RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 TRIM47Q96LD4 638 aa17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 BIN2Q9UBW5 565 aaPredicted RBP17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 SYNRGQ9UMZ2 1314 aa17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 WNT7AO00755 349 aa17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 SLU7O95391 586 aaKnown RBP17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 TNNI2P48788 182 aa17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 PLCD1P51178 756 aa17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 TMTC3Q6ZXV5 915 aa17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 ZC3H12CQ9C0D7 883 aaKnown RBP17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 ATP8A2Q9NTI2 1148 aa17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 ARPP21Q9UBL0 812 aaPredicted RBP17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 ZNF142P52746 1687 aaPredicted RBP17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 TXKP42681 527 aa17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 AMIGO3Q86WK7 504 aa17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 BLIDQ8IZY5 108 aa17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 CCDC47Q96A33 483 aaKnown RBP17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 TCP11L1Q9NUJ3 509 aa17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 ZSCAN12O43309 604 aa17.37■□□□□ 0.37
TMEM55B-207ENST00000557041 CASQ1P31415 396 aa17.37■□□□□ 0.37
TMEM55B-207ENST00000557041 TEX33O43247 280 aa17.37■□□□□ 0.37
TMEM55B-207ENST00000557041 TROAPQ12815 778 aa17.37■□□□□ 0.37
TMEM55B-207ENST00000557041 CARD6Q9BX69 1037 aa17.37■□□□□ 0.37
TMEM55B-207ENST00000557041 TANGO6Q9C0B7 1094 aa17.37■□□□□ 0.37
TMEM55B-207ENST00000557041 CDC25BP30305 580 aa17.37■□□□□ 0.37
TMEM55B-207ENST00000557041 ZNF710Q8N1W2 664 aa17.37■□□□□ 0.37
TMEM55B-207ENST00000557041 TIGD1Q96MW7 591 aa17.37■□□□□ 0.37
TMEM55B-207ENST00000557041 BRIP1Q9BX63 1249 aa17.37■□□□□ 0.37
TMEM55B-207ENST00000557041 IMPACTQ9P2X3 320 aa17.37■□□□□ 0.37
TMEM55B-207ENST00000557041 ASIC1P78348 528 aa17.36■□□□□ 0.37
TMEM55B-207ENST00000557041 GSTO1P78417 241 aa17.36■□□□□ 0.37
TMEM55B-207ENST00000557041 KIF4BQ2VIQ3 1234 aa17.36■□□□□ 0.37
TMEM55B-207ENST00000557041 SPECC1LQ69YQ0 1117 aa17.36■□□□□ 0.37
TMEM55B-207ENST00000557041 PRPF3O43395 683 aaKnown RBP17.36■□□□□ 0.37
TMEM55B-207ENST00000557041 CALML3P27482 149 aa17.36■□□□□ 0.37
TMEM55B-207ENST00000557041 RAD51AP2Q09MP3 1159 aa17.36■□□□□ 0.37
TMEM55B-207ENST00000557041 NCAPHQ15003 741 aa17.36■□□□□ 0.37
TMEM55B-207ENST00000557041 E4F1Q66K89 784 aaPredicted RBP17.36■□□□□ 0.37
TMEM55B-207ENST00000557041 PAGE5Q96GU1 130 aa17.36■□□□□ 0.37
TMEM55B-207ENST00000557041 MXD3Q9BW11 206 aa17.36■□□□□ 0.37
TMEM55B-207ENST00000557041 ZNF287Q9HBT7 754 aa17.36■□□□□ 0.37
TMEM55B-207ENST00000557041 SERPINB2P05120 415 aa17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 PARP1P09874 1014 aaKnown RBP17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 CACNB3P54284 484 aa17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 FBXO33Q7Z6M2 555 aa17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 FBXL16Q8N461 479 aa17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 PUF60Q9UHX1 559 aaKnown RBP17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 FAM196BA6NMK8 535 aa17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 UBXN1Q04323 297 aa17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 STIM1Q13586 685 aa17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 CUL4BQ13620 913 aa17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 SEC23AQ15436 765 aa17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 CCDC94Q9BW85 323 aaPredicted RBP17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 GDAQ9Y2T3 454 aa17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 PHRF1Q9P1Y6 1649 aaKnown RBP17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 IKBKBO14920 756 aa17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 IPO7O95373 1038 aaKnown RBP17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 TECP42680 631 aa17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 DYMQ7RTS9 669 aa17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 EPC1Q9H2F5 836 aa17.35■□□□□ 0.37
TMEM55B-207ENST00000557041 NCBP1Q09161 790 aaKnown RBP17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 FAM170AA1A519 330 aa17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 SMCO2A6NFE2 343 aa17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 CCP110O43303 1012 aa17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 BMP6P22004 513 aa17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 DNA2P51530 1060 aa17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 NAP1L1P55209 391 aaKnown RBP17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 MTF1Q14872 753 aa17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 ZNF384Q8TF68 577 aa17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 IRX2Q9BZI1 471 aaPredicted RBP17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 SLFN14P0C7P3 912 aa17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 SLURP2P0DP57 97 aa17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 PKN1Q16512 942 aa17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 COA7Q96BR5 231 aa17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 HPSEQ9Y251 543 aa17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 STK36Q9NRP7 1315 aa17.34■□□□□ 0.37
TMEM55B-207ENST00000557041 SLC16A2P36021 539 aa17.33■□□□□ 0.37
TMEM55B-207ENST00000557041 MTIF2P46199 727 aaKnown RBP17.33■□□□□ 0.37
TMEM55B-207ENST00000557041 UBE2Q2Q8WVN8 375 aa17.33■□□□□ 0.37
TMEM55B-207ENST00000557041 FERMT2Q96AC1 680 aa17.33■□□□□ 0.37
TMEM55B-207ENST00000557041 A0A087X0B3 334 aa17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 AKR1B15C9JRZ8 316 aaPredicted RBP17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 KIF2AO00139 706 aaPredicted RBP17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 POLR3GO15318 223 aaPredicted RBP17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 BMP15O95972 392 aa17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 GPSM2P81274 684 aa17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 SEPT12Q8IYM1 358 aa17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 NELFBQ8WX92 580 aa17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 RRP36Q96EU6 259 aaKnown RBP17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 TTF2Q9UNY4 1162 aaKnown RBP17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 SOWAHDA6NJG2 315 aa17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 DDAH1O94760 285 aa17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 KRT18P05783 430 aaKnown RBP17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 GRAPQ13588 217 aa17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 KIAA0825Q8IV33 1275 aa17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 GRAPLQ8TC17 118 aaPredicted RBP17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 TUBE1Q9UJT0 475 aa17.33■□□□□ 0.36
TMEM55B-207ENST00000557041 GNAQP50148 359 aa17.32■□□□□ 0.36
TMEM55B-207ENST00000557041 PPP2R5BQ15173 497 aa17.32■□□□□ 0.36
TMEM55B-207ENST00000557041 TMEM47Q9BQJ4 181 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms