RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 ARPP21Q9UBL0 812 aaPredicted RBP25.76■■□□□ 1.71
RCCD1-208ENST00000557266 COL24A1Q17RW2 1714 aa25.76■■□□□ 1.71
RCCD1-208ENST00000557266 CCP110O43303 1012 aa25.76■■□□□ 1.71
RCCD1-208ENST00000557266 RPS6KA4O75676 772 aa25.76■■□□□ 1.71
RCCD1-208ENST00000557266 TUBB4AP04350 444 aa25.76■■□□□ 1.71
RCCD1-208ENST00000557266 ERCC5P28715 1186 aaPredicted RBP25.76■■□□□ 1.71
RCCD1-208ENST00000557266 SBK1Q52WX2 424 aa25.76■■□□□ 1.71
RCCD1-208ENST00000557266 JAG2Q9Y219 1238 aa25.76■■□□□ 1.71
RCCD1-208ENST00000557266 KIAA1551Q9HCM1 1747 aa25.75■■□□□ 1.71
RCCD1-208ENST00000557266 CDK11BP21127 795 aaKnown RBP25.75■■□□□ 1.71
RCCD1-208ENST00000557266 AFMP43652 599 aa25.75■■□□□ 1.71
RCCD1-208ENST00000557266 RC3H1Q5TC82 1133 aaKnown RBP25.75■■□□□ 1.71
RCCD1-208ENST00000557266 FBXO41Q8TF61 875 aa25.75■■□□□ 1.71
RCCD1-208ENST00000557266 MYH13Q9UKX3 1938 aa25.75■■□□□ 1.71
RCCD1-208ENST00000557266 IRS2Q9Y4H2 1338 aa25.75■■□□□ 1.71
RCCD1-208ENST00000557266 SPDYE4A6NLX3 237 aa25.75■■□□□ 1.71
RCCD1-208ENST00000557266 CASP1P29466 404 aa25.75■■□□□ 1.71
RCCD1-208ENST00000557266 CCDC93Q567U6 631 aa25.75■■□□□ 1.71
RCCD1-208ENST00000557266 SMAP1Q8IYB5 467 aaPredicted RBP25.75■■□□□ 1.71
RCCD1-208ENST00000557266 SCG2P13521 617 aa25.74■■□□□ 1.71
RCCD1-208ENST00000557266 TM4SF1P30408 202 aa25.74■■□□□ 1.71
RCCD1-208ENST00000557266 ETF1P62495 437 aaKnown RBP25.74■■□□□ 1.71
RCCD1-208ENST00000557266 ATP2C1P98194 919 aaPredicted RBP25.74■■□□□ 1.71
RCCD1-208ENST00000557266 SPECC1LQ69YQ0 1117 aa25.74■■□□□ 1.71
RCCD1-208ENST00000557266 MAST2Q6P0Q8 1798 aa25.74■■□□□ 1.71
RCCD1-208ENST00000557266 VEGFAP15692 232 aaPredicted RBP25.73■■□□□ 1.71
RCCD1-208ENST00000557266 RCSD1Q6JBY9 416 aa25.73■■□□□ 1.71
RCCD1-208ENST00000557266 KRT27Q7Z3Y8 459 aa25.73■■□□□ 1.71
RCCD1-208ENST00000557266 FCHSD1Q86WN1 690 aa25.73■■□□□ 1.71
RCCD1-208ENST00000557266 HOMER1Q86YM7 354 aa25.73■■□□□ 1.71
RCCD1-208ENST00000557266 REXO1L1PQ8IX06 675 aa25.73■■□□□ 1.71
RCCD1-208ENST00000557266 CCDC34Q96HJ3 373 aa25.73■■□□□ 1.71
RCCD1-208ENST00000557266 ZMYND15Q9H091 742 aa25.73■■□□□ 1.71
RCCD1-208ENST00000557266 GNPATO15228 680 aa25.73■■□□□ 1.71
RCCD1-208ENST00000557266 CD44P16070 742 aaKnown RBP25.73■■□□□ 1.71
RCCD1-208ENST00000557266 DPYDQ12882 1025 aa25.73■■□□□ 1.71
RCCD1-208ENST00000557266 PTGDRQ13258 359 aa25.73■■□□□ 1.71
RCCD1-208ENST00000557266 TRIM65Q6PJ69 517 aa25.73■■□□□ 1.71
RCCD1-208ENST00000557266 VWA3AA6NCI4 1184 aa25.72■■□□□ 1.71
RCCD1-208ENST00000557266 TSPY2A6NKD2 308 aa25.72■■□□□ 1.71
RCCD1-208ENST00000557266 ADAMTS3O15072 1205 aa25.72■■□□□ 1.71
RCCD1-208ENST00000557266 ARHGAP6O43182 974 aa25.72■■□□□ 1.71
RCCD1-208ENST00000557266 ZPR1O75312 459 aa25.72■■□□□ 1.71
RCCD1-208ENST00000557266 CUL4BQ13620 913 aa25.72■■□□□ 1.71
RCCD1-208ENST00000557266 ELF2Q15723 593 aa25.72■■□□□ 1.71
RCCD1-208ENST00000557266 PFKFB3Q16875 520 aaPredicted RBP25.72■■□□□ 1.71
RCCD1-208ENST00000557266 TPTE2Q6XPS3 522 aa25.72■■□□□ 1.71
RCCD1-208ENST00000557266 AMIGO3Q86WK7 504 aa25.72■■□□□ 1.71
RCCD1-208ENST00000557266 TC2NQ8N9U0 490 aa25.72■■□□□ 1.71
RCCD1-208ENST00000557266 FEZ1Q99689 392 aa25.72■■□□□ 1.71
RCCD1-208ENST00000557266 CT47A1Q5JQC4 288 aaPredicted RBP25.72■■□□□ 1.71
RCCD1-208ENST00000557266 PIK3AP1Q6ZUJ8 805 aa25.72■■□□□ 1.71
RCCD1-208ENST00000557266 PHLPP2Q6ZVD8 1323 aa25.72■■□□□ 1.71
RCCD1-208ENST00000557266 USP17L8P0C7I0 530 aa25.71■■□□□ 1.71
RCCD1-208ENST00000557266 NLRP5P59047 1200 aa25.71■■□□□ 1.71
RCCD1-208ENST00000557266 NR1I3Q14994 352 aa25.71■■□□□ 1.71
RCCD1-208ENST00000557266 MCM9Q9NXL9 1143 aa25.71■■□□□ 1.71
RCCD1-208ENST00000557266 TAF1LQ8IZX4 1826 aa25.71■■□□□ 1.71
RCCD1-208ENST00000557266 A0A1B0GTH6 734 aa25.7■■□□□ 1.71
RCCD1-208ENST00000557266 FANCGO15287 622 aa25.7■■□□□ 1.71
RCCD1-208ENST00000557266 SLC4A8Q2Y0W8 1093 aa25.7■■□□□ 1.71
RCCD1-208ENST00000557266 TMED8Q6PL24 325 aaPredicted RBP25.7■■□□□ 1.71
RCCD1-208ENST00000557266 FAM196AQ6ZSG2 479 aa25.7■■□□□ 1.71
RCCD1-208ENST00000557266 APTXQ7Z2E3 356 aaKnown RBP25.7■■□□□ 1.71
RCCD1-208ENST00000557266 DZIP1Q86YF9 867 aaKnown RBP25.7■■□□□ 1.71
RCCD1-208ENST00000557266 GSDMAQ96QA5 445 aa25.7■■□□□ 1.71
RCCD1-208ENST00000557266 BAG1Q99933 345 aaPredicted RBP25.7■■□□□ 1.71
RCCD1-208ENST00000557266 DNAI1Q9UI46 699 aa25.7■■□□□ 1.71
RCCD1-208ENST00000557266 SLC51AQ86UW1 340 aa25.7■■□□□ 1.7
RCCD1-208ENST00000557266 LRRN4CLQ8ND94 238 aa25.7■■□□□ 1.7
RCCD1-208ENST00000557266 MKRN1Q9UHC7 482 aaKnown RBP25.7■■□□□ 1.7
RCCD1-208ENST00000557266 SYNRGQ9UMZ2 1314 aa25.69■■□□□ 1.7
RCCD1-208ENST00000557266 TRAPPC10P48553 1259 aa25.69■■□□□ 1.7
RCCD1-208ENST00000557266 ADKP55263 362 aaKnown RBP25.69■■□□□ 1.7
RCCD1-208ENST00000557266 E2F4Q16254 413 aa25.69■■□□□ 1.7
RCCD1-208ENST00000557266 KMT5BQ4FZB7 885 aa25.69■■□□□ 1.7
RCCD1-208ENST00000557266 SPATA1Q5VX52 437 aa25.69■■□□□ 1.7
RCCD1-208ENST00000557266 ZNF397Q8NF99 534 aaPredicted RBP25.69■■□□□ 1.7
RCCD1-208ENST00000557266 PRDM10Q9NQV6 1147 aa25.69■■□□□ 1.7
RCCD1-208ENST00000557266 PPP2R2CQ9Y2T4 447 aa25.69■■□□□ 1.7
RCCD1-208ENST00000557266 BAZ2BQ9UIF8 2168 aaKnown RBP25.69■■□□□ 1.7
RCCD1-208ENST00000557266 ZBTB22O15209 634 aa25.69■■□□□ 1.7
RCCD1-208ENST00000557266 KLHL10Q6JEL2 608 aa25.69■■□□□ 1.7
RCCD1-208ENST00000557266 XDHP47989 1333 aa25.68■■□□□ 1.7
RCCD1-208ENST00000557266 ZSCAN12O43309 604 aa25.68■■□□□ 1.7
RCCD1-208ENST00000557266 STX10O60499 249 aa25.68■■□□□ 1.7
RCCD1-208ENST00000557266 IL17AQ16552 155 aa25.68■■□□□ 1.7
RCCD1-208ENST00000557266 SPTY2D1Q68D10 685 aaPredicted RBP25.68■■□□□ 1.7
RCCD1-208ENST00000557266 SMYD4Q8IYR2 804 aaPredicted RBP25.68■■□□□ 1.7
RCCD1-208ENST00000557266 IL17RBQ9NRM6 502 aa25.68■■□□□ 1.7
RCCD1-208ENST00000557266 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.68■■□□□ 1.74e-7■■□□□ 13.7
RCCD1-208ENST00000557266 PPP1R3GB7ZBB8 358 aa25.67■■□□□ 1.7
RCCD1-208ENST00000557266 KIF5BP33176 963 aa25.67■■□□□ 1.7
RCCD1-208ENST00000557266 STX17P56962 302 aa25.67■■□□□ 1.7
RCCD1-208ENST00000557266 C12orf60Q5U649 245 aa25.67■■□□□ 1.7
RCCD1-208ENST00000557266 MCM7P33993 719 aa25.67■■□□□ 1.7
RCCD1-208ENST00000557266 TFAP4Q01664 338 aa25.67■■□□□ 1.7
RCCD1-208ENST00000557266 CDKAL1Q5VV42 579 aa25.67■■□□□ 1.7
RCCD1-208ENST00000557266 ARHGEF1Q92888 912 aaKnown RBP25.67■■□□□ 1.7
RCCD1-208ENST00000557266 KAT14Q9H8E8 782 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms