RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 RELL1Q8IUW5 271 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 SPACA3Q8IXA5 215 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 TP53INP2Q8IXH6 220 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 MRPL41Q8IXM3 137 aaKnown RBP7.01□□□□□ -1.29
SRP54-211ENST00000556445 MFSD2AQ8NA29 543 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 GATAD2BQ8WXI9 593 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 UBXN4Q92575 508 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 MIPEPQ99797 713 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 COPRSQ9NQ92 184 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 VAV3Q9UKW4 847 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 CORINQ9Y5Q5 1042 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 PTPRKQ15262 1439 aa7.01□□□□□ -1.29
SRP54-211ENST00000556445 ABCC10Q5T3U5 1492 aa7□□□□□ -1.29
SRP54-211ENST00000556445 TMEM265A0A087WTH1 108 aa7□□□□□ -1.29
SRP54-211ENST00000556445 NKPD1Q17RQ9 610 aa7□□□□□ -1.29
SRP54-211ENST00000556445 ARHGAP27Q6ZUM4 889 aa7□□□□□ -1.29
SRP54-211ENST00000556445 AGBL5Q8NDL9 886 aa7□□□□□ -1.29
SRP54-211ENST00000556445 RIN3Q8TB24 985 aa7□□□□□ -1.29
SRP54-211ENST00000556445 TMEM87BQ96K49 555 aa7□□□□□ -1.29
SRP54-211ENST00000556445 PRDM5Q9NQX1 630 aaPredicted RBP7□□□□□ -1.29
SRP54-211ENST00000556445 KBTBD4Q9NVX7 518 aa7□□□□□ -1.29
SRP54-211ENST00000556445 ADAM30Q9UKF2 790 aa7□□□□□ -1.29
SRP54-211ENST00000556445 MAPK8IP1Q9UQF2 711 aa7□□□□□ -1.29
SRP54-211ENST00000556445 MAPKBP1O60336 1514 aa7□□□□□ -1.29
SRP54-211ENST00000556445 ADGBQ8N7X0 1667 aa7□□□□□ -1.29
SRP54-211ENST00000556445 ADGRL2O95490 1459 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 PLEKHH2Q8IVE3 1493 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 SHANK2Q9UPX8 1470 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 CDC42BPAQ5VT25 1732 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 ANKRD30AQ9BXX3 1397 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 RBAK-RBAKDNI3L0D1 243 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 CD8BP10966 210 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 TAL1P17542 331 aaPredicted RBP6.99□□□□□ -1.29
SRP54-211ENST00000556445 CD96P40200 585 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 FAM160A1Q05DH4 1040 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 PDE4BQ07343 736 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 LETMD1Q6P1Q0 360 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 C22orf34Q6ZV56 151 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 XAGE3Q8WTP9 111 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 ACSF2Q96CM8 615 aaPredicted RBP6.99□□□□□ -1.29
SRP54-211ENST00000556445 HRASLS5Q96KN8 279 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 DPH2Q9BQC3 489 aaPredicted RBP6.99□□□□□ -1.29
SRP54-211ENST00000556445 KCNQ5Q9NR82 932 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 SNX11Q9Y5W9 270 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 ABCC5O15440 1437 aa6.99□□□□□ -1.29
SRP54-211ENST00000556445 KDM5BQ9UGL1 1544 aa6.98□□□□□ -1.29
SRP54-211ENST00000556445 ANKRD62A6NC57 917 aa6.98□□□□□ -1.29
SRP54-211ENST00000556445 MINDY4BA8MYZ0 360 aa6.98□□□□□ -1.29
SRP54-211ENST00000556445 PRR33A8MZF0 331 aa6.98□□□□□ -1.29
SRP54-211ENST00000556445 BPNT1O95861 308 aa6.98□□□□□ -1.29
SRP54-211ENST00000556445 TSPY4P0CV99 314 aa6.98□□□□□ -1.29
SRP54-211ENST00000556445 TSPY10P0CW01 314 aa6.98□□□□□ -1.29
SRP54-211ENST00000556445 ZC3H6P61129 1189 aaKnown RBP6.98□□□□□ -1.29
SRP54-211ENST00000556445 AOC3Q16853 763 aa6.98□□□□□ -1.29
SRP54-211ENST00000556445 SNAP47Q5SQN1 464 aa6.98□□□□□ -1.29
SRP54-211ENST00000556445 SLC6A19Q695T7 634 aa6.98□□□□□ -1.29
SRP54-211ENST00000556445 MCATQ8IVS2 390 aaKnown RBP6.98□□□□□ -1.29
SRP54-211ENST00000556445 GOLM1Q8NBJ4 401 aa6.98□□□□□ -1.29
SRP54-211ENST00000556445 POLR3KQ9Y2Y1 108 aaPredicted RBP6.98□□□□□ -1.29
SRP54-211ENST00000556445 ARHGEF5Q12774 1597 aa6.98□□□□□ -1.29
SRP54-211ENST00000556445 PRR36Q9H6K5 1346 aa6.98□□□□□ -1.29
SRP54-211ENST00000556445 PREX2Q70Z35 1606 aa6.98□□□□□ -1.29
SRP54-211ENST00000556445 CROCC2H7BZ55 1655 aa6.97□□□□□ -1.29
SRP54-211ENST00000556445 GNAT3A8MTJ3 354 aa6.97□□□□□ -1.29
SRP54-211ENST00000556445 ZNF865P0CJ78 1059 aaPredicted RBP6.97□□□□□ -1.29
SRP54-211ENST00000556445 FUT4P22083 530 aa6.97□□□□□ -1.29
SRP54-211ENST00000556445 TMEM201Q5SNT2 666 aa6.97□□□□□ -1.29
SRP54-211ENST00000556445 FAM196AQ6ZSG2 479 aa6.97□□□□□ -1.29
SRP54-211ENST00000556445 DNAJB8Q8NHS0 232 aa6.97□□□□□ -1.29
SRP54-211ENST00000556445 FBXO27Q8NI29 283 aa6.97□□□□□ -1.29
SRP54-211ENST00000556445 HIRIP3Q9BW71 556 aaPredicted RBP6.97□□□□□ -1.29
SRP54-211ENST00000556445 RRP7BPQ9NSQ0 103 aa6.97□□□□□ -1.29
SRP54-211ENST00000556445 TPX2Q9ULW0 747 aaKnown RBP6.97□□□□□ -1.29
SRP54-211ENST00000556445 PLCG1P19174 1290 aa6.96□□□□□ -1.3
SRP54-211ENST00000556445 VAMP1P23763 118 aa6.96□□□□□ -1.3
SRP54-211ENST00000556445 CLCN7P51798 805 aa6.96□□□□□ -1.3
SRP54-211ENST00000556445 MPP2Q14168 576 aa6.96□□□□□ -1.3
SRP54-211ENST00000556445 PLCL1Q15111 1095 aa6.96□□□□□ -1.3
SRP54-211ENST00000556445 SFRP5Q5T4F7 317 aa6.96□□□□□ -1.3
SRP54-211ENST00000556445 DIEXFQ68CQ4 756 aaKnown RBP6.96□□□□□ -1.3
SRP54-211ENST00000556445 FBXL19Q6PCT2 694 aa6.96□□□□□ -1.3
SRP54-211ENST00000556445 PSMD1Q99460 953 aa6.96□□□□□ -1.3
SRP54-211ENST00000556445 GGT7Q9UJ14 662 aa6.96□□□□□ -1.3
SRP54-211ENST00000556445 CAPN6Q9Y6Q1 641 aa6.96□□□□□ -1.3
SRP54-211ENST00000556445 ZCCHC11Q5TAX3 1644 aaKnown RBP6.96□□□□□ -1.3
SRP54-211ENST00000556445 PITPNM2Q9BZ72 1349 aa6.96□□□□□ -1.3
SRP54-211ENST00000556445 MYO5CQ9NQX4 1742 aa6.96□□□□□ -1.3
SRP54-211ENST00000556445 ERCC6L2Q5T890 1561 aa6.95□□□□□ -1.3
SRP54-211ENST00000556445 NCOA1Q15788 1441 aa6.95□□□□□ -1.3
SRP54-211ENST00000556445 KIAA1107Q9UPP5 1409 aa6.95□□□□□ -1.3
SRP54-211ENST00000556445 GREM1O60565 184 aa6.95□□□□□ -1.3
SRP54-211ENST00000556445 EIF4A3P38919 411 aaKnown RBP6.95□□□□□ -1.3
SRP54-211ENST00000556445 SF3A1Q15459 793 aaKnown RBP6.95□□□□□ -1.3
SRP54-211ENST00000556445 ZNF792Q3KQV3 632 aa6.95□□□□□ -1.3
SRP54-211ENST00000556445 TAF7LQ5H9L4 462 aa6.95□□□□□ -1.3
SRP54-211ENST00000556445 ZNF746Q6NUN9 644 aaPredicted RBP6.95□□□□□ -1.3
SRP54-211ENST00000556445 REC114Q7Z4M0 266 aa6.95□□□□□ -1.3
SRP54-211ENST00000556445 CDH24Q86UP0 819 aa6.95□□□□□ -1.3
SRP54-211ENST00000556445 MFSD4AQ8N468 514 aa6.95□□□□□ -1.3
SRP54-211ENST00000556445 PPP1R13LQ8WUF5 828 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms