RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 ATP2B3Q16720 1220 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 XP32Q5T750 250 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 RNF20Q5VTR2 975 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 TXNRD3Q86VQ6 643 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 CLASRPQ8N2M8 674 aaKnown RBP6.48□□□□□ -1.37
ATXN3-244ENST00000556898 LARGE2Q8N3Y3 721 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 PI4K2BQ8TCG2 481 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 EDC3Q96F86 508 aaKnown RBP6.48□□□□□ -1.37
ATXN3-244ENST00000556898 XAGE2Q96GT9 111 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 NUCKS1Q9H1E3 243 aaKnown RBP6.48□□□□□ -1.37
ATXN3-244ENST00000556898 TIMMDC1Q9NPL8 285 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 RAB6BQ9NRW1 208 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 ADARB2Q9NS39 739 aaKnown RBP6.48□□□□□ -1.37
ATXN3-244ENST00000556898 IQSEC3Q9UPP2 1182 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-244ENST00000556898 PCDHB11Q9Y5F2 797 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 MROH5Q6ZUA9 1318 aa6.48□□□□□ -1.37
ATXN3-244ENST00000556898 SHISA8B8ZZ34 492 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 BBOX1O75936 387 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 IL2RAP01589 272 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 F11P03951 625 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 MX1P20591 662 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 PHKA1P46020 1223 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 GYG1P46976 350 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 NOGQ13253 232 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 UBAP2LQ14157 1087 aaKnown RBP6.47□□□□□ -1.37
ATXN3-244ENST00000556898 CIAPIN1Q6FI81 312 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 PI16Q6UXB8 463 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 SP8Q8IXZ3 490 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 GLMNQ92990 594 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 TRERF1Q96PN7 1200 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 VPS33BQ9H267 617 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 BOLA2Q9H3K6 86 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 GPR108Q9NPR9 543 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 ECHDC1Q9NTX5 307 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 POLLQ9UGP5 575 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 PGAP2Q9UHJ9 254 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 NSFL1CQ9UNZ2 370 aaKnown RBP6.47□□□□□ -1.37
ATXN3-244ENST00000556898 JAG2Q9Y219 1238 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 ATP6V0A2Q9Y487 856 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 IRS2Q9Y4H2 1338 aa6.47□□□□□ -1.37
ATXN3-244ENST00000556898 A0A1B0GUL6 1792 aa6.46□□□□□ -1.37
ATXN3-244ENST00000556898 SLX4Q8IY92 1834 aa6.46□□□□□ -1.37
ATXN3-244ENST00000556898 KRBA1A5PL33 1030 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 UFL1O94874 794 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 CHGBP05060 677 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 SLC5A1P13866 664 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 PHKA2P46019 1235 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 KCNJ4P48050 445 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 SEMA3FQ13275 785 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 PUM3Q15397 648 aaKnown RBP6.46□□□□□ -1.38
ATXN3-244ENST00000556898 SLFNL1Q499Z3 407 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 WDR44Q5JSH3 913 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 TTC22Q5TAA0 569 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 CCDC102BQ68D86 513 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 CDC37L1Q7L3B6 337 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 TAS1R3Q7RTX0 852 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 CYP2U1Q7Z449 544 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 NIM1KQ8IY84 436 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 PHTF2Q8N3S3 785 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 TBC1D16Q8TBP0 767 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 ANKRD2Q9GZV1 360 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 TMX4Q9H1E5 349 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-244ENST00000556898 ANTXR1Q9H6X2 564 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 GPAMQ9HCL2 828 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 DUOX1Q9NRD9 1551 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 GPRC5DQ9NZD1 345 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 ANKIB1Q9P2G1 1089 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 STAP2Q9UGK3 403 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 HRH3Q9Y5N1 445 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 ZNF804BA4D1E1 1349 aa6.46□□□□□ -1.38
ATXN3-244ENST00000556898 CACNA1SQ13698 1873 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 LRRC37AA6NMS7 1700 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 SNED1Q8TER0 1413 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 IFIT1P09914 478 aaKnown RBP6.45□□□□□ -1.38
ATXN3-244ENST00000556898 SDSP20132 328 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 SOX10P56693 466 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 CENPCQ03188 943 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 TTC39AQ5SRH9 613 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 GORABQ5T7V8 394 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 PODNQ7Z5L7 613 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 LPIN2Q92539 896 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 FAM84BQ96KN1 310 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-244ENST00000556898 UCN2Q96RP3 112 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 DNAJC2Q99543 621 aaKnown RBP6.45□□□□□ -1.38
ATXN3-244ENST00000556898 OXCT2Q9BYC2 517 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-244ENST00000556898 GLIS2Q9BZE0 524 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-244ENST00000556898 SAGE1Q9NXZ1 904 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 ZNRF3Q9ULT6 936 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 AKAP2Q9Y2D5 859 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 COL1A1P02452 1464 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-244ENST00000556898 SCN4AP35499 1836 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 XDHP47989 1333 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 TIAM2Q8IVF5 1701 aa6.45□□□□□ -1.38
ATXN3-244ENST00000556898 C2CD2LO14523 706 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 PPIP5K2O43314 1243 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 HOXB4P17483 251 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-244ENST00000556898 ATP5JP18859 108 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 ATP2B4P23634 1241 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 COL8A1P27658 744 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 MCAMP43121 646 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms