RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 MYH4Q9Y623 1939 aa13.76□□□□□ -0.21
SLIRP-205ENST00000556310 RBBP6Q7Z6E9 1792 aaKnown RBP13.76□□□□□ -0.21
SLIRP-205ENST00000556310 A0A0G2JMZ2 1700 aa13.76□□□□□ -0.21
SLIRP-205ENST00000556310 FOXP2O15409 715 aa13.76□□□□□ -0.21
SLIRP-205ENST00000556310 VCAM1P19320 739 aa13.76□□□□□ -0.21
SLIRP-205ENST00000556310 PSMC4P43686 418 aa13.76□□□□□ -0.21
SLIRP-205ENST00000556310 NMIQ13287 307 aaPredicted RBP13.76□□□□□ -0.21
SLIRP-205ENST00000556310 MCMDC2Q4G0Z9 681 aa13.76□□□□□ -0.21
SLIRP-205ENST00000556310 TRIM47Q96LD4 638 aa13.76□□□□□ -0.21
SLIRP-205ENST00000556310 SH2D4AQ9H788 454 aa13.76□□□□□ -0.21
SLIRP-205ENST00000556310 ZNF287Q9HBT7 754 aa13.76□□□□□ -0.21
SLIRP-205ENST00000556310 ARHGEF10LQ9HCE6 1279 aa13.76□□□□□ -0.21
SLIRP-205ENST00000556310 CENPFP49454 3210 aa13.75□□□□□ -0.21
SLIRP-205ENST00000556310 PLIN4Q96Q06 1357 aa13.75□□□□□ -0.21
SLIRP-205ENST00000556310 ZMYM6O95789 1325 aa13.75□□□□□ -0.21
SLIRP-205ENST00000556310 CCDC171Q6TFL3 1326 aa13.75□□□□□ -0.21
SLIRP-205ENST00000556310 RLFQ13129 1914 aa13.75□□□□□ -0.21
SLIRP-205ENST00000556310 A0A1W2PRG0 241 aa13.75□□□□□ -0.21
SLIRP-205ENST00000556310 GTPBP6O43824 516 aaPredicted RBP13.75□□□□□ -0.21
SLIRP-205ENST00000556310 SDSP20132 328 aa13.75□□□□□ -0.21
SLIRP-205ENST00000556310 RASA1P20936 1047 aa13.75□□□□□ -0.21
SLIRP-205ENST00000556310 CTGFP29279 349 aa13.75□□□□□ -0.21
SLIRP-205ENST00000556310 CLCN6P51797 869 aa13.75□□□□□ -0.21
SLIRP-205ENST00000556310 PRMT2P55345 433 aa13.75□□□□□ -0.21
SLIRP-205ENST00000556310 FCGRTP55899 365 aa13.75□□□□□ -0.21
SLIRP-205ENST00000556310 CLEC10AQ8IUN9 316 aa13.75□□□□□ -0.21
SLIRP-205ENST00000556310 ANKRD13CQ8N6S4 541 aa13.75□□□□□ -0.21
SLIRP-205ENST00000556310 GTF3C2Q8WUA4 911 aaPredicted RBP13.75□□□□□ -0.21
SLIRP-205ENST00000556310 MKNK2Q9HBH9 465 aa13.75□□□□□ -0.21
SLIRP-205ENST00000556310 USP17L15C9J2P7 530 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 USP17L13C9JLJ4 530 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 USP17L11C9JVI0 530 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 USP17L18D6R9N7 530 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 USP17L22D6RA61 530 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 USP17L17D6RBQ6 530 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 USP17L19D6RCP7 530 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 USP17L20D6RJB6 530 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 HIP1O00291 1037 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 FMNL1O95466 1100 aaPredicted RBP13.74□□□□□ -0.21
SLIRP-205ENST00000556310 SLC3A2P08195 630 aaKnown RBP13.74□□□□□ -0.21
SLIRP-205ENST00000556310 HERVK_113P62684 666 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 PPARAQ07869 468 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 USP17L24Q0WX57 530 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 TTC22Q5TAA0 569 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 VPS53Q5VIR6 699 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 ZNF589Q86UQ0 364 aaPredicted RBP13.74□□□□□ -0.21
SLIRP-205ENST00000556310 KANSL2Q9H9L4 492 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 DIAPH3Q9NSV4 1193 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 MORF4L1Q9UBU8 362 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 SRRDQ9UH36 339 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 TMX2Q9Y320 296 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 PTCH2Q9Y6C5 1203 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 DOCK3Q8IZD9 2030 aa13.74□□□□□ -0.21
SLIRP-205ENST00000556310 MYPNQ86TC9 1320 aa13.73□□□□□ -0.21
SLIRP-205ENST00000556310 GSPT1P15170 499 aaKnown RBP13.73□□□□□ -0.21
SLIRP-205ENST00000556310 HOXD10P28358 340 aa13.73□□□□□ -0.21
SLIRP-205ENST00000556310 MFAP1P55081 439 aaKnown RBP13.73□□□□□ -0.21
SLIRP-205ENST00000556310 PDE4BQ07343 736 aa13.73□□□□□ -0.21
SLIRP-205ENST00000556310 ALX1Q15699 326 aa13.73□□□□□ -0.21
SLIRP-205ENST00000556310 SIAH1Q8IUQ4 282 aa13.73□□□□□ -0.21
SLIRP-205ENST00000556310 STK11IPQ8N1F8 1099 aa13.73□□□□□ -0.21
SLIRP-205ENST00000556310 EFCAB3Q8N7B9 438 aa13.73□□□□□ -0.21
SLIRP-205ENST00000556310 LPAR1Q92633 364 aa13.73□□□□□ -0.21
SLIRP-205ENST00000556310 ARMC5Q96C12 935 aa13.73□□□□□ -0.21
SLIRP-205ENST00000556310 P2RX7Q99572 595 aaKnown RBP13.73□□□□□ -0.21
SLIRP-205ENST00000556310 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■□□□□ 10.5
SLIRP-205ENST00000556310 PLXNB2O15031 1838 aa13.72□□□□□ -0.21
SLIRP-205ENST00000556310 TNPO2O14787 897 aaKnown RBP13.72□□□□□ -0.21
SLIRP-205ENST00000556310 PRDM1O75626 825 aa13.72□□□□□ -0.21
SLIRP-205ENST00000556310 EEF2P13639 858 aaKnown RBP13.72□□□□□ -0.21
SLIRP-205ENST00000556310 TIE1P35590 1138 aa13.72□□□□□ -0.21
SLIRP-205ENST00000556310 CATSPERGQ6ZRH7 1159 aa13.72□□□□□ -0.21
SLIRP-205ENST00000556310 RPAP3Q9H6T3 665 aaPredicted RBP13.72□□□□□ -0.21
SLIRP-205ENST00000556310 VCPKMTQ9H867 229 aa13.72□□□□□ -0.21
SLIRP-205ENST00000556310 RYDENQ9NUL5 291 aaKnown RBP13.72□□□□□ -0.21
SLIRP-205ENST00000556310 ANAPC4Q9UJX5 808 aa13.72□□□□□ -0.21
SLIRP-205ENST00000556310 IGKV6D-41A0A0C4DH26 115 aa13.71□□□□□ -0.21
SLIRP-205ENST00000556310 HSPD1P10809 573 aaKnown RBP13.71□□□□□ -0.21
SLIRP-205ENST00000556310 PRKCZQ05513 592 aa13.71□□□□□ -0.21
SLIRP-205ENST00000556310 SLC9C1Q4G0N8 1177 aa13.71□□□□□ -0.21
SLIRP-205ENST00000556310 LBX2Q6XYB7 198 aa13.71□□□□□ -0.21
SLIRP-205ENST00000556310 ZNF444Q8N0Y2 327 aaPredicted RBP13.71□□□□□ -0.21
SLIRP-205ENST00000556310 TXNRD2Q9NNW7 524 aa13.71□□□□□ -0.21
SLIRP-205ENST00000556310 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.71□□□□□ -0.21
SLIRP-205ENST00000556310 KIAA0100Q14667 2235 aaKnown RBP13.7□□□□□ -0.22
SLIRP-205ENST00000556310 COL11A1P12107 1806 aaPredicted RBP13.7□□□□□ -0.22
SLIRP-205ENST00000556310 SPDYE16A6NNV3 312 aaPredicted RBP13.7□□□□□ -0.22
SLIRP-205ENST00000556310 WDR46O15213 610 aaKnown RBP13.7□□□□□ -0.22
SLIRP-205ENST00000556310 FGAP02671 866 aa13.7□□□□□ -0.22
SLIRP-205ENST00000556310 ERVK-9P63128 1117 aa13.7□□□□□ -0.22
SLIRP-205ENST00000556310 ERVK-24P63145 666 aa13.7□□□□□ -0.22
SLIRP-205ENST00000556310 ATP2B2Q01814 1243 aa13.7□□□□□ -0.22
SLIRP-205ENST00000556310 KIAA1755Q5JYT7 1200 aa13.7□□□□□ -0.22
SLIRP-205ENST00000556310 CWC27Q6UX04 472 aaKnown RBP13.7□□□□□ -0.22
SLIRP-205ENST00000556310 CENPQQ7L2Z9 268 aaPredicted RBP13.7□□□□□ -0.22
SLIRP-205ENST00000556310 GPRC5AQ8NFJ5 357 aa13.7□□□□□ -0.22
SLIRP-205ENST00000556310 RAET1EQ8TD07 263 aa13.7□□□□□ -0.22
SLIRP-205ENST00000556310 COA7Q96BR5 231 aa13.7□□□□□ -0.22
SLIRP-205ENST00000556310 TANGO6Q9C0B7 1094 aa13.7□□□□□ -0.22
SLIRP-205ENST00000556310 GOPCQ9HD26 462 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms