RNA–Protein interactions for RNA: ENST00000556996.1

CCDC175-205, Transcript of coiled-coil domain containing 175, humanhuman

TSL 4

Gene CCDC175, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-205ENST00000556996 MBNL3Q9NUK0 354 aaKnown RBP11.18□□□□□ -0.62
CCDC175-205ENST00000556996 ZSWIM5Q9P217 1185 aa11.18□□□□□ -0.62
CCDC175-205ENST00000556996 FAM86C2PA6NEL3 165 aa11.17□□□□□ -0.62
CCDC175-205ENST00000556996 TNFRSF10CO14798 259 aa11.17□□□□□ -0.62
CCDC175-205ENST00000556996 SOX9P48436 509 aa11.17□□□□□ -0.62
CCDC175-205ENST00000556996 IRAK1P51617 712 aa11.17□□□□□ -0.62
CCDC175-205ENST00000556996 FBXW10Q5XX13 1052 aa11.17□□□□□ -0.62
CCDC175-205ENST00000556996 ZNF512BQ96KM6 892 aaPredicted RBP11.17□□□□□ -0.62
CCDC175-205ENST00000556996 RNASE1P07998 156 aaKnown RBP11.16□□□□□ -0.62
CCDC175-205ENST00000556996 ERCC5P28715 1186 aaPredicted RBP11.16□□□□□ -0.62
CCDC175-205ENST00000556996 ZP2Q05996 745 aa11.16□□□□□ -0.62
CCDC175-205ENST00000556996 LRRFIP1Q32MZ4 808 aaKnown RBP11.16□□□□□ -0.62
CCDC175-205ENST00000556996 RUFY4Q6ZNE9 571 aa11.16□□□□□ -0.62
CCDC175-205ENST00000556996 THAP5Q7Z6K1 395 aa11.16□□□□□ -0.62
CCDC175-205ENST00000556996 TMEM192Q8IY95 271 aa11.16□□□□□ -0.62
CCDC175-205ENST00000556996 CARS2Q9HA77 564 aaKnown RBP11.16□□□□□ -0.62
CCDC175-205ENST00000556996 SHISA3A0PJX4 238 aa11.15□□□□□ -0.62
CCDC175-205ENST00000556996 LSRQ86X29 649 aaPredicted RBP11.15□□□□□ -0.62
CCDC175-205ENST00000556996 SRFP11831 508 aa11.14□□□□□ -0.63
CCDC175-205ENST00000556996 IMPDH2P12268 514 aa11.14□□□□□ -0.63
CCDC175-205ENST00000556996 SLC6A18Q96N87 628 aa11.14□□□□□ -0.63
CCDC175-205ENST00000556996 GPR62Q9BZJ7 368 aa11.14□□□□□ -0.63
CCDC175-205ENST00000556996 INPP5FQ9Y2H2 1132 aa11.14□□□□□ -0.63
CCDC175-205ENST00000556996 NASPP49321 788 aaPredicted RBP11.13□□□□□ -0.63
CCDC175-205ENST00000556996 NBPF12Q5TAG4 269 aaPredicted RBP11.13□□□□□ -0.63
CCDC175-205ENST00000556996 MCTP1Q6DN14 999 aa11.13□□□□□ -0.63
CCDC175-205ENST00000556996 PI4K2BQ8TCG2 481 aa11.13□□□□□ -0.63
CCDC175-205ENST00000556996 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCDC175-205ENST00000556996 KCNH3Q9ULD8 1083 aa11.13□□□□□ -0.63
CCDC175-205ENST00000556996 ESR1P03372 595 aa11.12□□□□□ -0.63
CCDC175-205ENST00000556996 SNW1Q13573 536 aaKnown RBP11.12□□□□□ -0.63
CCDC175-205ENST00000556996 COL9A2Q14055 689 aaPredicted RBP11.12□□□□□ -0.63
CCDC175-205ENST00000556996 ZYXQ15942 572 aaKnown RBP11.12□□□□□ -0.63
CCDC175-205ENST00000556996 GAB4Q2WGN9 574 aa11.12□□□□□ -0.63
CCDC175-205ENST00000556996 RBBP8NLQ8NC74 664 aaPredicted RBP11.12□□□□□ -0.63
CCDC175-205ENST00000556996 LRRN4CLQ8ND94 238 aa11.12□□□□□ -0.63
CCDC175-205ENST00000556996 RC3H2Q9HBD1 1191 aaKnown RBP11.12□□□□□ -0.63
CCDC175-205ENST00000556996 IGSF5Q9NSI5 407 aa11.12□□□□□ -0.63
CCDC175-205ENST00000556996 DCAF1Q9Y4B6 1507 aa11.11□□□□□ -0.63
CCDC175-205ENST00000556996 CLEC3AO75596 197 aa11.11□□□□□ -0.63
CCDC175-205ENST00000556996 TAL1P17542 331 aaPredicted RBP11.11□□□□□ -0.63
CCDC175-205ENST00000556996 TPP2P29144 1249 aaPredicted RBP11.11□□□□□ -0.63
CCDC175-205ENST00000556996 CCNFP41002 786 aa11.11□□□□□ -0.63
CCDC175-205ENST00000556996 CHMP4BP1P59074 171 aa11.11□□□□□ -0.63
CCDC175-205ENST00000556996 SLC23A3Q6PIS1 610 aa11.11□□□□□ -0.63
CCDC175-205ENST00000556996 SPATA32Q96LK8 384 aa11.11□□□□□ -0.63
CCDC175-205ENST00000556996 RNF4P78317 190 aa11.1□□□□□ -0.63
CCDC175-205ENST00000556996 TSPYL5Q86VY4 417 aaPredicted RBP11.1□□□□□ -0.63
CCDC175-205ENST00000556996 TMC3Q7Z5M5 1100 aa11.09□□□□□ -0.63
CCDC175-205ENST00000556996 TAB3Q8N5C8 712 aaPredicted RBP11.09□□□□□ -0.63
CCDC175-205ENST00000556996 TM9SF2Q99805 663 aa11.09□□□□□ -0.63
CCDC175-205ENST00000556996 TRIT1Q9H3H1 467 aaKnown RBP11.09□□□□□ -0.63
CCDC175-205ENST00000556996 GPATCH2Q9NW75 528 aa11.09□□□□□ -0.63
CCDC175-205ENST00000556996 LMCD1Q9NZU5 365 aa11.09□□□□□ -0.63
CCDC175-205ENST00000556996 NBPF9Q3BBW0 867 aa11.08□□□□□ -0.64
CCDC175-205ENST00000556996 INTS3Q68E01 1043 aaKnown RBP11.08□□□□□ -0.64
CCDC175-205ENST00000556996 TMPRSS7Q7RTY8 843 aa11.08□□□□□ -0.64
CCDC175-205ENST00000556996 PPFIBP1Q86W92 1011 aa11.08□□□□□ -0.64
CCDC175-205ENST00000556996 CREG2Q8IUH2 290 aa11.08□□□□□ -0.64
CCDC175-205ENST00000556996 SRRTQ9BXP5 876 aaKnown RBP11.08□□□□□ -0.64
CCDC175-205ENST00000556996 C9IYK1 514 aa11.07□□□□□ -0.64
CCDC175-205ENST00000556996 GUCY2CP25092 1073 aa11.07□□□□□ -0.64
CCDC175-205ENST00000556996 GIPRP48546 466 aa11.07□□□□□ -0.64
CCDC175-205ENST00000556996 EIF6P56537 245 aaKnown RBP11.07□□□□□ -0.64
CCDC175-205ENST00000556996 UNC5AQ6ZN44 842 aa11.07□□□□□ -0.64
CCDC175-205ENST00000556996 SHDQ96IW2 340 aa11.07□□□□□ -0.64
CCDC175-205ENST00000556996 SUCOQ9UBS9 1254 aaKnown RBP11.07□□□□□ -0.64
CCDC175-205ENST00000556996 DUSP13Q9UII6 198 aa11.07□□□□□ -0.64
CCDC175-205ENST00000556996 E9PSI1 815 aa11.06□□□□□ -0.64
CCDC175-205ENST00000556996 ITGB5P18084 799 aa11.06□□□□□ -0.64
CCDC175-205ENST00000556996 NMIQ13287 307 aaPredicted RBP11.06□□□□□ -0.64
CCDC175-205ENST00000556996 TDRD10Q5VZ19 366 aaKnown RBP11.06□□□□□ -0.64
CCDC175-205ENST00000556996 HDAC8Q9BY41 377 aa11.06□□□□□ -0.64
CCDC175-205ENST00000556996 MKRN2Q9H000 416 aaKnown RBP11.06□□□□□ -0.64
CCDC175-205ENST00000556996 CAPN10Q9HC96 672 aa11.06□□□□□ -0.64
CCDC175-205ENST00000556996 C19orf73Q9NVV2 129 aa11.06□□□□□ -0.64
CCDC175-205ENST00000556996 MINPP1Q9UNW1 487 aa11.06□□□□□ -0.64
CCDC175-205ENST00000556996 PCDHA11Q9Y5I1 949 aa11.06□□□□□ -0.64
CCDC175-205ENST00000556996 PAPLNO95428 1278 aa11.05□□□□□ -0.64
CCDC175-205ENST00000556996 SEC16BQ96JE7 1060 aa11.05□□□□□ -0.64
CCDC175-205ENST00000556996 TINF2Q9BSI4 451 aa11.05□□□□□ -0.64
CCDC175-205ENST00000556996 PRDM14Q9GZV8 571 aa11.05□□□□□ -0.64
CCDC175-205ENST00000556996 ATF4P18848 351 aaPredicted RBP11.04□□□□□ -0.64
CCDC175-205ENST00000556996 RALGPS1Q5JS13 557 aa11.04□□□□□ -0.64
CCDC175-205ENST00000556996 FAM169BQ8N8A8 192 aa11.04□□□□□ -0.64
CCDC175-205ENST00000556996 CRBNQ96SW2 442 aa11.04□□□□□ -0.64
CCDC175-205ENST00000556996 FAM86C1Q9NVL1 165 aa11.04□□□□□ -0.64
CCDC175-205ENST00000556996 SLAMF8Q9P0V8 285 aa11.04□□□□□ -0.64
CCDC175-205ENST00000556996 LTBP3Q9NS15 1303 aa11.04□□□□□ -0.64
CCDC175-205ENST00000556996 DNAJC25-GNG10A0A024R161 153 aa11.03□□□□□ -0.64
CCDC175-205ENST00000556996 SHOXO15266 292 aa11.03□□□□□ -0.64
CCDC175-205ENST00000556996 LTKP29376 864 aa11.03□□□□□ -0.64
CCDC175-205ENST00000556996 ZEB1P37275 1124 aaPredicted RBP11.03□□□□□ -0.64
CCDC175-205ENST00000556996 PMS1P54277 932 aaKnown RBP11.03□□□□□ -0.64
CCDC175-205ENST00000556996 EGR3Q06889 387 aa11.03□□□□□ -0.64
CCDC175-205ENST00000556996 ALPK1Q96QP1 1244 aa11.03□□□□□ -0.64
CCDC175-205ENST00000556996 CTNND2Q9UQB3 1225 aa11.03□□□□□ -0.64
CCDC175-205ENST00000556996 PRAMEF1O95521 474 aa11.02□□□□□ -0.65
CCDC175-205ENST00000556996 CLEC16AQ2KHT3 1053 aa11.02□□□□□ -0.65
CCDC175-205ENST00000556996 TTC6Q86TZ1 520 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms