RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 EXOSC9Q06265 439 aaKnown RBP15.54■□□□□ 0.08
PSEN1-220ENST00000557037 PPP2R2DQ66LE6 453 aa15.54■□□□□ 0.08
PSEN1-220ENST00000557037 CCDC102BQ68D86 513 aa15.54■□□□□ 0.08
PSEN1-220ENST00000557037 PSRC1Q6PGN9 363 aaPredicted RBP15.54■□□□□ 0.08
PSEN1-220ENST00000557037 CATSPERGQ6ZRH7 1159 aa15.54■□□□□ 0.08
PSEN1-220ENST00000557037 ERICH6Q7L0X2 663 aa15.54■□□□□ 0.08
PSEN1-220ENST00000557037 LENG1Q96BZ8 264 aaPredicted RBP15.54■□□□□ 0.08
PSEN1-220ENST00000557037 SIPA1L1O43166 1804 aa15.54■□□□□ 0.08
PSEN1-220ENST00000557037 PRR33A8MZF0 331 aa15.53■□□□□ 0.08
PSEN1-220ENST00000557037 KRT40Q6A162 431 aa15.53■□□□□ 0.08
PSEN1-220ENST00000557037 WWC1Q8IX03 1113 aa15.53■□□□□ 0.08
PSEN1-220ENST00000557037 CRACR2BQ8N4Y2 399 aaPredicted RBP15.53■□□□□ 0.08
PSEN1-220ENST00000557037 MOV10L1Q9BXT6 1211 aaKnown RBP15.53■□□□□ 0.08
PSEN1-220ENST00000557037 TRIM34Q9BYJ4 488 aa15.53■□□□□ 0.08
PSEN1-220ENST00000557037 PPP1R12CQ9BZL4 782 aa15.53■□□□□ 0.08
PSEN1-220ENST00000557037 STARD7Q9NQZ5 370 aa15.53■□□□□ 0.08
PSEN1-220ENST00000557037 SPDYE16A6NNV3 312 aaPredicted RBP15.52■□□□□ 0.08
PSEN1-220ENST00000557037 TMEM199Q8N511 208 aa15.52■□□□□ 0.08
PSEN1-220ENST00000557037 SH3RF3Q8TEJ3 882 aaPredicted RBP15.52■□□□□ 0.08
PSEN1-220ENST00000557037 FBXL18Q96ME1 805 aa15.52■□□□□ 0.08
PSEN1-220ENST00000557037 CEP126Q9P2H0 1117 aa15.52■□□□□ 0.08
PSEN1-220ENST00000557037 COG5Q9UP83 839 aa15.52■□□□□ 0.08
PSEN1-220ENST00000557037 MTCH2Q9Y6C9 303 aa15.52■□□□□ 0.08
PSEN1-220ENST00000557037 SPTBN4Q9H254 2564 aa15.52■□□□□ 0.07
PSEN1-220ENST00000557037 GTPBP6O43824 516 aaPredicted RBP15.51■□□□□ 0.07
PSEN1-220ENST00000557037 GH2P01242 217 aa15.51■□□□□ 0.07
PSEN1-220ENST00000557037 TAL1P17542 331 aaPredicted RBP15.51■□□□□ 0.07
PSEN1-220ENST00000557037 VCAM1P19320 739 aa15.51■□□□□ 0.07
PSEN1-220ENST00000557037 ACLYP53396 1101 aa15.51■□□□□ 0.07
PSEN1-220ENST00000557037 C12orf42Q96LP6 360 aa15.51■□□□□ 0.07
PSEN1-220ENST00000557037 CERS4Q9HA82 394 aa15.51■□□□□ 0.07
PSEN1-220ENST00000557037 ZNF521Q96K83 1311 aa15.5■□□□□ 0.07
PSEN1-220ENST00000557037 STRNO43815 780 aa15.5■□□□□ 0.07
PSEN1-220ENST00000557037 MAP4K4O95819 1239 aaPredicted RBP15.5■□□□□ 0.07
PSEN1-220ENST00000557037 LDHCP07864 332 aa15.5■□□□□ 0.07
PSEN1-220ENST00000557037 ERCC3P19447 782 aa15.5■□□□□ 0.07
PSEN1-220ENST00000557037 CYP2C18P33260 490 aa15.5■□□□□ 0.07
PSEN1-220ENST00000557037 GSTO1P78417 241 aa15.5■□□□□ 0.07
PSEN1-220ENST00000557037 LBX2Q6XYB7 198 aa15.5■□□□□ 0.07
PSEN1-220ENST00000557037 OTOP2Q7RTS6 562 aa15.5■□□□□ 0.07
PSEN1-220ENST00000557037 MAPKAPK5Q8IW41 473 aa15.5■□□□□ 0.07
PSEN1-220ENST00000557037 HLA-CQ95604 372 aa15.5■□□□□ 0.07
PSEN1-220ENST00000557037 MAML3Q96JK9 1138 aa15.5■□□□□ 0.07
PSEN1-220ENST00000557037 IL23AQ9NPF7 189 aa15.5■□□□□ 0.07
PSEN1-220ENST00000557037 GINM1Q9NU53 330 aa15.5■□□□□ 0.07
PSEN1-220ENST00000557037 SLC5A4Q9NY91 659 aa15.5■□□□□ 0.07
PSEN1-220ENST00000557037 FGBP02675 491 aa15.49■□□□□ 0.07
PSEN1-220ENST00000557037 TBC1D9Q6ZT07 1266 aa15.49■□□□□ 0.07
PSEN1-220ENST00000557037 ACER1Q8TDN7 264 aa15.49■□□□□ 0.07
PSEN1-220ENST00000557037 NSUN4Q96CB9 384 aaKnown RBP15.49■□□□□ 0.07
PSEN1-220ENST00000557037 MTIF3Q9H2K0 278 aaKnown RBP15.49■□□□□ 0.07
PSEN1-220ENST00000557037 DHX36Q9H2U1 1008 aaKnown RBP15.49■□□□□ 0.07
PSEN1-220ENST00000557037 RPAP3Q9H6T3 665 aaPredicted RBP15.49■□□□□ 0.07
PSEN1-220ENST00000557037 RAI14Q9P0K7 980 aa15.49■□□□□ 0.07
PSEN1-220ENST00000557037 PALD1Q9ULE6 856 aa15.49■□□□□ 0.07
PSEN1-220ENST00000557037 ZNF236Q9UL36 1845 aa15.49■□□□□ 0.07
PSEN1-220ENST00000557037 IL16Q14005 1332 aa15.48■□□□□ 0.07
PSEN1-220ENST00000557037 CSPP1Q1MSJ5 1256 aa15.48■□□□□ 0.07
PSEN1-220ENST00000557037 FOXP4Q8IVH2 680 aaPredicted RBP15.48■□□□□ 0.07
PSEN1-220ENST00000557037 TGFBRAP1Q8WUH2 860 aa15.48■□□□□ 0.07
PSEN1-220ENST00000557037 NUP133Q8WUM0 1156 aa15.48■□□□□ 0.07
PSEN1-220ENST00000557037 VTI1AQ96AJ9 217 aa15.48■□□□□ 0.07
PSEN1-220ENST00000557037 TSEN34Q9BSV6 310 aaKnown RBP15.48■□□□□ 0.07
PSEN1-220ENST00000557037 SPATC1LQ9H0A9 340 aa15.48■□□□□ 0.07
PSEN1-220ENST00000557037 SAP30BPQ9UHR5 308 aaKnown RBP15.48■□□□□ 0.07
PSEN1-220ENST00000557037 PDS5AQ29RF7 1337 aaKnown RBP15.47■□□□□ 0.07
PSEN1-220ENST00000557037 EPOPA6NHQ4 379 aa15.47■□□□□ 0.07
PSEN1-220ENST00000557037 ADAMTS4O75173 837 aa15.47■□□□□ 0.07
PSEN1-220ENST00000557037 USP14P54578 494 aa15.47■□□□□ 0.07
PSEN1-220ENST00000557037 TIMM10P62072 90 aa15.47■□□□□ 0.07
PSEN1-220ENST00000557037 PLS1Q14651 629 aa15.47■□□□□ 0.07
PSEN1-220ENST00000557037 KCNA10Q16322 511 aa15.47■□□□□ 0.07
PSEN1-220ENST00000557037 CCDC27Q2M243 656 aa15.47■□□□□ 0.07
PSEN1-220ENST00000557037 PI16Q6UXB8 463 aa15.47■□□□□ 0.07
PSEN1-220ENST00000557037 NCAPG2Q86XI2 1143 aa15.47■□□□□ 0.07
PSEN1-220ENST00000557037 CDCA7LQ96GN5 454 aa15.47■□□□□ 0.07
PSEN1-220ENST00000557037 POU3F3P20264 500 aaPredicted RBP15.46■□□□□ 0.07
PSEN1-220ENST00000557037 RAB3GAP1Q15042 981 aa15.46■□□□□ 0.07
PSEN1-220ENST00000557037 METTL16Q86W50 562 aaKnown RBP15.46■□□□□ 0.07
PSEN1-220ENST00000557037 SHCBP1Q8NEM2 672 aa15.46■□□□□ 0.07
PSEN1-220ENST00000557037 PHOX2BQ99453 314 aa15.46■□□□□ 0.07
PSEN1-220ENST00000557037 PCDHA11Q9Y5I1 949 aa15.46■□□□□ 0.07
PSEN1-220ENST00000557037 SLC4A7Q9Y6M7 1214 aa15.46■□□□□ 0.07
PSEN1-220ENST00000557037 ZFHX2Q9C0A1 2572 aaPredicted RBP15.46■□□□□ 0.07
PSEN1-220ENST00000557037 SYNRGQ9UMZ2 1314 aa15.45■□□□□ 0.06
PSEN1-220ENST00000557037 MYADML2A6NDP7 307 aa15.45■□□□□ 0.06
PSEN1-220ENST00000557037 CIAO1O76071 339 aa15.45■□□□□ 0.06
PSEN1-220ENST00000557037 CDK7P50613 346 aa15.45■□□□□ 0.06
PSEN1-220ENST00000557037 IRX5P78411 483 aaPredicted RBP15.45■□□□□ 0.06
PSEN1-220ENST00000557037 GJD3Q8N144 294 aa15.45■□□□□ 0.06
PSEN1-220ENST00000557037 ANKS1AQ92625 1134 aa15.45■□□□□ 0.06
PSEN1-220ENST00000557037 NOL10Q9BSC4 688 aaKnown RBP15.45■□□□□ 0.06
PSEN1-220ENST00000557037 KIAA1683Q9H0B3 1180 aa15.45■□□□□ 0.06
PSEN1-220ENST00000557037 USP44Q9H0E7 712 aa15.45■□□□□ 0.06
PSEN1-220ENST00000557037 AATFQ9NY61 560 aaKnown RBP eCLIP15.45■□□□□ 0.06
PSEN1-220ENST00000557037 NRBP1Q9UHY1 535 aa15.45■□□□□ 0.06
PSEN1-220ENST00000557037 WDFY4Q6ZS81 3184 aa15.45■□□□□ 0.06
PSEN1-220ENST00000557037 ZNF318Q5VUA4 2279 aa15.45■□□□□ 0.06
PSEN1-220ENST00000557037 ZNFX1Q9P2E3 1918 aaKnown RBP15.45■□□□□ 0.06
PSEN1-220ENST00000557037 FLT1P17948 1338 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms