RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 C1QL4Q86Z23 238 aa6.02□□□□□ -1.45
SRP54-212ENST00000556992 GTF2IRD1Q9UHL9 959 aa6.02□□□□□ -1.45
SRP54-212ENST00000556992 SNX11Q9Y5W9 270 aa6.02□□□□□ -1.45
SRP54-212ENST00000556992 CNTLNQ9NXG0 1405 aa6.01□□□□□ -1.45
SRP54-212ENST00000556992 LMTK2Q8IWU2 1503 aa6.01□□□□□ -1.45
SRP54-212ENST00000556992 IQGAP3Q86VI3 1631 aa6.01□□□□□ -1.45
SRP54-212ENST00000556992 GNAT3A8MTJ3 354 aa6.01□□□□□ -1.45
SRP54-212ENST00000556992 RALBP1Q15311 655 aa6.01□□□□□ -1.45
SRP54-212ENST00000556992 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.01□□□□□ -1.45
SRP54-212ENST00000556992 MPZL3Q6UWV2 235 aa6.01□□□□□ -1.45
SRP54-212ENST00000556992 SYDE1Q6ZW31 735 aaPredicted RBP6.01□□□□□ -1.45
SRP54-212ENST00000556992 CITED4Q96RK1 184 aa6.01□□□□□ -1.45
SRP54-212ENST00000556992 TESK2Q96S53 571 aa6.01□□□□□ -1.45
SRP54-212ENST00000556992 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
SRP54-212ENST00000556992 C14orf93Q9H972 538 aaKnown RBP6.01□□□□□ -1.45
SRP54-212ENST00000556992 ATP13A1Q9HD20 1204 aa6.01□□□□□ -1.45
SRP54-212ENST00000556992 C19orf73Q9NVV2 129 aa6.01□□□□□ -1.45
SRP54-212ENST00000556992 KTN1Q86UP2 1357 aaKnown RBP6.01□□□□□ -1.45
SRP54-212ENST00000556992 CFAP74Q9C0B2 1584 aa6.01□□□□□ -1.45
SRP54-212ENST00000556992 ARHGAP31Q2M1Z3 1444 aa6□□□□□ -1.45
SRP54-212ENST00000556992 BMP6P22004 513 aa6□□□□□ -1.45
SRP54-212ENST00000556992 HNRNPUQ00839 825 aaKnown RBP eCLIP6□□□□□ -1.45
SRP54-212ENST00000556992 IDI1Q13907 227 aa6□□□□□ -1.45
SRP54-212ENST00000556992 CDKAL1Q5VV42 579 aa6□□□□□ -1.45
SRP54-212ENST00000556992 ARMCX6Q7L4S7 300 aa6□□□□□ -1.45
SRP54-212ENST00000556992 TMC7Q7Z402 723 aa6□□□□□ -1.45
SRP54-212ENST00000556992 LRRC56Q8IYG6 542 aaPredicted RBP6□□□□□ -1.45
SRP54-212ENST00000556992 KIRREL1Q96J84 757 aa6□□□□□ -1.45
SRP54-212ENST00000556992 HSPA12BQ96MM6 686 aa6□□□□□ -1.45
SRP54-212ENST00000556992 NECAB3Q96P71 396 aaPredicted RBP6□□□□□ -1.45
SRP54-212ENST00000556992 DIRC2Q96SL1 478 aa6□□□□□ -1.45
SRP54-212ENST00000556992 USTQ9Y2C2 406 aa6□□□□□ -1.45
SRP54-212ENST00000556992 GTF3C3Q9Y5Q9 886 aa6□□□□□ -1.45
SRP54-212ENST00000556992 KDM5CP41229 1560 aa6□□□□□ -1.45
SRP54-212ENST00000556992 VWDEQ8N2E2 1590 aa6□□□□□ -1.45
SRP54-212ENST00000556992 INO80Q9ULG1 1556 aaPredicted RBP6□□□□□ -1.45
SRP54-212ENST00000556992 ADGRF5Q8IZF2 1346 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 EIF3AQ14152 1382 aaKnown RBP5.99□□□□□ -1.45
SRP54-212ENST00000556992 PNMA6FA0A0J9YX94 578 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 H3BS24 57 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 IGF2BP3O00425 579 aaKnown RBP eCLIP5.99□□□□□ -1.45
SRP54-212ENST00000556992 SLITRK5O94991 958 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 C1QTNF9P0C862 333 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 ZBTB37Q5TC79 503 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 B4GALNT3Q6L9W6 998 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 TXNDC2Q86VQ3 553 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 C3orf58Q8NDZ4 430 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 ALKBH8Q96BT7 664 aaKnown RBP5.99□□□□□ -1.45
SRP54-212ENST00000556992 DMRTB1Q96MA1 342 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 SETDB2Q96T68 719 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 MRS2Q9HD23 443 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 PRDM5Q9NQX1 630 aaPredicted RBP5.99□□□□□ -1.45
SRP54-212ENST00000556992 PPP4R2Q9NY27 417 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 PCDHA4Q9UN74 947 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 MAP3K4Q9Y6R4 1608 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 TRPM2O94759 1503 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 PRDM15P57071 1507 aaPredicted RBP5.99□□□□□ -1.45
SRP54-212ENST00000556992 NPATQ14207 1427 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 YEATS2Q9ULM3 1422 aa5.99□□□□□ -1.45
SRP54-212ENST00000556992 PRAMEF27A3QJZ7 478 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 ENC1O14682 589 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 TSPAN15O95858 294 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 KRT1P04264 644 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 GLI1P08151 1106 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 AFMP43652 599 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 INPP5AQ14642 412 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 CYFIP1Q7L576 1253 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 TOX2Q96NM4 488 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 EMILIN2Q9BXX0 1053 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 RBCK1Q9BYM8 510 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 PANK3Q9H999 370 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 FBRSQ9HAH7 460 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 SEMA3GQ9NS98 782 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 CACNA2D2Q9NY47 1150 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 FAM53CQ9NYF3 392 aa5.98□□□□□ -1.45
SRP54-212ENST00000556992 EIF2AK4Q9P2K8 1649 aaKnown RBP5.97□□□□□ -1.45
SRP54-212ENST00000556992 TSPOAP1O95153 1857 aa5.97□□□□□ -1.45
SRP54-212ENST00000556992 XRCC5P13010 732 aaKnown RBP5.97□□□□□ -1.45
SRP54-212ENST00000556992 CLCN7P51798 805 aa5.97□□□□□ -1.45
SRP54-212ENST00000556992 HSPA2P54652 639 aa5.97□□□□□ -1.45
SRP54-212ENST00000556992 FGD1P98174 961 aa5.97□□□□□ -1.45
SRP54-212ENST00000556992 RING1Q06587 406 aa5.97□□□□□ -1.45
SRP54-212ENST00000556992 CDC37L1Q7L3B6 337 aa5.97□□□□□ -1.45
SRP54-212ENST00000556992 RIN3Q8TB24 985 aa5.97□□□□□ -1.45
SRP54-212ENST00000556992 PUS7Q96PZ0 661 aaKnown RBP5.97□□□□□ -1.45
SRP54-212ENST00000556992 FOXQ1Q9C009 403 aa5.97□□□□□ -1.45
SRP54-212ENST00000556992 NSUN3Q9H649 340 aaKnown RBP5.97□□□□□ -1.45
SRP54-212ENST00000556992 LMCD1Q9NZU5 365 aa5.97□□□□□ -1.45
SRP54-212ENST00000556992 TPX2Q9ULW0 747 aaKnown RBP5.97□□□□□ -1.45
SRP54-212ENST00000556992 KNSTRNQ9Y448 316 aa5.97□□□□□ -1.45
SRP54-212ENST00000556992 NOS1P29475 1434 aa5.97□□□□□ -1.45
SRP54-212ENST00000556992 SCAF11Q99590 1463 aaKnown RBP5.96□□□□□ -1.45
SRP54-212ENST00000556992 ADAMTSL3P82987 1691 aa5.96□□□□□ -1.46
SRP54-212ENST00000556992 FAM155AB1AL88 458 aaPredicted RBP5.96□□□□□ -1.46
SRP54-212ENST00000556992 CELA3AP09093 270 aa5.96□□□□□ -1.46
SRP54-212ENST00000556992 ZSCAN22P10073 491 aaPredicted RBP5.96□□□□□ -1.46
SRP54-212ENST00000556992 PTPN11Q06124 597 aaPredicted RBP5.96□□□□□ -1.46
SRP54-212ENST00000556992 MLECQ14165 292 aa5.96□□□□□ -1.46
SRP54-212ENST00000556992 NKG7Q16617 165 aa5.96□□□□□ -1.46
SRP54-212ENST00000556992 TMEM67Q5HYA8 995 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms