RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 PTPREP23469 700 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 CDK8P49336 464 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 FXR1P51114 621 aaKnown RBP eCLIP15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 ICA1Q05084 483 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 TRIM32Q13049 653 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 GRB14Q14449 540 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 SLFNL1Q499Z3 407 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 SBK1Q52WX2 424 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 CTR9Q6PD62 1173 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 SIAH1Q8IUQ4 282 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 SHCBP1Q8NEM2 672 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 DYNLL2Q96FJ2 89 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 PAWRQ96IZ0 340 aaKnown RBP15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 NBPF3Q9H094 633 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 PRO3102Q9H379 93 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 BTBD7Q9P203 1132 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 SLC4A4Q9Y6R1 1079 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 A0A0G2JMZ2 1700 aa15.26■□□□□ 0.03
HNRNPC-221ENST00000555883 MYH7P12883 1935 aa15.25■□□□□ 0.03
HNRNPC-221ENST00000555883 WDR46O15213 610 aaKnown RBP15.25■□□□□ 0.03
HNRNPC-221ENST00000555883 STRNO43815 780 aa15.25■□□□□ 0.03
HNRNPC-221ENST00000555883 EVI5O60447 810 aa15.25■□□□□ 0.03
HNRNPC-221ENST00000555883 AKR1B1P15121 316 aa15.25■□□□□ 0.03
HNRNPC-221ENST00000555883 MNX1P50219 401 aaPredicted RBP15.25■□□□□ 0.03
HNRNPC-221ENST00000555883 CACNB2Q08289 660 aaPredicted RBP15.25■□□□□ 0.03
HNRNPC-221ENST00000555883 LRRFIP1Q32MZ4 808 aaKnown RBP15.25■□□□□ 0.03
HNRNPC-221ENST00000555883 APPBP2Q92624 585 aa15.25■□□□□ 0.03
HNRNPC-221ENST00000555883 STRBPQ96SI9 672 aaKnown RBP15.25■□□□□ 0.03
HNRNPC-221ENST00000555883 BCL11AQ9H165 835 aa15.25■□□□□ 0.03
HNRNPC-221ENST00000555883 VCPKMTQ9H867 229 aa15.25■□□□□ 0.03
HNRNPC-221ENST00000555883 KANSL2Q9H9L4 492 aa15.25■□□□□ 0.03
HNRNPC-221ENST00000555883 CWC22Q9HCG8 908 aaKnown RBP15.25■□□□□ 0.03
HNRNPC-221ENST00000555883 IVNS1ABPQ9Y6Y0 642 aa15.25■□□□□ 0.03
HNRNPC-221ENST00000555883 ROBO3Q96MS0 1386 aa15.24■□□□□ 0.03
HNRNPC-221ENST00000555883 ZNF236Q9UL36 1845 aa15.24■□□□□ 0.03
HNRNPC-221ENST00000555883 CEP290O15078 2479 aa15.24■□□□□ 0.03
HNRNPC-221ENST00000555883 A0A1W2PPC1 479 aa15.24■□□□□ 0.03
HNRNPC-221ENST00000555883 IGHA2P01877 340 aa15.24■□□□□ 0.03
HNRNPC-221ENST00000555883 CHGBP05060 677 aa15.24■□□□□ 0.03
HNRNPC-221ENST00000555883 GNAT2P19087 354 aa15.24■□□□□ 0.03
HNRNPC-221ENST00000555883 TANGO6Q9C0B7 1094 aa15.24■□□□□ 0.03
HNRNPC-221ENST00000555883 GSG1L2A8MUP6 293 aa15.23■□□□□ 0.03
HNRNPC-221ENST00000555883 ERC2O15083 957 aa15.23■□□□□ 0.03
HNRNPC-221ENST00000555883 RNF113AO15541 343 aaKnown RBP15.23■□□□□ 0.03
HNRNPC-221ENST00000555883 MSCO60682 206 aa15.23■□□□□ 0.03
HNRNPC-221ENST00000555883 DSG3P32926 999 aa15.23■□□□□ 0.03
HNRNPC-221ENST00000555883 CCL14Q16627 93 aa15.23■□□□□ 0.03
HNRNPC-221ENST00000555883 MFSD14CQ5VZR4 134 aa15.23■□□□□ 0.03
HNRNPC-221ENST00000555883 LHX8Q68G74 356 aa15.23■□□□□ 0.03
HNRNPC-221ENST00000555883 CHRDL2Q6WN34 429 aa15.23■□□□□ 0.03
HNRNPC-221ENST00000555883 ABRAQ8N0Z2 381 aa15.23■□□□□ 0.03
HNRNPC-221ENST00000555883 DIS3LQ8TF46 1054 aaKnown RBP15.23■□□□□ 0.03
HNRNPC-221ENST00000555883 MOV10L1Q9BXT6 1211 aaKnown RBP15.23■□□□□ 0.03
HNRNPC-221ENST00000555883 SPATC1LQ9H0A9 340 aa15.23■□□□□ 0.03
HNRNPC-221ENST00000555883 CYP2D7A0A087X1C5 515 aa15.22■□□□□ 0.03
HNRNPC-221ENST00000555883 KIAA1755Q5JYT7 1200 aa15.22■□□□□ 0.03
HNRNPC-221ENST00000555883 OLFML2BQ68BL8 750 aa15.22■□□□□ 0.03
HNRNPC-221ENST00000555883 OSBP2Q969R2 916 aa15.22■□□□□ 0.03
HNRNPC-221ENST00000555883 MROH8Q9H579 483 aa15.22■□□□□ 0.03
HNRNPC-221ENST00000555883 C11orf49Q9H6J7 331 aa15.22■□□□□ 0.03
HNRNPC-221ENST00000555883 ADAMTS5Q9UNA0 930 aa15.22■□□□□ 0.03
HNRNPC-221ENST00000555883 PCDHB15Q9Y5E8 787 aa15.22■□□□□ 0.03
HNRNPC-221ENST00000555883 RLFQ13129 1914 aa15.21■□□□□ 0.03
HNRNPC-221ENST00000555883 BAZ2AQ9UIF9 1905 aaKnown RBP15.21■□□□□ 0.03
HNRNPC-221ENST00000555883 FLOT1O75955 427 aa15.21■□□□□ 0.03
HNRNPC-221ENST00000555883 COL6A1P12109 1028 aa15.21■□□□□ 0.03
HNRNPC-221ENST00000555883 EEF2P13639 858 aaKnown RBP15.21■□□□□ 0.03
HNRNPC-221ENST00000555883 WDR78Q5VTH9 848 aa15.21■□□□□ 0.03
HNRNPC-221ENST00000555883 ZNF287Q9HBT7 754 aa15.21■□□□□ 0.03
HNRNPC-221ENST00000555883 GOPCQ9HD26 462 aa15.21■□□□□ 0.03
HNRNPC-221ENST00000555883 RBM27Q9P2N5 1060 aaKnown RBP15.21■□□□□ 0.03
HNRNPC-221ENST00000555883 SYNPO2Q9UMS6 1093 aa15.21■□□□□ 0.03
HNRNPC-221ENST00000555883 MYH8P13535 1937 aa15.21■□□□□ 0.02
HNRNPC-221ENST00000555883 GREB1LQ9C091 1923 aaPredicted RBP15.2■□□□□ 0.02
HNRNPC-221ENST00000555883 SMIM22K7EJ46 135 aa15.2■□□□□ 0.02
HNRNPC-221ENST00000555883 GPAA1O43292 621 aa15.2■□□□□ 0.02
HNRNPC-221ENST00000555883 SLC25A27O95847 323 aa15.2■□□□□ 0.02
HNRNPC-221ENST00000555883 ERCC3P19447 782 aa15.2■□□□□ 0.02
HNRNPC-221ENST00000555883 ADORA2AP29274 412 aa15.2■□□□□ 0.02
HNRNPC-221ENST00000555883 CCND3P30281 292 aaPredicted RBP15.2■□□□□ 0.02
HNRNPC-221ENST00000555883 RRP1P56182 461 aaKnown RBP15.2■□□□□ 0.02
HNRNPC-221ENST00000555883 ATP2B2Q01814 1243 aa15.2■□□□□ 0.02
HNRNPC-221ENST00000555883 CLEC10AQ8IUN9 316 aa15.2■□□□□ 0.02
HNRNPC-221ENST00000555883 PI4K2BQ8TCG2 481 aa15.2■□□□□ 0.02
HNRNPC-221ENST00000555883 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.2■□□□□ 0.02
HNRNPC-221ENST00000555883 SLC5A4Q9NY91 659 aa15.2■□□□□ 0.02
HNRNPC-221ENST00000555883 FLRT1Q9NZU1 646 aa15.2■□□□□ 0.02
HNRNPC-221ENST00000555883 NYAP2Q9P242 653 aa15.2■□□□□ 0.02
HNRNPC-221ENST00000555883 RASA1P20936 1047 aa15.19■□□□□ 0.02
HNRNPC-221ENST00000555883 COPB2P35606 906 aa15.19■□□□□ 0.02
HNRNPC-221ENST00000555883 DPP9Q86TI2 863 aa15.19■□□□□ 0.02
HNRNPC-221ENST00000555883 SPICE1Q8N0Z3 855 aa15.19■□□□□ 0.02
HNRNPC-221ENST00000555883 NPLOC4Q8TAT6 608 aa15.19■□□□□ 0.02
HNRNPC-221ENST00000555883 ATG4CQ96DT6 458 aa15.19■□□□□ 0.02
HNRNPC-221ENST00000555883 DDX20Q9UHI6 824 aaKnown RBP15.19■□□□□ 0.02
HNRNPC-221ENST00000555883 SZT2Q5T011 3432 aa15.19■□□□□ 0.02
HNRNPC-221ENST00000555883 PFASO15067 1338 aa15.18■□□□□ 0.02
HNRNPC-221ENST00000555883 SALL3Q9BXA9 1300 aa15.18■□□□□ 0.02
HNRNPC-221ENST00000555883 PATL2C9JE40 543 aaKnown RBP15.18■□□□□ 0.02
HNRNPC-221ENST00000555883 CYBAP13498 195 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms