RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 NRXN2Q9P2S2 1712 aa6.47□□□□□ -1.37
ATXN3-239ENST00000556315 ZBTB42B2RXF5 422 aa6.47□□□□□ -1.37
ATXN3-239ENST00000556315 DIAPH1O60610 1272 aaKnown RBP6.47□□□□□ -1.37
ATXN3-239ENST00000556315 NOGQ13253 232 aa6.47□□□□□ -1.37
ATXN3-239ENST00000556315 CIAPIN1Q6FI81 312 aa6.47□□□□□ -1.37
ATXN3-239ENST00000556315 FAM35AQ86V20 835 aa6.47□□□□□ -1.37
ATXN3-239ENST00000556315 MYO19Q96H55 970 aa6.47□□□□□ -1.37
ATXN3-239ENST00000556315 VPS33BQ9H267 617 aa6.47□□□□□ -1.37
ATXN3-239ENST00000556315 PGAP2Q9UHJ9 254 aa6.47□□□□□ -1.37
ATXN3-239ENST00000556315 USP16Q9Y5T5 823 aa6.47□□□□□ -1.37
ATXN3-239ENST00000556315 SCO2A0A1W2PP80 73 aa6.46□□□□□ -1.38
ATXN3-239ENST00000556315 FAM177BA6PVY3 158 aa6.46□□□□□ -1.38
ATXN3-239ENST00000556315 BTBD11A6QL63 1104 aa6.46□□□□□ -1.38
ATXN3-239ENST00000556315 SNRPA1P09661 255 aaKnown RBP6.46□□□□□ -1.38
ATXN3-239ENST00000556315 ARID4AP29374 1257 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-239ENST00000556315 HOXA10P31260 410 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-239ENST00000556315 ARSDP51689 593 aa6.46□□□□□ -1.38
ATXN3-239ENST00000556315 TJP1Q07157 1748 aa6.46□□□□□ -1.38
ATXN3-239ENST00000556315 FKBP5Q13451 457 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-239ENST00000556315 CRY2Q49AN0 593 aa6.46□□□□□ -1.38
ATXN3-239ENST00000556315 PERM1Q5SV97 790 aa6.46□□□□□ -1.38
ATXN3-239ENST00000556315 CDC37L1Q7L3B6 337 aa6.46□□□□□ -1.38
ATXN3-239ENST00000556315 DHX32Q7L7V1 743 aaKnown RBP6.46□□□□□ -1.38
ATXN3-239ENST00000556315 FBXO11Q86XK2 927 aa6.46□□□□□ -1.38
ATXN3-239ENST00000556315 NIM1KQ8IY84 436 aa6.46□□□□□ -1.38
ATXN3-239ENST00000556315 CCER1Q8TC90 406 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-239ENST00000556315 IFT43Q96FT9 208 aa6.46□□□□□ -1.38
ATXN3-239ENST00000556315 TMX4Q9H1E5 349 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-239ENST00000556315 ZFP64Q9NPA5 681 aa6.46□□□□□ -1.38
ATXN3-239ENST00000556315 GPRC5DQ9NZD1 345 aa6.46□□□□□ -1.38
ATXN3-239ENST00000556315 ANKRD26Q9UPS8 1709 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-239ENST00000556315 KCNQ3O43525 872 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 MICAL2O94851 1124 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 CPB1P15086 417 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 TARSP26639 723 aaKnown RBP6.45□□□□□ -1.38
ATXN3-239ENST00000556315 SOX10P56693 466 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 GPLD1P80108 840 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 C11orf91Q3C1V1 193 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 PHLDB3Q6NSJ2 640 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 RPGRQ92834 1020 aaKnown RBP6.45□□□□□ -1.38
ATXN3-239ENST00000556315 TP53INP1Q96A56 240 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 RBM17Q96I25 401 aaKnown RBP6.45□□□□□ -1.38
ATXN3-239ENST00000556315 CRAMP1Q96RY5 1269 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 KRTAP9-2Q9BYQ4 174 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 GLIS2Q9BZE0 524 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-239ENST00000556315 NYXQ9GZU5 481 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 SAGE1Q9NXZ1 904 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 ZNRF3Q9ULT6 936 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 MRC1P22897 1456 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 SCN4AP35499 1836 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 KIF20BQ96Q89 1820 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 TIAM2Q8IVF5 1701 aa6.45□□□□□ -1.38
ATXN3-239ENST00000556315 OPLAHO14841 1288 aa6.44□□□□□ -1.38
ATXN3-239ENST00000556315 PPIP5K2O43314 1243 aa6.44□□□□□ -1.38
ATXN3-239ENST00000556315 EGFRP00533 1210 aa6.44□□□□□ -1.38
ATXN3-239ENST00000556315 PIP4K2AP48426 406 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-239ENST00000556315 HUNKP57058 714 aa6.44□□□□□ -1.38
ATXN3-239ENST00000556315 PLAURQ03405 335 aa6.44□□□□□ -1.38
ATXN3-239ENST00000556315 CXCL9Q07325 125 aa6.44□□□□□ -1.38
ATXN3-239ENST00000556315 HLFQ16534 295 aa6.44□□□□□ -1.38
ATXN3-239ENST00000556315 SUPT20HQ8NEM7 779 aa6.44□□□□□ -1.38
ATXN3-239ENST00000556315 MKNK1Q9BUB5 465 aa6.44□□□□□ -1.38
ATXN3-239ENST00000556315 ZNF408Q9H9D4 720 aa6.44□□□□□ -1.38
ATXN3-239ENST00000556315 KIF7Q2M1P5 1343 aa6.44□□□□□ -1.38
ATXN3-239ENST00000556315 AFDNP55196 1824 aaKnown RBP6.43□□□□□ -1.38
ATXN3-239ENST00000556315 FER1L6Q2WGJ9 1857 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 PRAMEF22A3QJZ6 481 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 ERVV-1B6SEH8 477 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 H7C1D1 291 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 TCERG1O14776 1098 aaKnown RBP6.43□□□□□ -1.38
ATXN3-239ENST00000556315 SASH3O75995 380 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 RARAP10276 462 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 GMPSP49915 693 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-239ENST00000556315 NRLP54845 237 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 KIF23Q02241 960 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-239ENST00000556315 TNIP1Q15025 636 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 RGMBQ6NW40 437 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 ELMSAN1Q6PJG2 1045 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 KRT25Q7Z3Z0 450 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 USP48Q86UV5 1035 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 C2orf69Q8N8R5 385 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 WFDC12Q8WWY7 111 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 GCC1Q96CN9 775 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 BCL2L13Q9BXK5 485 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 RNF186Q9NXI6 227 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 LRFN2Q9ULH4 789 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 GNEQ9Y223 722 aaKnown RBP6.43□□□□□ -1.38
ATXN3-239ENST00000556315 ATP6V0A2Q9Y487 856 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 DLEC1Q9Y238 1755 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 VIRMAQ69YN4 1812 aaKnown RBP6.43□□□□□ -1.38
ATXN3-239ENST00000556315 SLX4Q8IY92 1834 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 NPC1L1Q9UHC9 1359 aa6.43□□□□□ -1.38
ATXN3-239ENST00000556315 ADAMTSL1Q8N6G6 1762 aa6.42□□□□□ -1.38
ATXN3-239ENST00000556315 FAM155AB1AL88 458 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-239ENST00000556315 U2SURPO15042 1029 aaKnown RBP6.42□□□□□ -1.38
ATXN3-239ENST00000556315 TRPA1O75762 1119 aa6.42□□□□□ -1.38
ATXN3-239ENST00000556315 BBOX1O75936 387 aa6.42□□□□□ -1.38
ATXN3-239ENST00000556315 LRP8Q14114 963 aa6.42□□□□□ -1.38
ATXN3-239ENST00000556315 PKN2Q16513 984 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms