19	P33261	490 aa		13.5	□□□□□ -0.25
HNRNPC-231	ENST00000557336	LRRC26	Q2I0M4	334 aa		13.5	□□□□□ -0.25
HNRNPC-231	ENST00000557336	C12orf60	Q5U649	245 aa		13.5	□□□□□ -0.25
HNRNPC-231	ENST00000557336	BCL11A	Q9H165	835 aa		13.5	□□□□□ -0.25

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