RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 FAM214BQ7L5A3 538 aa6.79□□□□□ -1.32
ATXN3-243ENST00000556671 TRAIPQ9BWF2 469 aa6.79□□□□□ -1.32
ATXN3-243ENST00000556671 CYP8B1Q9UNU6 501 aa6.79□□□□□ -1.32
ATXN3-243ENST00000556671 CSADQ9Y600 493 aa6.79□□□□□ -1.32
ATXN3-243ENST00000556671 SYNMO15061 1565 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 HFM1A2PYH4 1435 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 ARHGAP31Q2M1Z3 1444 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 FANCGO15287 622 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 LDHBP07195 334 aaKnown RBP6.78□□□□□ -1.32
ATXN3-243ENST00000556671 CD8BP10966 210 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 TRIM26Q12899 539 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-243ENST00000556671 ZNF792Q3KQV3 632 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 ZBTB37Q5TC79 503 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 PCNX4Q63HM2 1172 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 ARHGAP27Q6ZUM4 889 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 UBE3DQ7Z6J8 389 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 C12orf40Q86WS4 652 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 ASIC4Q96FT7 647 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 HEXIM2Q96MH2 286 aaKnown RBP6.78□□□□□ -1.32
ATXN3-243ENST00000556671 FRMD6Q96NE9 622 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 SLC26A8Q96RN1 970 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 TNKS2Q9H2K2 1166 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 PCDHA4Q9UN74 947 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 PLAGL2Q9UPG8 496 aa6.78□□□□□ -1.32
ATXN3-243ENST00000556671 IQGAP1P46940 1657 aa6.77□□□□□ -1.32
ATXN3-243ENST00000556671 LMTK2Q8IWU2 1503 aa6.77□□□□□ -1.33
ATXN3-243ENST00000556671 TMEM265A0A087WTH1 108 aa6.77□□□□□ -1.33
ATXN3-243ENST00000556671 FUT4P22083 530 aa6.77□□□□□ -1.33
ATXN3-243ENST00000556671 LTKP29376 864 aa6.77□□□□□ -1.33
ATXN3-243ENST00000556671 HRASLS5Q96KN8 279 aa6.77□□□□□ -1.33
ATXN3-243ENST00000556671 PRDM10Q9NQV6 1147 aa6.77□□□□□ -1.33
ATXN3-243ENST00000556671 RAB3GAP2Q9H2M9 1393 aa6.77□□□□□ -1.33
ATXN3-243ENST00000556671 ZNF335Q9H4Z2 1342 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-243ENST00000556671 PATL2C9JE40 543 aaKnown RBP6.76□□□□□ -1.33
ATXN3-243ENST00000556671 IGF2BP3O00425 579 aaKnown RBP eCLIP6.76□□□□□ -1.33
ATXN3-243ENST00000556671 PAPLNO95428 1278 aa6.76□□□□□ -1.33
ATXN3-243ENST00000556671 YBX3P16989 372 aaKnown RBP eCLIP6.76□□□□□ -1.33
ATXN3-243ENST00000556671 CD96P40200 585 aa6.76□□□□□ -1.33
ATXN3-243ENST00000556671 AOC3Q16853 763 aa6.76□□□□□ -1.33
ATXN3-243ENST00000556671 SV2BQ7L1I2 683 aa6.76□□□□□ -1.33
ATXN3-243ENST00000556671 KCT2Q8NC54 265 aa6.76□□□□□ -1.33
ATXN3-243ENST00000556671 PICK1Q9NRD5 415 aa6.76□□□□□ -1.33
ATXN3-243ENST00000556671 RPRD2Q5VT52 1461 aaKnown RBP6.76□□□□□ -1.33
ATXN3-243ENST00000556671 TMEM131LA2VDJ0 1609 aa6.76□□□□□ -1.33
ATXN3-243ENST00000556671 GNA15P30679 374 aa6.75□□□□□ -1.33
ATXN3-243ENST00000556671 OGFOD2Q6N063 350 aa6.75□□□□□ -1.33
ATXN3-243ENST00000556671 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.75□□□□□ -1.33
ATXN3-243ENST00000556671 GAL3ST3Q96A11 431 aa6.75□□□□□ -1.33
ATXN3-243ENST00000556671 ELMO3Q96BJ8 720 aa6.75□□□□□ -1.33
ATXN3-243ENST00000556671 GTF2IRD1Q9UHL9 959 aa6.75□□□□□ -1.33
ATXN3-243ENST00000556671 TTF2Q9UNY4 1162 aaKnown RBP6.75□□□□□ -1.33
ATXN3-243ENST00000556671 SNX11Q9Y5W9 270 aa6.75□□□□□ -1.33
ATXN3-243ENST00000556671 CLTCL1P53675 1640 aa6.75□□□□□ -1.33
ATXN3-243ENST00000556671 PTPRTO14522 1441 aa6.75□□□□□ -1.33
ATXN3-243ENST00000556671 NPHP4O75161 1426 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-243ENST00000556671 NOS1P29475 1434 aa6.75□□□□□ -1.33
ATXN3-243ENST00000556671 KDM5AP29375 1690 aaKnown RBP6.74□□□□□ -1.33
ATXN3-243ENST00000556671 ITIH2P19823 946 aa6.74□□□□□ -1.33
ATXN3-243ENST00000556671 PTPN11Q06124 597 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-243ENST00000556671 INPP5AQ14642 412 aa6.74□□□□□ -1.33
ATXN3-243ENST00000556671 LRFN4Q6PJG9 635 aa6.74□□□□□ -1.33
ATXN3-243ENST00000556671 CDC37L1Q7L3B6 337 aa6.74□□□□□ -1.33
ATXN3-243ENST00000556671 CYFIP1Q7L576 1253 aa6.74□□□□□ -1.33
ATXN3-243ENST00000556671 KRTAP9-9Q9BYP9 154 aa6.74□□□□□ -1.33
ATXN3-243ENST00000556671 KRTAP9-4Q9BYQ2 154 aa6.74□□□□□ -1.33
ATXN3-243ENST00000556671 MBNL3Q9NUK0 354 aaKnown RBP6.74□□□□□ -1.33
ATXN3-243ENST00000556671 ADAMTS6Q9UKP5 1117 aa6.74□□□□□ -1.33
ATXN3-243ENST00000556671 ADGRB3O60242 1522 aa6.74□□□□□ -1.33
ATXN3-243ENST00000556671 STRCP1A6NGW2 1772 aa6.74□□□□□ -1.33
ATXN3-243ENST00000556671 RIMS2Q9UQ26 1411 aa6.74□□□□□ -1.33
ATXN3-243ENST00000556671 CHD2O14647 1828 aaKnown RBP6.73□□□□□ -1.33
ATXN3-243ENST00000556671 PLA2R1Q13018 1463 aa6.73□□□□□ -1.33
ATXN3-243ENST00000556671 SCAF11Q99590 1463 aaKnown RBP6.73□□□□□ -1.33
ATXN3-243ENST00000556671 TMEM2Q9UHN6 1383 aa6.73□□□□□ -1.33
ATXN3-243ENST00000556671 BIN1O00499 593 aa6.73□□□□□ -1.33
ATXN3-243ENST00000556671 PRPF40AO75400 957 aaKnown RBP6.73□□□□□ -1.33
ATXN3-243ENST00000556671 EOMESO95936 686 aa6.73□□□□□ -1.33
ATXN3-243ENST00000556671 RNASE1P07998 156 aaKnown RBP6.73□□□□□ -1.33
ATXN3-243ENST00000556671 EIF4BP23588 611 aaKnown RBP6.73□□□□□ -1.33
ATXN3-243ENST00000556671 ARMCX6Q7L4S7 300 aa6.73□□□□□ -1.33
ATXN3-243ENST00000556671 SPACA3Q8IXA5 215 aa6.73□□□□□ -1.33
ATXN3-243ENST00000556671 ZNF507Q8TCN5 953 aa6.73□□□□□ -1.33
ATXN3-243ENST00000556671 PCGF6Q9BYE7 350 aa6.73□□□□□ -1.33
ATXN3-243ENST00000556671 RC3H2Q9HBD1 1191 aaKnown RBP6.73□□□□□ -1.33
ATXN3-243ENST00000556671 NEURL4Q96JN8 1562 aa6.73□□□□□ -1.33
ATXN3-243ENST00000556671 PPLO60437 1756 aa6.72□□□□□ -1.33
ATXN3-243ENST00000556671 BTBD11A6QL63 1104 aa6.72□□□□□ -1.33
ATXN3-243ENST00000556671 LRIG2O94898 1065 aa6.72□□□□□ -1.33
ATXN3-243ENST00000556671 ANGEL2Q5VTE6 544 aaKnown RBP6.72□□□□□ -1.33
ATXN3-243ENST00000556671 TTBK2Q6IQ55 1244 aa6.72□□□□□ -1.33
ATXN3-243ENST00000556671 ATG4DQ86TL0 474 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-243ENST00000556671 HOMEZQ8IX15 550 aa6.72□□□□□ -1.33
ATXN3-243ENST00000556671 POU5F2Q8N7G0 328 aa6.72□□□□□ -1.33
ATXN3-243ENST00000556671 PI4K2BQ8TCG2 481 aa6.72□□□□□ -1.33
ATXN3-243ENST00000556671 PLPPR2Q96GM1 343 aa6.72□□□□□ -1.33
ATXN3-243ENST00000556671 SNCAIPQ9Y6H5 919 aa6.72□□□□□ -1.33
ATXN3-243ENST00000556671 AK5Q9Y6K8 562 aa6.72□□□□□ -1.33
ATXN3-243ENST00000556671 XIRP1Q702N8 1843 aaKnown RBP6.71□□□□□ -1.33
ATXN3-243ENST00000556671 CCDC144AA2RUR9 1427 aa6.71□□□□□ -1.34
ATXN3-243ENST00000556671 PRAMEF27A3QJZ7 478 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms