RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 PTPRMP28827 1452 aa6.15□□□□□ -1.43
CHD8-212ENST00000557329 SPATA31D1Q6ZQQ2 1576 aa6.14□□□□□ -1.43
CHD8-212ENST00000557329 KIF21BO75037 1637 aa6.14□□□□□ -1.43
CHD8-212ENST00000557329 CUL7Q14999 1698 aa6.14□□□□□ -1.43
CHD8-212ENST00000557329 PPRC1Q5VV67 1664 aaKnown RBP6.14□□□□□ -1.43
CHD8-212ENST00000557329 FAM155AB1AL88 458 aaPredicted RBP6.14□□□□□ -1.43
CHD8-212ENST00000557329 CDK8P49336 464 aa6.14□□□□□ -1.43
CHD8-212ENST00000557329 JAG1P78504 1218 aa6.14□□□□□ -1.43
CHD8-212ENST00000557329 NKG7Q16617 165 aa6.14□□□□□ -1.43
CHD8-212ENST00000557329 TP53INP2Q8IXH6 220 aa6.14□□□□□ -1.43
CHD8-212ENST00000557329 MFSD4AQ8N468 514 aa6.14□□□□□ -1.43
CHD8-212ENST00000557329 FLCNQ8NFG4 579 aa6.14□□□□□ -1.43
CHD8-212ENST00000557329 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.14□□□□□ -1.43
CHD8-212ENST00000557329 TRIT1Q9H3H1 467 aaKnown RBP6.14□□□□□ -1.43
CHD8-212ENST00000557329 COPRSQ9NQ92 184 aa6.14□□□□□ -1.43
CHD8-212ENST00000557329 GMIPQ9P107 970 aa6.14□□□□□ -1.43
CHD8-212ENST00000557329 TNIKQ9UKE5 1360 aa6.14□□□□□ -1.43
CHD8-212ENST00000557329 ABCC2Q92887 1545 aa6.14□□□□□ -1.43
CHD8-212ENST00000557329 RAPGEF3O95398 923 aa6.13□□□□□ -1.43
CHD8-212ENST00000557329 RNF4P78317 190 aa6.13□□□□□ -1.43
CHD8-212ENST00000557329 LDLRAD1Q5T700 205 aa6.13□□□□□ -1.43
CHD8-212ENST00000557329 ANGEL2Q5VTE6 544 aaKnown RBP6.13□□□□□ -1.43
CHD8-212ENST00000557329 SHISA5Q8N114 240 aa6.13□□□□□ -1.43
CHD8-212ENST00000557329 BCL7CQ8WUZ0 217 aaPredicted RBP6.13□□□□□ -1.43
CHD8-212ENST00000557329 HEXIM2Q96MH2 286 aaKnown RBP6.13□□□□□ -1.43
CHD8-212ENST00000557329 ASPNQ9BXN1 380 aa6.13□□□□□ -1.43
CHD8-212ENST00000557329 KRTAP4-9Q9BYQ8 210 aa6.13□□□□□ -1.43
CHD8-212ENST00000557329 LMCD1Q9NZU5 365 aa6.13□□□□□ -1.43
CHD8-212ENST00000557329 ADAMTS1Q9UHI8 967 aa6.13□□□□□ -1.43
CHD8-212ENST00000557329 DDX41Q9UJV9 622 aaKnown RBP6.13□□□□□ -1.43
CHD8-212ENST00000557329 CD109Q6YHK3 1445 aa6.13□□□□□ -1.43
CHD8-212ENST00000557329 EPRSP07814 1512 aaKnown RBP6.13□□□□□ -1.43
CHD8-212ENST00000557329 ERICH3Q5RHP9 1530 aa6.13□□□□□ -1.43
CHD8-212ENST00000557329 GLI2P10070 1586 aa6.12□□□□□ -1.43
CHD8-212ENST00000557329 MCM4P33991 863 aa6.12□□□□□ -1.43
CHD8-212ENST00000557329 TNNI2P48788 182 aa6.12□□□□□ -1.43
CHD8-212ENST00000557329 AOC3Q16853 763 aa6.12□□□□□ -1.43
CHD8-212ENST00000557329 PHACTR4Q8IZ21 702 aa6.12□□□□□ -1.43
CHD8-212ENST00000557329 ABI1Q8IZP0 508 aa6.12□□□□□ -1.43
CHD8-212ENST00000557329 RUSC2Q8N2Y8 1516 aa6.12□□□□□ -1.43
CHD8-212ENST00000557329 RNF141Q8WVD5 230 aa6.12□□□□□ -1.43
CHD8-212ENST00000557329 PCDHB14Q9Y5E9 798 aa6.12□□□□□ -1.43
CHD8-212ENST00000557329 PCF11O94913 1555 aaKnown RBP6.11□□□□□ -1.43
CHD8-212ENST00000557329 KIAA0586Q9BVV6 1533 aa6.11□□□□□ -1.43
CHD8-212ENST00000557329 UACAQ9BZF9 1416 aa6.11□□□□□ -1.43
CHD8-212ENST00000557329 F6X3S4 739 aa6.11□□□□□ -1.43
CHD8-212ENST00000557329 BIN1O00499 593 aa6.11□□□□□ -1.43
CHD8-212ENST00000557329 RGS13O14921 159 aa6.11□□□□□ -1.43
CHD8-212ENST00000557329 RAG1P15918 1043 aa6.11□□□□□ -1.43
CHD8-212ENST00000557329 GBP1P32455 592 aa6.11□□□□□ -1.43
CHD8-212ENST00000557329 SEZ6Q53EL9 994 aa6.11□□□□□ -1.43
CHD8-212ENST00000557329 CDCP2Q5VXM1 449 aa6.11□□□□□ -1.43
CHD8-212ENST00000557329 INTS3Q68E01 1043 aaKnown RBP6.11□□□□□ -1.43
CHD8-212ENST00000557329 UBE3DQ7Z6J8 389 aa6.11□□□□□ -1.43
CHD8-212ENST00000557329 PLD6Q8N2A8 252 aaKnown RBP6.11□□□□□ -1.43
CHD8-212ENST00000557329 TGIF2Q9GZN2 237 aa6.11□□□□□ -1.43
CHD8-212ENST00000557329 BRMS1Q9HCU9 246 aa6.11□□□□□ -1.43
CHD8-212ENST00000557329 POLR3KQ9Y2Y1 108 aaPredicted RBP6.11□□□□□ -1.43
CHD8-212ENST00000557329 MEIS3P2A8K0S8 358 aa6.1□□□□□ -1.43
CHD8-212ENST00000557329 TLR3O15455 904 aaKnown RBP6.1□□□□□ -1.43
CHD8-212ENST00000557329 GRIN3BO60391 1043 aa6.1□□□□□ -1.43
CHD8-212ENST00000557329 ITIH2P19823 946 aa6.1□□□□□ -1.43
CHD8-212ENST00000557329 OGFOD2Q6N063 350 aa6.1□□□□□ -1.43
CHD8-212ENST00000557329 CBLL1Q75N03 491 aa6.1□□□□□ -1.43
CHD8-212ENST00000557329 TMPRSS7Q7RTY8 843 aa6.1□□□□□ -1.43
CHD8-212ENST00000557329 SPACA3Q8IXA5 215 aa6.1□□□□□ -1.43
CHD8-212ENST00000557329 FAM9AQ8IZU1 332 aaPredicted RBP6.1□□□□□ -1.43
CHD8-212ENST00000557329 POU5F2Q8N7G0 328 aa6.1□□□□□ -1.43
CHD8-212ENST00000557329 FAM181AQ8N9Y4 354 aa6.1□□□□□ -1.43
CHD8-212ENST00000557329 DHRS1Q96LJ7 313 aa6.1□□□□□ -1.43
CHD8-212ENST00000557329 ASCC2Q9H1I8 757 aaPredicted RBP6.1□□□□□ -1.43
CHD8-212ENST00000557329 KLHL3Q9UH77 587 aa6.1□□□□□ -1.43
CHD8-212ENST00000557329 CORINQ9Y5Q5 1042 aa6.1□□□□□ -1.43
CHD8-212ENST00000557329 CAPN6Q9Y6Q1 641 aa6.1□□□□□ -1.43
CHD8-212ENST00000557329 SLC22A31A6NKX4 558 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 FUT4P22083 530 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 GNL2Q13823 731 aaKnown RBP6.09□□□□□ -1.43
CHD8-212ENST00000557329 NKPD1Q17RQ9 610 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 SLC23A3Q6PIS1 610 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 CDH24Q86UP0 819 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 VPS37DQ86XT2 251 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 TAB3Q8N5C8 712 aaPredicted RBP6.09□□□□□ -1.43
CHD8-212ENST00000557329 OR6P1Q8NGX9 317 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 DNAJB8Q8NHS0 232 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 ENOX1Q8TC92 643 aaKnown RBP6.09□□□□□ -1.43
CHD8-212ENST00000557329 XAGE3Q8WTP9 111 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 TMEM40Q8WWA1 233 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 ASIC4Q96FT7 647 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 CNNM2Q9H8M5 875 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 PAK6Q9NQU5 681 aaPredicted RBP6.09□□□□□ -1.43
CHD8-212ENST00000557329 GPATCH2Q9NW75 528 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 PODXL2Q9NZ53 605 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 UBP1Q9NZI7 540 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 STRIP2Q9ULQ0 834 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 PLAGL2Q9UPG8 496 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 MAP3K4Q9Y6R4 1608 aa6.09□□□□□ -1.43
CHD8-212ENST00000557329 PITPNM2Q9BZ72 1349 aa6.08□□□□□ -1.44
CHD8-212ENST00000557329 CBX7O95931 251 aa6.08□□□□□ -1.44
CHD8-212ENST00000557329 JUNBP17275 347 aaPredicted RBP6.08□□□□□ -1.44
CHD8-212ENST00000557329 PLCL1Q15111 1095 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms