RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 LINC00114Q6XXX2 140 aa11.71□□□□□ -0.53
GTF2A1-204ENST00000556268 COPS6Q7L5N1 327 aa11.71□□□□□ -0.53
GTF2A1-204ENST00000556268 SAPCD2Q86UD0 394 aa11.71□□□□□ -0.53
GTF2A1-204ENST00000556268 GSX2Q9BZM3 304 aa11.71□□□□□ -0.53
GTF2A1-204ENST00000556268 TMX4Q9H1E5 349 aaPredicted RBP11.71□□□□□ -0.53
GTF2A1-204ENST00000556268 KDM3BQ7LBC6 1761 aa11.7□□□□□ -0.54
GTF2A1-204ENST00000556268 CHL1O00533 1208 aa11.7□□□□□ -0.54
GTF2A1-204ENST00000556268 ANXA1P04083 346 aa11.7□□□□□ -0.54
GTF2A1-204ENST00000556268 HCLS1P14317 486 aaPredicted RBP11.7□□□□□ -0.54
GTF2A1-204ENST00000556268 TMPOP42166 694 aaKnown RBP11.7□□□□□ -0.54
GTF2A1-204ENST00000556268 RGS19P49795 217 aa11.7□□□□□ -0.54
GTF2A1-204ENST00000556268 GMPSP49915 693 aaPredicted RBP11.7□□□□□ -0.54
GTF2A1-204ENST00000556268 NAA30Q147X3 362 aaPredicted RBP11.7□□□□□ -0.54
GTF2A1-204ENST00000556268 HSP90AB3PQ58FF7 597 aa11.7□□□□□ -0.54
GTF2A1-204ENST00000556268 CYP4F22Q6NT55 531 aa11.7□□□□□ -0.54
GTF2A1-204ENST00000556268 ADH7P40394 386 aa11.69□□□□□ -0.54
GTF2A1-204ENST00000556268 CIAPIN1Q6FI81 312 aa11.69□□□□□ -0.54
GTF2A1-204ENST00000556268 DPP8Q6V1X1 898 aaPredicted RBP11.69□□□□□ -0.54
GTF2A1-204ENST00000556268 TREML1Q86YW5 311 aa11.69□□□□□ -0.54
GTF2A1-204ENST00000556268 XAGE3Q8WTP9 111 aa11.69□□□□□ -0.54
GTF2A1-204ENST00000556268 DLG5Q8TDM6 1919 aa11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 CDHR2Q9BYE9 1310 aa11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 MAPK8IP3Q9UPT6 1336 aa11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 YDJCA8MPS7 323 aa11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 ALAS2P22557 587 aa11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 GRAPQ13588 217 aa11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 CCINQ13939 588 aa11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 TNIP1Q15025 636 aa11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 SF3B3Q15393 1217 aaKnown RBP11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 DDX46Q7L014 1031 aaKnown RBP11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 TMC4Q7Z404 712 aa11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 ETFBKMTQ8IXQ9 262 aa11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 KCTD17Q8N5Z5 321 aa11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 GRAPLQ8TC17 118 aaPredicted RBP11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 DPF2Q92785 391 aa11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 PNMA5Q96PV4 448 aa11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 TRMT112Q9UI30 125 aaKnown RBP11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 USP20Q9Y2K6 914 aa11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 LAMB4A4D0S4 1761 aa11.68□□□□□ -0.54
GTF2A1-204ENST00000556268 SH3TC1Q8TE82 1336 aa11.67□□□□□ -0.54
GTF2A1-204ENST00000556268 TNFRSF10BO14763 440 aa11.67□□□□□ -0.54
GTF2A1-204ENST00000556268 OPLAHO14841 1288 aa11.67□□□□□ -0.54
GTF2A1-204ENST00000556268 AOC2O75106 756 aa11.67□□□□□ -0.54
GTF2A1-204ENST00000556268 CELF2O95319 508 aaKnown RBP11.67□□□□□ -0.54
GTF2A1-204ENST00000556268 NFKB1P19838 968 aa11.67□□□□□ -0.54
GTF2A1-204ENST00000556268 TRIM28Q13263 835 aaKnown RBP11.67□□□□□ -0.54
GTF2A1-204ENST00000556268 RALBP1Q15311 655 aa11.67□□□□□ -0.54
GTF2A1-204ENST00000556268 FAM26DQ5JW98 314 aa11.67□□□□□ -0.54
GTF2A1-204ENST00000556268 CDC37L1Q7L3B6 337 aa11.67□□□□□ -0.54
GTF2A1-204ENST00000556268 ISCA1Q9BUE6 129 aa11.67□□□□□ -0.54
GTF2A1-204ENST00000556268 GLIS2Q9BZE0 524 aaPredicted RBP11.67□□□□□ -0.54
GTF2A1-204ENST00000556268 CNOT7Q9UIV1 285 aaKnown RBP11.67□□□□□ -0.54
GTF2A1-204ENST00000556268 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.67□□□□□ -0.54
GTF2A1-204ENST00000556268 GNB5O14775 395 aa11.66□□□□□ -0.54
GTF2A1-204ENST00000556268 CA12O43570 354 aa11.66□□□□□ -0.54
GTF2A1-204ENST00000556268 RAD17O75943 681 aa11.66□□□□□ -0.54
GTF2A1-204ENST00000556268 TBC1D8BQ0IIM8 1120 aa11.66□□□□□ -0.54
GTF2A1-204ENST00000556268 AIMP1Q12904 312 aaKnown RBP11.66□□□□□ -0.54
GTF2A1-204ENST00000556268 TRPM4Q8TD43 1214 aa11.66□□□□□ -0.54
GTF2A1-204ENST00000556268 UBE2OQ9C0C9 1292 aaKnown RBP11.66□□□□□ -0.54
GTF2A1-204ENST00000556268 SUV39H2Q9H5I1 410 aa11.66□□□□□ -0.54
GTF2A1-204ENST00000556268 EFCC1Q9HA90 598 aa11.66□□□□□ -0.54
GTF2A1-204ENST00000556268 H7C1D1 291 aa11.65□□□□□ -0.54
GTF2A1-204ENST00000556268 LMOD3Q0VAK6 560 aa11.65□□□□□ -0.54
GTF2A1-204ENST00000556268 KRT24Q2M2I5 525 aa11.65□□□□□ -0.54
GTF2A1-204ENST00000556268 USP48Q86UV5 1035 aa11.65□□□□□ -0.54
GTF2A1-204ENST00000556268 PLBD2Q8NHP8 589 aa11.65□□□□□ -0.54
GTF2A1-204ENST00000556268 BCL2L13Q9BXK5 485 aa11.65□□□□□ -0.54
GTF2A1-204ENST00000556268 SEPT3Q9UH03 358 aa11.65□□□□□ -0.54
GTF2A1-204ENST00000556268 STARD13Q9Y3M8 1113 aa11.65□□□□□ -0.54
GTF2A1-204ENST00000556268 SHTN1A0MZ66 631 aa11.64□□□□□ -0.55
GTF2A1-204ENST00000556268 HOXB7P09629 217 aa11.64□□□□□ -0.55
GTF2A1-204ENST00000556268 BRD2P25440 801 aaKnown RBP11.64□□□□□ -0.55
GTF2A1-204ENST00000556268 COL8A1P27658 744 aa11.64□□□□□ -0.55
GTF2A1-204ENST00000556268 KRT25Q7Z3Z0 450 aa11.64□□□□□ -0.55
GTF2A1-204ENST00000556268 RGL4Q8IZJ4 473 aa11.64□□□□□ -0.55
GTF2A1-204ENST00000556268 ARID3AQ99856 593 aa11.64□□□□□ -0.55
GTF2A1-204ENST00000556268 IGFLR1Q9H665 355 aa11.64□□□□□ -0.55
GTF2A1-204ENST00000556268 POLLQ9UGP5 575 aa11.64□□□□□ -0.55
GTF2A1-204ENST00000556268 CARNS1A5YM72 827 aa11.63□□□□□ -0.55
GTF2A1-204ENST00000556268 ALBP02768 609 aa11.63□□□□□ -0.55
GTF2A1-204ENST00000556268 SCNN1AP37088 669 aa11.63□□□□□ -0.55
GTF2A1-204ENST00000556268 CELF1Q92879 486 aaKnown RBP11.63□□□□□ -0.55
GTF2A1-204ENST00000556268 FAM89AQ96GI7 184 aa11.63□□□□□ -0.55
GTF2A1-204ENST00000556268 KCNQ5Q9NR82 932 aa11.63□□□□□ -0.55
GTF2A1-204ENST00000556268 ZFATQ9P243 1243 aa11.63□□□□□ -0.55
GTF2A1-204ENST00000556268 CHPF2Q9P2E5 772 aa11.63□□□□□ -0.55
GTF2A1-204ENST00000556268 TRPM7Q96QT4 1865 aa11.63□□□□□ -0.55
GTF2A1-204ENST00000556268 THSD7BQ9C0I4 1608 aa11.63□□□□□ -0.55
GTF2A1-204ENST00000556268 M0R082 166 aa11.62□□□□□ -0.55
GTF2A1-204ENST00000556268 PIK3R2O00459 728 aa11.62□□□□□ -0.55
GTF2A1-204ENST00000556268 PSMD14O00487 310 aa11.62□□□□□ -0.55
GTF2A1-204ENST00000556268 VIL1P09327 827 aaKnown RBP11.62□□□□□ -0.55
GTF2A1-204ENST00000556268 RPS12P25398 132 aaKnown RBP11.62□□□□□ -0.55
GTF2A1-204ENST00000556268 RPS8P62241 208 aaKnown RBP11.62□□□□□ -0.55
GTF2A1-204ENST00000556268 NOGQ13253 232 aa11.62□□□□□ -0.55
GTF2A1-204ENST00000556268 GRM1Q13255 1194 aa11.62□□□□□ -0.55
GTF2A1-204ENST00000556268 DLK2Q6UY11 383 aa11.62□□□□□ -0.55
GTF2A1-204ENST00000556268 ZNF417Q8TAU3 575 aa11.62□□□□□ -0.55
GTF2A1-204ENST00000556268 ZNF587Q96SQ5 575 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms