RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 PCMTD1Q96MG8 357 aaPredicted RBP10.67□□□□□ -0.7
CHD8-210ENST00000555962 PTPN18Q99952 460 aa10.67□□□□□ -0.7
CHD8-210ENST00000555962 ANAPC4Q9UJX5 808 aa10.67□□□□□ -0.7
CHD8-210ENST00000555962 KCNH4Q9UQ05 1017 aa10.67□□□□□ -0.7
CHD8-210ENST00000555962 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.67□□□□□ -0.7
CHD8-210ENST00000555962 RLFQ13129 1914 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 CCL15-CCL14A0A0B4J2E2 113 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 MANSC4A6NHS7 340 aaPredicted RBP10.66□□□□□ -0.7
CHD8-210ENST00000555962 TRIM75PA6NK02 468 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 USP17L5A8MUK1 530 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 IGF2BP3O00425 579 aaKnown RBP eCLIP10.66□□□□□ -0.7
CHD8-210ENST00000555962 MPHOSPH10O00566 681 aaKnown RBP10.66□□□□□ -0.7
CHD8-210ENST00000555962 TM4SF4P48230 202 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 GTF2A2P52657 109 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 SPP2Q13103 211 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 DGKZQ13574 1117 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 MOGSQ13724 837 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 SEPT2Q15019 361 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 CCL15Q16663 113 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 TBC1D10CQ8IV04 446 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 NKX2-3Q8TAU0 364 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 BRI3BPQ8WY22 251 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.66□□□□□ -0.7
CHD8-210ENST00000555962 REPIN1Q9BWE0 567 aaKnown RBP10.66□□□□□ -0.7
CHD8-210ENST00000555962 LSG1Q9H089 658 aaKnown RBP10.66□□□□□ -0.7
CHD8-210ENST00000555962 NPDC1Q9NQX5 325 aaPredicted RBP10.66□□□□□ -0.7
CHD8-210ENST00000555962 GINM1Q9NU53 330 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 WBP1LQ9NX94 342 aa10.66□□□□□ -0.7
CHD8-210ENST00000555962 CXCL11O14625 94 aa10.65□□□□□ -0.7
CHD8-210ENST00000555962 FGRP09769 529 aa10.65□□□□□ -0.7
CHD8-210ENST00000555962 C7P10643 843 aa10.65□□□□□ -0.7
CHD8-210ENST00000555962 CLCN1P35523 988 aa10.65□□□□□ -0.7
CHD8-210ENST00000555962 SNAPC2Q13487 334 aa10.65□□□□□ -0.7
CHD8-210ENST00000555962 RAB3GAP1Q15042 981 aa10.65□□□□□ -0.7
CHD8-210ENST00000555962 SIAH1Q8IUQ4 282 aa10.65□□□□□ -0.7
CHD8-210ENST00000555962 ZNF280CQ8ND82 737 aa10.65□□□□□ -0.7
CHD8-210ENST00000555962 SP7Q8TDD2 431 aaPredicted RBP10.65□□□□□ -0.7
CHD8-210ENST00000555962 ACER1Q8TDN7 264 aa10.65□□□□□ -0.7
CHD8-210ENST00000555962 CCDC17Q96LX7 622 aa10.65□□□□□ -0.7
CHD8-210ENST00000555962 WDR18Q9BV38 432 aa10.65□□□□□ -0.7
CHD8-210ENST00000555962 MKNK2Q9HBH9 465 aa10.65□□□□□ -0.7
CHD8-210ENST00000555962 CABP5Q9NP86 173 aa10.65□□□□□ -0.7
CHD8-210ENST00000555962 A0A0G2JLL6 359 aaPredicted RBP10.64□□□□□ -0.71
CHD8-210ENST00000555962 A0A1W2PRG0 241 aa10.64□□□□□ -0.71
CHD8-210ENST00000555962 POTEFA5A3E0 1075 aa10.64□□□□□ -0.71
CHD8-210ENST00000555962 ORC4O43929 436 aa10.64□□□□□ -0.71
CHD8-210ENST00000555962 SLC3A2P08195 630 aaKnown RBP10.64□□□□□ -0.71
CHD8-210ENST00000555962 CETPP11597 493 aa10.64□□□□□ -0.71
CHD8-210ENST00000555962 MAP2K1Q02750 393 aaPredicted RBP10.64□□□□□ -0.71
CHD8-210ENST00000555962 PDE4BQ07343 736 aa10.64□□□□□ -0.71
CHD8-210ENST00000555962 SREBF2Q12772 1141 aa10.64□□□□□ -0.71
CHD8-210ENST00000555962 FAM47AQ5JRC9 791 aa10.64□□□□□ -0.71
CHD8-210ENST00000555962 GPAT2Q6NUI2 795 aa10.64□□□□□ -0.71
CHD8-210ENST00000555962 TMEM179Q6ZVK1 233 aa10.64□□□□□ -0.71
CHD8-210ENST00000555962 PRRT2Q7Z6L0 340 aaPredicted RBP10.64□□□□□ -0.71
CHD8-210ENST00000555962 ZNF444Q8N0Y2 327 aaPredicted RBP10.64□□□□□ -0.71
CHD8-210ENST00000555962 FAM43AQ8N2R8 423 aa10.64□□□□□ -0.71
CHD8-210ENST00000555962 MAP4K1Q92918 833 aa10.64□□□□□ -0.71
CHD8-210ENST00000555962 AS3MTQ9HBK9 375 aa10.64□□□□□ -0.71
CHD8-210ENST00000555962 RNF186Q9NXI6 227 aa10.64□□□□□ -0.71
CHD8-210ENST00000555962 RBM8AQ9Y5S9 174 aaKnown RBP10.64□□□□□ -0.71
CHD8-210ENST00000555962 TAF6LQ9Y6J9 622 aa10.64□□□□□ -0.71
CHD8-210ENST00000555962 MGAMO43451 1857 aa10.64□□□□□ -0.71
CHD8-210ENST00000555962 ZSWIM8A7E2V4 1837 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 COL11A1P12107 1806 aaPredicted RBP10.63□□□□□ -0.71
CHD8-210ENST00000555962 NEDD4P46934 1319 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 IGKV6D-41A0A0C4DH26 115 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 BTBD19C9JJ37 291 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 USP17L10C9JJH3 530 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 ZNF213O14771 459 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 CYP21A2P08686 494 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 HSPA1AP0DMV8 641 aaKnown RBP10.63□□□□□ -0.71
CHD8-210ENST00000555962 HSPA1BP0DMV9 641 aaKnown RBP10.63□□□□□ -0.71
CHD8-210ENST00000555962 HMGCS2P54868 508 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 BACE1P56817 501 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 INHBEP58166 350 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 TFAP4Q01664 338 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 MTMR2Q13614 643 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 SH3D19Q5HYK7 790 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 AKNAD1Q5T1N1 836 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 NEDD1Q8NHV4 660 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 STAG1Q8WVM7 1258 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 TBC1D2Q9BYX2 928 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 ZNF287Q9HBT7 754 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 ANO2Q9NQ90 1003 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 CTNNA3Q9UI47 895 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 TSKSQ9UJT2 592 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 DOCK3Q8IZD9 2030 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 PLIN4Q96Q06 1357 aa10.63□□□□□ -0.71
CHD8-210ENST00000555962 FOXN1O15353 648 aa10.62□□□□□ -0.71
CHD8-210ENST00000555962 RANBP6O60518 1105 aaKnown RBP10.62□□□□□ -0.71
CHD8-210ENST00000555962 TRPA1O75762 1119 aa10.62□□□□□ -0.71
CHD8-210ENST00000555962 EEF2P13639 858 aaKnown RBP10.62□□□□□ -0.71
CHD8-210ENST00000555962 MDM2Q00987 491 aaPredicted RBP10.62□□□□□ -0.71
CHD8-210ENST00000555962 ICA1Q05084 483 aa10.62□□□□□ -0.71
CHD8-210ENST00000555962 ZYXQ15942 572 aaKnown RBP10.62□□□□□ -0.71
CHD8-210ENST00000555962 IMMTQ16891 758 aaKnown RBP10.62□□□□□ -0.71
CHD8-210ENST00000555962 RRP12Q5JTH9 1297 aaKnown RBP10.62□□□□□ -0.71
CHD8-210ENST00000555962 KIAA1755Q5JYT7 1200 aa10.62□□□□□ -0.71
CHD8-210ENST00000555962 TREML2Q5T2D2 321 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms